ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244177 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◣ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NAA80
IFRD2
HYAL3
PHB
BOD1
NPRL2
TMEM115
CYB561D2
TCEA2
TMTC3
CEP290
CLPB
PAFAH2
FASTKD1
CALR3
C19orf44
SMPD3
ORMDL3
GSDMB
GDE1
CCP110
PPRC1
GPBAR1
PNKD
AAMP
ZNF225
UBE2T
PPP1R12B
DEXI
CLEC16A
INVS
ERP44
COX7C
DDX23
PANK4
HES5
ODF3L2
MADCAM1
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ST3GAL2
TTC13
ARV1
ZNF189
MRPL50
CHMP4B
MED15
STAU1
ZNF749
LARS1
SCRIB
ZFYVE28
CFAP99
UBAC1
RPIA
TESK2
MMACHC
KBTBD6
UCKL1
GSPT1
CTF1
BCL7C
SYMPK
FOXA3
SLC39A1
CREB3L4
CRTC2
NUDCD1
NTAN1
BTRC
TTC33
CTU1
AHCYL2
PPP1R12C
TSNAXIP1
RANBP10
SLC35B4
MRI1
C19orf53
STK25
ZNF517
ZNF34
RPL8
PYCR3
GFUS
ZNF169
ARHGAP35
AP2S1
NOP14
GRK4
WDR87
SIPA1L3
TNFAIP1
IFT20
C1orf159
SV2A
BOLA1
CHPF2
ABCF2-H2BE1
ABCF2
CBARP
MIDN
ATP5F1D
ING4
UNKL
C16orf91
PERCC1
TMEM127
CIAO1
PEMT
LRRC29
TFEB
CDCA3
ZSCAN22
MAD2L1BP
GTPBP2
ZNF513
SNX17
EIF2B4
TRAPPC3
MAP7D1
ZFYVE1
ATP5PO
BUB1B
ZNF235
ZNF420
ZNF56
RPL36
MICOS13
HSD11B1L
PHF12
TMEM59
TCEANC2
RASSF1
ZMYND10
KBTBD7
RALBP1
DYNC1I2
UBQLN4
RAB25
LAMTOR2
SMUG1
WNK1
TSC2
NTHL1
UNK
H3-3B
SMARCAL1
BANP
SNX27
GATB
FBXO46
MEIOSIN
TIMM21
FBXO15
TSSC4
CNIH4
TMEM11
HDGF
MRPL24
SLC4A2
CDK5
ASIC3
OSCAR
NDUFA3
NFXL1
ZNF337
TRAK2
STRADB
AP2M1
THRAP3
ZFYVE19
DNAJC17
DESI2
SCAF1
RRAS
NDUFS2
ADAMTS4
TBL3
RPS2
RNF151
NOXO1
LETM1
ZNF224
PHF13
TTBK1
ZNF444
ZNF384
VCPIP1
C8orf44-SGK3
MYLK4
WRNIP1
CCDC146
SIRT2
NFKBIB
SLMAP
PEX26
ZC3H11A
ZBED6
UFSP2
C4orf47
ING3
RIC8B
EMILIN1
OST4
KHK
HTRA2
DQX1
POLR2E
GPX4
UBR2
LMNB2
FEM1A
BUB3
HMX2
CCDC150
NUDT13
ZNF350
ZNF514
ZNF2
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
CNOT1
PSMD11
CLP1
YPEL4
RAB1A
TMEM70
ELOC
DSTYK
ZNF554
SOX6
C11orf58
ZNF230
B3GALNT2
SEPTIN9
SERPINI1
PDCD10
STK17A
IPPK
TMEM101
PRCC
ZNF37A
TFPT
PRPF31
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
CTDP1
CCDC90B
JOSD2
ASPDH
RPS7
RPGRIP1L
FTO
NDUFB5
MRPL47
NMT1
DCAKD
GPKOW
CAPN15
VIPAS39
AHSA1
YPEL3
TBX6
ZNF862
PANK3
ARHGAP9
MARS1
FBXO48
APLF
CCDC174
INTS9
HMBOX1
WAPL
WDPCP
MDH1
SLC25A19
USP48
FAM185A
FBXW11
VARS2
GTF2H4
CDK5RAP2
RTN2
INTS1
RABAC1
MXI1
THYN1
ACAD8
EMP3
CCDC114
VPS50
HEPACAM2
PEX14
DFFA
TRAF7
RAB26
PTDSS2
ANO9
TTC1
ZW10
CLDN25
NFKBIL1
DDX39B
ATP6V1G2
RAB5C
SSR2
CNOT4
MED27
PRRG2
NOSIP
AKIRIN2
ZBTB7A
RANGAP1
SEC61A1
RPS6KB2
PTPRCAP
ZNF419
ZNF772
GPR15
CLDND1
SSR3
CWC22
ZGPAT
ARFRP1
VAPA
RAB13
RPS27
PIGU
ZNF547
TRAPPC2B
TMEM69
GPBP1L1
TMEM43
CHCHD4
SAMD1
C19orf67
MISP3
TIMM13
AURKAIP1
RPS20
SCAMP4
ADAT3
KMT2B
FHL3
UTP11
PGBD4
EMC7
FHIT
CHCHD3
ZNF226
IGSF8
PA2G4
SUFU
ACTR1A
ZNF484
ZNF25
ZNF32
DDX49
COPE
RPL18A
TMEM245
TOR1AIP2
TOR1AIP1
PCM1
TMEM160
RALGAPA2
GPAA1
EXOSC4
RBM6
MON1A
PSMD2
KAT7
BICD2
GABARAP
PHF23
DVL2
MRPL20
CCNL2
PHB2
CLDN6
TNFRSF12A
THOC6
HCFC1R1
LEMD2
METTL3
WBP2
PSMC4
SYPL1
ZNF527
NUP153
EIF1B
SLC50A1
DPM3
PSMD4
SPHK2
RPL18
FAM83E
ZNF354A
AHCTF1
USP35
KCTD21
VPS4B
PRR14
FBRS
MAX
PNPLA6
RAB30
SDCCAG8
CEP170
MBD1
CXXC1
PDE6D
COPS7B
SSBP1
ENOX2
CIAO3
BIRC5
SCAMP3
FAM189B
UBL7
PKLR
FDPS
NCDN
KIAA0319L
TMEM186
PMM2
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
UBE2Q1
CHRNB2
GID4
ATPAF2
UCHL5
RO60
PRR5L
COMMD9
TMEM143
SYNGR4
RPS3
MCRIP2
METTL26
WFIKKN1
EIF3C
EIF3CL
SNRPE
FAM193A
ZCCHC8
CORO1A
HIRIP3
GPR108
TRIP10
FBXL19
TXNDC9
EIF5B
PSMB4
SEC11C
CFAP410
CARS1
NOLC1
ZNF133
DDX47
USP31
S1PR4
NCLN
SCRT1
DGAT1
MUS81
CFL1
TOR2A
PIH1D1
ALDH16A1
SLC17A7
ZNF586
PTBP1
RAB29
CRK
ZNF764
SLC38A9
BOD1L1
GINS3
RPS13
WDR53
FBXO45
ZNF584
PSMD3
NKIRAS1
RPL15
DCAF1
ADSS2
CATSPERE
RPP40
GUSB
ZCCHC4
SNX1
CIAO2A
BET1
MAF1
CYC1
WDR97
L3MBTL2
NUF2
ZNF599
NEK8
RPL23A
TLCD1
RAB34
PROCA1
LTA4H
OPA1
LIN37
PROSER3
HSPB6
PSENEN
IGFLR1
RAD51AP2
RPS3A
ZNF227
RPL34
TLE3
SMN2
SMN1
ABCC5
LUC7L
FAM234A
CAPN10
EIF2S2
ZNF343
TERF2
RETSAT
ELMOD3
ZNF500
ZNF567
CDCA8
C1orf109
MGRN1
UBALD1
GEMIN6
WASHC3
ABRAXAS2
EEF1AKMT2
MITF
NCBP2AS2
NCBP2
NAT14
ZNF628
CAPG
SH2D6
WBP1
INO80B
DNM1L
XPOT
RPS26
STRN
TRABD
TMED9
B4GALT7
EXOC4
HSP90B1
TRMT1L
SWT1
ZNF451
TMEM199
SEBOX
POLDIP2
TPGS1
RAB7A
RAB3C
COG2
ZNF768
ZNF747
C1orf54
APH1A
FAM222A
ZNF776
SNAPIN
VMO1
PSMB6
GLTPD2
BRD3
TSACC
CCT3
ASXL1
ZNF805
AURKC
PPP6C
ZNF17
OAZ3
LRFN3
CLPP
ZNF277
DOCK4
DPP9
UBA1
HSPA13
SERP1
EIF2A
CSRNP2
TRUB1
RACGAP1
ZMAT5
UQCR10
FBXL18
CWC25
DCP1A
CAND1
KBTBD8
SHLD1
PPP1R13L
POLR1G
ZMYND15
MED11
CXCL16
SKIV2L
NELFE
C7orf25
BDP1
BLOC1S5
ZNF585A
GFM1
ZNF684
THAP1
RAB8B
THAP11
NUTF2
CENPT
PPP1R7
PASK
CCAR2
C8orf58
ZNF773
UBE2N
GPT2
IPO8
ZNF140
CHCHD6
EML6
RXFP4
KHDC4
KATNB1
POLRMT
FGF22
ZNF180
DPH2
B4GALT2
ATP6V0B
PES1
COPS7A
WASF1
CDC40
SF3B2
GAL3ST3
NARS1
QTRT2
CCDC191
BRIX1
RAD52
TMEM33
BABAM1
INTS4
MED23
PARK7
NOP53
ZNF436
CNOT6
DBP
CA11
ACLY
CDK8
MVB12A
ZNF134
GPR137
MORF4L1
HEXIM2
ZNF416
ZIK1
ELP6
NUP205
RNASEH2C
KAT5
CANT1
AP2B1
PEX12
MACC1
CCNL1
NME1
TMEM88
LSG1
NAA38
CYB5D1
UCK1
CMPK1
WIZ
SCYL3
SUPT4H1
UBA52
STMN3
RTEL1
POLR2J3
GSC2
GAPVD1
TOR1A
CLINT1
MRGBP
IFRD1
PUS3
DDX25
SKP2
LMBRD2
FAM228B
TP53I3
SF3B6
DARS2
CENPL
ITPR1
KCTD5
SUGP1
MAU2
PRKCSH
CCDC151
MYBL1
MRPS16
DNAJC9
ALKBH8
TM9SF4
AQR
SLC33A1
COPS8
MRPS25
CNPY2
DMAC1
OSBPL11
RGL2
PFDN6
WDR46
ILF3
SASS6
RRP36
MEA1
RPL37
CARD6
ZNF548
SF3A3
MTA2
TUT1
ZDHHC16
EXOSC1
MAP3K13
SH2D3C
CDK9
DEDD
TTLL11
RBL1
ZNF45
NDUFS7
EMSY
CAMLG
POMZP3
DYNC2LI1
TOMM22
C12orf43
TMEM222
EIF2D
FAM149B1
ECD
TPR
ODR4
PIP5KL1
DPM2
AKAP8
FIS1
CLDN15
USP15
PRDX2
TMEM94
RNASEH2A
SART1
CD2BP2
PCNA
TMEM230
MRPS15
VEZT
FGD6
RBL2
C8orf33
ALG10
BIVM-ERCC5
POGLUT2
BIVM
ZBTB45
SLC27A5
ESCO2
CCDC25
PNKP
AKT1S1
TBC1D17
ZSWIM9
LIG1
ZNF417
NUMA1
LRTOMT
CUEDC2
TOGARAM1
KLHL28
FAM180B
NDUFS3
KBTBD4
NDUFV1
FBXO9
CILK1
TRMT2A
RANBP1
GGPS1
ARID4B
ZNF460
SNIP1
DNALI1
MTR
SLC37A3
RAB19
PRR22
DUS3L
ZNF324B
HPS6
ARMH3
WDTC1
RPL29
MRPL54
APBA3
RAX2
DNAJC28
RWDD1
ZC3H10
RPL41
ESYT1
IPO7
GALM
THRA
CTNNBL1
TMEM214
THAP4
ATG4B
VRK1
ALG10B
UBE4A
SMIM30
WDR18
ZNF668
ZNF646
CDC34
ZNF317
DHX33
IPO13
ZSCAN32
ZNF174
TSNAX
R3HCC1L
ZNF26
FBXO38
ZNF721
PIGG
COA3
CNTD1
UBE2J2
SCNN1D
ZNF101
ATP13A1
C15orf40
JTB
DTX2
FAM53C
CDC25C
ZNF155
DNAJC11
EIF3D
TMEM109
PRPF19
UBE2V1
TIMM23
CCDC124
FCSK
TSN
PAOX
ECHS1
PGAM1
SLC25A44
RPS19
PSMA2
MAMSTR
ARHGEF1
CD79A
SMIM13
GSK3A
UBE2D1
LRPAP1
EDEM3
ZNF268
RPL12
LRSAM1
CLPTM1L
CCDC117
PURB
TMEM147
CCDC77
DHX30
SAP30
TXNL4B
DHX38
SERBP1
PHLPP1
FBF1
STXBP2
PCP2
XAB2
CEP350
ZNF211
CBR4
TMEM129
TACC3
SLBP
ZNF221
ZNF550
SEL1L
SETDB1
ERF
XRRA1
SPCS2
HBP1
MRPL19
ACP6
ZNF446
ZNF324
MAP1LC3B
FBXO31
PUM3
DNAJB6
AMT
NICN1
SHPK
CTNS
RPL22
RNF207
SESN1
PCBP2
CEP57L1
LRRC47
NDUFB10
RPL3L
ZNF286A
VPS45
C8orf76
NFATC3
FOXJ3
SDF4
B3GALT6
CDK19
AMD1
FAM166A
STPG3
PDF
NIP7
COG8
NELFB
DMAP1
ELOB
SLC25A10
MRPL12
SNAP47
JMJD4
PNISR
ZNF304
LAMTOR3
EIF3F
TCTEX1D4
BTBD19
N4BP2L2
DOHH
FZR1
TRUB2
COQ4
AP5S1
TP73
WRAP73
TMEM262
SUPT5H
RPS16