ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9730735 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◣ SRX9730735: THP-1

◢ CDK9: STRING

ARL4D
WDR74
STX5
PABPC4
UBC
EAPP
TAF12
H4C6
H1-3
H3C6
H4C7
H3C7
NFYC
KIF2C
H1-2
H3C3
SLC3A2
H4C3
H1-6
H4C12
H4C11
H2BC14
H2AC14
ZNFX1
EGR1
SRSF3
H2BC15
H2AC15
H3C13
H2BC18
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZMPSTE24
TMCO2
H4C15
YBX1
TMEM107
HSP90AB1
SLC35B2
PARP16
MAT2A
KLF7
CITED4
H3-2
HSPA1B
NDUFAF3
IMPDH2
DALRD3
EIF4A2
H2BC21
H2AC21
H2AC20
EEF1A1
RPL10
DNASE1L1
H4C2
H3C2
H2AC4
H4C1
EIF1
H1-10
MAMDC2
ZFP69
TUBA1B
RPLP0
GCN1
EXO5
ID1
SRSF7
SIRT4
CD68
EIF4A1
PPIA
LOC100996842
H3C1
H1-1
HNRNPAB
RPL10A
H2BC8
H2AC8
CTPS1
H2AX
DPAGT1
FUS
HMBS
MCL1
TRIT1
ZBTB37
RPL12
LRSAM1
TXNIP
STX10
IER2
PRDX2
JUNB
SLC39A10
H2BC5
H1-4
SLC16A3
PABPC1
ZNF124
H4C4
H2BC6
FASN
CCDC30
ZMYND12
PPCS
CFD
ELANE
H2BC3
TRAF7
RAB26
ID2
H4C9
H2BC12
H2AC12
ACTRT3
MYNN
FAM166A
STPG3
TUBB4B
H2BC11
H2AC11
PPP1R10
MRPS18B
ATAT1
GPX1
UQCC3
LBHD1
CSKMT
C11orf98
NFKBIL1
DDX39B
ATP6V1G2
PNP
PIP4P1
POLG2
DDX5
CEP95
TIMP3
RAB13
RPS27
SEPHS2
ATF4
HSPB1
HNRNPH1
NASP
P4HB
MS4A7
CALR
RAD23A
FARSA
MFSD11
METTL23
SRSF2
JMJD6
CA2
H2BC9
H4C8
UNK
H3-3B
TNFSF9
EEF2
S100A4
S100A5
S100A6
S100A3
LAPTM5
ZBTB4
SLC35G6
POLR2A
FTL
RPS11
RPL13A
PTMA
RPS3
RCC1
HNRNPA2B1
CBX3
NFKBIA
PARP2
CCNB1IP1
PRRC2A
AIF1
NCL
BBC3
HMGB2
H2AZ1
DNAJB14
CEBPA
TKTL1
TEX28
REEP4
PPIF
FOS
H3C8
H2BC10
ZNF669
TUBB
MDC1
RPL5
H3C4
DNAJB4
ZFP36
PLEKHG2
C19orf48
SMAP2
ATAD2
RPLP1
RPS20
STAT1
TEDDM1
GLUL
TRIM27
SLC25A11
RNF167
PFN1
ENO3
H1-0
GCAT
C6orf62
ZNF670
CIRBP
FAM174C
INO80D
POLDIP3
RRM2
RPS8
TAF1D
C11orf54
IL4I1
NUP62
ATF5
RBM14-RBM4
RBM14
TMSB4X
PCBP2
PCIF1
H2BC4
H2AC6
ZNF93
CAP1
CITED2
ZC3H10
RPL41
GRB2
CDC20
ELOVL1
MUS81
CFL1
ACTG1
ST3GAL3
RBMX
MBNL1
MFSD2A
MYH9
RPS6
H4C13
H3C11
H2AC16
H1-5
SLC38A2
PPT1
VPS52
RPS18
B3GALT4
VPS29
RAD9B
EIF5
HSPA8
HMGN2
TASL
S100A13
S100A1
CHTOP
COQ8A
GBA
ERMAP
YWHAH
SVBP
C22orf24
LUC7L2
AHCTF1
INTS6
ACTN1
LMNB1
ZNF684
CGAS
MTO1
IBA57
H2BS1
H2BU1
H2AW
RNF220
H2AC7
H4C5
H2BC7
RPS23
ATP6AP1L
NSD2
TUBA1C
TUSC1
ANKRD13D
TBL3
RPS2
RNF151
NDUFB10
RPL3L
C6orf226
MARCHF7
PPIE
CYCS
ZNF438
SUPT5H
RPS16
VASP
PPM1N
HEXIM2
GDI2
LDHA
USP4
CBX5
HNRNPA1
NPM1
FAM200B
TRA2B
HYLS1
JMJD1C
PRKCD
CTBS
SDE2
GLO1
E2F3
SRSF6
FBXO28
PDLIM7
COL9A2
SELENOT
LMNA
PTBP1
PPP2R5D
PEX6
SRGN
ZBTB45
TRIM28
H2BC17
H2AC17
H3C12
CLTA
PTGER4
DPYSL2
PTPN6
C12orf57
RLF
HSPA5
DDX59
NPIPA3
NPIPA2
PLA2G10
RPL3
ZNF92
GTF2A1
PRR25
GNG13
TP53BP2
DENND4B
OARD1
NFYA
GAPDH
LAT2
TPM3
IRF1
TEX30
DESI2
SRP9
ADAMTS1
TSPOAP1
SPI1
HMGB1
ZNF143
NRROS
ANP32E
SZT2
MED8
CYBA
BZW1
NSMAF
AGPAT2
H3C10
H2BC13
H2AC13
ARF1
TMEM70
ELOC
COX18
AZIN1
CCDC85B
VPS28
FOSL1
SRSF5
SF1
ZSCAN31
IRF8
TRIM11
TRIM17
LOC730098
CCL27
DDX3X
MEF2D
KIF5B
FOXP1
SMURF2
CCNL1
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
TBCC
BICRAL
RPS29
NLRX1
ZNF691
PDCD6
CALM2
DDX19B
AARS1
DCAF12
MATR3
SURF2
SURF1
RPL7A
MED22
ATP23
TMBIM4
MACROH2A1
PMAIP1
RPL17-C18orf32
RPL17
C18orf32
RPS10-NUDT3
RPS10
TARDBP
EIF4G2
NDUFV3
MIA3
TAOK1
PKMYT1
FAM133B
NCOA5
CLSPN
SLFN11
RFX3
ZNF274
MLLT11
GABPB2
ZWILCH
SNAPC5
RPL4
CDC42SE1
ENO1
ZFAND3
TFRC
TMEM69
GPBP1L1
DGUOK
MSN
SCMH1
LOC102724770
DGCR6
DPH2
B4GALT2
ATP6V0B
RNASEK
C17orf49
BCL6B
ANP32B
ADPGK
RPS19
TOMM20
ZNF672
UHRF2
RPLP2
PNPLA2
PIDD1
RELT
RPL30
LY6G6F-LY6G6D
LY6G6F
ABHD16A
METTL21A
ZC3H6
TPT1
NUCKS1
RPL32
RPS3A
SLC20A1
CC2D1B
HNRNPA3
LAIR1
MS4A6A
RPS15A
TCTEX1D1
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
ZNF696
CAPRIN1
PBLD
HNRNPH3
OAZ1
MCM7
AP4M1
LDHB
GMNN
SLC39A7
RXRB
RING1
HSD17B8
FUCA2
ZNF253
DUX4
UBE2D3
NLRP3
NEK8
RPL23A
TLCD1
RAB34
PROCA1
BAZ1A
MAF1
CYC1
HNRNPUL1
SGK3
SNX33
IMP3
NKIRAS1
RPL15
EDF1
ARF6
ZFP69B
UNKL
RXFP4
KHDC4
BAG6
JUND
IQCN
OXLD1
CCDC137
GADD45B
CLK1
ZC3H4
ZNF451
SLC22A16
UBA52
HSPA9
ZCCHC3
C20orf96
CHST11
ARHGAP35
AP2S1
P2RY2
MAN2C1
SART1
NACA
ZNF273
MYBL2
UBE2L3
TPM4
S100A11
LEMD2
XKR9
LACTB2
UBE2I
ZNF517
ZNF34
RPL8
H3-3A
FOXD1
ZFAND5
TMPO
CD19
RABEP2
TRIP4
PCLAF
TOB2
UCHL5
RO60
GTF2IRD2
GPR160
SLC26A8
MAPK14
CCSAP
RBM39
CEBPG
LAT
SPNS1
MDM4
NARF
CYBC1
NBN
RPS12
SREBF1
ATXN2L
RPL27A
SLC27A3
ERLIN2
UBXN1
STIL
MYC
MYBPH
CHI3L1
RPL21
FBXO4
NEMP2
SP9
FBXO5
REXO5
ERI2
TMEM167B
PAK2
CCDC200
TOR4A
SLC25A3
COQ2
GOLPH3
EFCAB2
NRL
HSP90AA1
PCK2
TPCN1
IQCD
NSRP1
RCC2
ACTB
RPS27A
CLHC1
ZBED4
CFLAR
CTNNB1
ILF3
QSER1
DNAJC1
MYLIP
RPSA
DGKA
PYM1
PRRG2
NOSIP
PRR12
STMN1
PIGL
NCOR1
NUDT18
TCTA
RHOA
RBM12B
PDCD6IP
SREK1
RUNX1
TMED5
CCDC18
MRC2
HSPE1-MOB4
HSPE1
HSPD1
PPP1CC
UBAP2L
C1orf43
HENMT1
HNF4G
MYL6B
MYL6
NOP58
RACK1
MCRIP2
METTL26
HNRNPU
FSCN1
WDR90
FADD
PDE7A
SLC25A5
RC3H1
MYL12A
RNPEP
BOLA2-SMG1P6
C6orf89
TAGLN2
PKNOX1
RPL26
KRBA2
PPIL1
PSEN1
RPS26
SRCAP
LOC730183
PUF60
TRIM13
BVES
TRAPPC4
RPS25
SLTM
SUPT3H
RNPEPL1
DUSP28
ANKMY1
NUDT4B
NUDT4
AP1S3
RHOB
NFX1
NRDC
CELF2
SLC1A5
ACTR2
EZH2
ZNF131
TRAM2
RMI1
HNRNPK
PPP1R15B
RXRA
KAT7
DDX50
GNG14
DHPS
KPNA1
RIPK1
DHX9
RPL7L1
ARHGEF2
YWHAG
ARF4
RBM25
STARD7
RPL23
PRTN3
EIF2S2
NUDCD2
HMMR
GMEB1
GRK2
POLG
SLC25A10
MRPL12
HNRNPL
TSPAN10
NPLOC4
SACM1L
DNAJB1
EIF3A
RPL36AL
MGAT2
CEP192
TPI1
SPSB2
ADGRE5
ZNF200
GNAI2
TBRG4
RABGGTB
MSH4
IPP
UCK2
IRAK3
RPL18A
SERP1
EIF2A
C9orf85
ABHD17B
IL17RA
SLC25A6
DNPH1
MOB4
C16orf72
LYN
SLC39A1
CREB3L4
PKM
JTB
PAF1
MED29
SDCBP
YTHDF3
RAC1
HNRNPDL
ENOPH1
KRCC1
HSPA4
ZNF280D
SMIM19
SLC20A2
ANXA5
CKS2
SECISBP2
GABPB1
PTEN
KLLN
TCERG1
KLF10
TRIM25
DOCK8
ZNF700
ATXN7L3
WDR4
SNRPD1
RPS15
UGP2
IMMT
MRPL35
STT3B
ZBTB25
ZBTB1
RGS16
PTPN7
SPHK2
RPL18
FAM83E
NSF
C9orf64
PPP4C
ALDOA
RBM8A
PEX11B
U2AF1L5
U2AF1
TOE1
MUTYH
LSM8
PAIP1
NNT
KLHL15
KCNQ4
NSUN4
RNASEH2B
AVEN
DDX60L
TOMM6
PRICKLE4
FRS3
SFT2D3
YWHAZ
ETFRF1
CFAP94
HDGF
MRPL24
IDI1
WDR37
CMC1
BCOR
PRCC
CANX
C2orf69
HMGA1
DDX39A
ZNF695
DYNC1H1
ELOB
LAMTOR1
PRSS33
PLEKHA4
ANAPC15
PPP1R15A
RPL22
RNF207
C12orf65
WDR82
GLYCTK
NOCT
ABTB1
TRIM52
GATAD1
RIC8A
BET1L
RNF135
SPPL2A
TGFBRAP1
C2orf49
PRRT2
MAZ
FAM43A
CSE1L
PUM1
PAGR1
BRPF3
COX7A2
TYMSOS
TYMS
CENPC
PLK4
HYI
LOC100287896
LIPT2
CPT2
ATL3
MRPL2
KLC4
CUL7
TOPORS
SMIM27
ZBTB22
TAPBP
DAXX
SQSTM1
SNRPG
FAM136A
ERV3-1-ZNF117
ERV3-1
SRSF1
MBD6
DDIT3
MTCH1
CACNB2
ZKSCAN2
TUBGCP3
SUMO2
CARD9
DNLZ
MOB1A
ACOT2
PRDX1
MFSD14B
PPIH
TMEM190
TMEM238
RPL28
RBBP6
SF3B3
COG4
SCAF11
UBA2
MSH6
ANAPC7
SINHCAF
N4BP2
DIP2A
NUDT15
DDX17
NDUFB1
CPSF2
AFG3L2
PPDPF
RPL35
ARPC5L
PSMB8
SMARCB1
TAP1
PSMB9
TAP2
LRIF1
ANKRD45
MTF2
EIF4B
COPS3
HMGN1
PFKL
THSD7A
GMIP
MAD2L1BP
GTPBP2
CDKN2C
FAF1
PSMD8
TPRN
TMEM203
NDOR1
SFPQ
P3H1
USPL1
EIF3L
ANKRD54
GGNBP2
MYO19
HNRNPA0
CREBZF
PI4KB
ODC1
PLPPR3
AZU1
SLC9A1
SELENOH
VDAC2
MKNK2
WDFY1
BTBD18
CYTH2
CDC37L1
BNIP2
PCF11
STXBP3
TBL2
XPOT
MORF4L1