ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
SMARCA2
DPPA5
TRIP4
PCLAF
FBXW11
GDF11
REST
MED12
IL2RG
JPT1
TMPRSS11E
RIPK1
ARHGEF38
SPIC
ZNF483
RIF1
PIM2
ATF4
MIEF1
SOX6
MTF2
TNS3
ZYG11A
SEC22B
UGT1A6
UGT1A7
ID1
NRG1
ITGB3
SSU72
TERF1
SGK1
MYSM1
SLC35A5
ATG3
NCDN
KIAA0319L
FAM222B
BICD1
ZNF34
ZNF517
RPL8
CD99L2
PYGB
MUC4
APELA
CMIP
ZBTB8OS
RBBP4
TIAM2
OBI1
SLC37A4
NRROS
ZNF343
RNASET2
TBCD
FN3K
NDUFV1
TUBB4A
TARS1
MSTO1
ANKRD1
TMEM41B
SLC25A29
DUX4
PDSS2
MKRN1
NRBP2
RPS24
TNFSF8
UBAP2
SMC6
GEN1
LRRC10B
DDX43
ZFP3
MRS2
AIRE
CMTM4
EIF1B
CRYGB
MAGEA10-MAGEA5
MAGEA10
CELF4
KLF5
RMND5B
DENR
MRPL20
NBPF15
SPTLC2
MSL2
ATG9B
ABCB8
CFLAR
RPS28
NDUFA7
CD320
PRICKLE1
GLYATL1B
CCR8
FAM200B
PUF60
VANGL2
TRIM2
VENTX
UTF1
MLN
NLRP7
VSIG10
TCP1
MRPL18
PNLDC1
TACSTD2
ZBTB18
ATXN3
PARN
BFAR
SAMHD1
MFSD4B
ESR2
ZNF875
ZNF398
PRDM14
CLPB
FAM20A
PTAR1
SLC25A16
SHC1
FLAD1
CKS1B
CCDC130
OR6C3
ST3GAL6
SHCBP1L
DUSP12
NADK
PSMG3
CYP4A22
APOBEC3F
GSN
MROH7
ZSWIM3
ACOT8
CD9
ARRDC2
PROM1
PRODH
LOC102724788
CEBPZ
ZNF335
TULP2
NUCB1
ZNF552
GALNT8
NES
WDHD1
SOCS4
TENT5B
SPTY2D1
PLAAT4
RBM8A
ZCCHC4
FUBP1
DNAJB4
PMEPA1
TALDO1
ANAPC4
ABCC10
BLOC1S2
WDR74
STX5
SALL4
SEPHS2
DMXL1
AASS
NANOGNB
CLEC4C
NFKB2
TEKT3
ZDHHC9
ATAD3B
RPGRIP1
SYBU
MFHAS1
TPCN2
FANCA
CSAD
ZNF740
PALM2AKAP2
LRPAP1
KIFBP
CCN3
BTG2
DDX46
PCLO
UPP1
SMPD1
SOX5
SLC2A11
AKAP7
TRPV3
SLA2
PSORS1C2
CPA2
RPUSD3
GINS3
SRSF12
C10orf95
MFSD13A
DERA
C19orf25
SLC16A10
MTRNR2L1
GNAI2
GOLGA7B
SNAPC3
NBPF19
NBPF26
NBPF14
CREB3L1
SGPP2
TMPO
PTPRN
PRKAA1
NDUFAB1
TBL1XR1
GLDC
S100A2
OR6C70
PRPF39
KIF16B
MTHFD1L
FOXP1
PTBP2
SLC66A2
HSBP1L1
UTS2R
RPTOR
RNASE10
SLC25A12
ZNF696
KDR
ZNF565
TET3
PIGZ
UNC13B
ZNF649
FAN1
IRAK1BP1
TSACC
CCT3
ATMIN
MCHR1
RPL24
MYOF
CCDC200
NCBP2AS2
NCBP2
SLTM
STMN1
ZC3HAV1
OTX2
PPEF2
IGF2BP2
SNRPN
BRDT
MT1E
MOG
SMAD7
TDGF1
LRRC2
RMND1
ARMT1
BIN2
FLVCR2
ZNF318
FEZ2
DET1
NCOA7
CBX1
NBPF12
HNRNPL
PLEKHB2
PATE3
MBOAT2
HAUS5
GUCA1A
MPZ
SDHC
NCKAP1L
AGO1
SFRP2
IER5L
ZNF469
CCDC9
HOMEZ
PPP1R3E
PDCD7
WDR55
DND1
ITGB5
NVL
KDM2B
ABO
PRRC2B
MRGPRX3
PDCL
SLC23A2
NECTIN4
KLRB1
GTDC1
STAG2
DLX6
ID3
FGD4
TMEM70
LY96
FBXO40
LRRTM4
C7orf50
KLHL3
PGAM1
FUS
KRBA2
AGL
GARS1
SNX19
TTLL1
TMC5
ANGEL1
LRRC74A
NEPRO
SCGB1D1
FAM227A
CBY1
RASA1
NMUR1
REM1
DEFB124
APOBEC3G
MGLL
SSB
RAB15
FNTB
ZMAT3
REEP6
PCSK4
HNRNPA3
APOC1
SOX4
OAT
GCNT1
NPSR1
HSCB
CHEK2
TESK2
MMACHC
TMEM229B
MRPS25
DEFB108B
LARP1
GCNT2
SLC6A8
PNCK
DNTT
ARHGAP19
TRIM52
ETS1
GJA1
LARP1B
MPI
SNX16
DVL2
DLG4
ACADVL
SNX3
ZCCHC3
C20orf96
CATIP
FAM98A
RASSF8
GABRQ
IGFL4
PRORP
PPP2R3C
ABL2
CXADR
ZNF100
RUBCN
METTL2B
RTN4
ZNF695
BDH1
C9orf85
ABHD17B
LDB2
KCNF1
CTSC
KIF21A
ZP2
PLS3
RPGRIP1L
FTO
SGMS2
HSF2
KRT82
ZNF385B
P2RY12
TAF13
ZNF106
SNAP23
ANKDD1B
ENSA
MBNL2
ZFP64
KCTD7
SNX4
HOXD11
HOXD13
HOXD12
INTS9
HMBOX1
SLC35F6
BCL9L
MAPRE3
B4GALNT2
LIPK
CRACDL
FAM107A
CR1L
IQCF2
RASGRF2
CCL2
ARFGEF1
RBM22
SOAT1
PIAS4
NOTCH1
YIPF4
NLRC4
DPPA2
BARD1
VPS37C
ZNF729
FOXN3
CNR2
PAAF1
KHDC1L
LINGO1
ZNF75D
ETDC
PRDX4
GRAMD1C
SULT1B1
GRAP2
DEFB107B
DEFB107A
MORC1
OR8S1
IFRD1
SHISA5
S100A16
GJA10
GLIPR2
DDX23
RAB42
CCDC91
DNMBP
SYN3
SLAMF1
GP5
LDAH
SUCO
CCDC85A
FOXJ2
WDFY2
SOCS5
RIMKLB
ZNF562
PRAMEF33
PRAMEF10
SEC23B
OR6A2
SLC66A3
ZNF90
HILPDA
PHC1
AKIRIN2
C1R
HUS1
C2
BASP1
SIN3A
SCHIP1
PRDX3
LDLRAD1
PPP1R16B
DDX39A
PKN1
ELMO3
PTPN12
SPRY2
DYNLL2
HLA-F
EHD4
DISP3
DEFB132
ACYP2
PSME4
RTP3
PMS2
AIMP2
SLC3A2
CARS1
NCBP3
PI16
GIMAP5
PHETA2
NAGA
KLF7
SPATA13
SMAGP
HCAR3
HCAR2
OR5AR1
TUBB2A
FRAT2
CTNNA3
SOX2
TRIML2
F11R
SET
ZNF680
HYAL1
OR4X1
THOC2
SMIM31
ZNF566
ATP6V0A1
TRIM24
PNMA1
FCHO1
FGFR3
SLC35G4
P2RX4
TRIM56
ZMIZ2
MARCHF8
FLVCR1
SPATA45
TRAPPC8
MVB12A
BST2
CCDC57
PRPS1
PLTP
PNISR
HYOU1
VPS11
UGP2
HARBI1
ATG13
SLC35G5
DUSP29
AK4
MS4A12
DAGLB
GMCL2
CRLF2
OAZ3
AIP
TMEM134
DSP
ZNF260
TMEM202
TFAP2C
NTAQ1
ERVH48-1
PRKAG2
ARL4D
C5orf60
SEPTIN5
DOCK1
PDE4DIP
CATSPER3
ZNF665
TSPAN13
SYTL4
LEFTY2
MACROH2A1
ZMAT2
PCYOX1
REEP1
SARDH
PEX12
AP2B1
ZC3H12B
PSRC1
LIMS1
SSH1
ALDH1A2
ZNF43
MUC21
CRYZL2P-SEC16B
XBP1
CSPP1
BUB1
SNTG1
NUDT4B
NUDT4
ZNF460
CLDN4
METTL27
SLC7A7
MRPL52
CNGA1
NIPAL1
SH2D4B
CYP1A1
A2ML1
GNPTAB
ADCK1
IGFALS
FZD8
TREX1
ZNF532
ZIC4
ZIC1
AMBRA1
GOLGA6D
ASIP
ZNF534
TM9SF1
ZNF675
LOC100130520
CD300H
TSSK4
ORAI1
HS3ST2
FAM193B
SESTD1
MRPL22
GEMIN5
PUS1
OR8J3
BCOR
PINK1
CLDN9
CLDN6
STRA6
ADA2
ASH2L
ITPKB
ARHGAP28
RNF135
EVA1B
FASTKD1
SERF2
SIKE1
PPIG
ELL3
DCAF4L1
SLC30A9
CAPN3
COL26A1
TMEM247
CLPP
L1TD1
TTC13
ARV1
CREBZF
STMN2
CLEC4A
TOMM40
PIN4
CHD1L
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
SMYD3
ATG5
DTD1
OR8B3
POLD1
FMO5
SYT2
GPR85
MBD4
IFT122
IFITM1
IFITM2
RNF19B
CSF3
IFITM3
VAMP1
ESCO1
PTPN2
CYTH2
MDK
NUP205
NOXRED1
TXNDC15
PLLP
NNT
ALPL
GAST
LRFN5
RPS6KA2
LBP
CCM2
SULT4A1
LHFPL5
CLPS
RUNDC1
PTGES3L-AARSD1
PTGES3L
MAP3K19
RWDD2B
AARSD1
GGTLC3
TUBB
MDC1
USP32
KNG1
KRT8
URM1
LIN28A
CLEC9A
WDR25
WARS1
UAP1L1
SAPCD2
ELP6
NLRP12
ARID3B
OR2H2
MYO5C
RPS3
CDX2
UFD1
CDC45
VIT
ZNF37A
SLC17A5
USP1
CKAP5
METTL16
SHPK
CTNS
FAM174B
CRH
SRCAP
LOC730183
SALL3
SLFN12
PHKB
ITFG1
PRAMEF17
HLA-A
OR6J1
C5orf34
SUMO3
RAPH1
CCN6
SPIN1
FAM227B
OCM
EPB41L4B
SERPINB9
UBL3
IGSF23
ZNF600
CAAP1
PHB2
RPRD1A
SCUBE2
SRP14
VTA1
NMBR
STX18
CASP8
GAPDH
ARHGAP42
TAX1BP1
CCDC169-SOHLH2
CCDC169
RPP14
HTD2
HACD2
BCL2L1
FBXL19
EXT1
ZNF486
SUCLA2
RAB40AL
RPL11
ORC2
CADPS
GAD2
PARP1
FGF4
SLCO4C1
YWHAE
COL17A1
YAF2
SLC35G3
EIF4EBP2
FAM169A
FAF1
CENPS-CORT
CENPS
OR5M8
TULP4
ZSCAN2
VMO1
PSMB6
GLTPD2
TTC5
SOX21
FAM219A
DNAI1
ABCA13
SLC38A9
TBC1D22A
KCNQ5
GDF3
FERMT1
UGT1A4
UGT1A3
ZNF487
MRPS36
GTF2A1L
MORF4L2
PEA15
CENPA
PEX5
HLA-DQB1
GALNT3
NPAS1
TTC23L
RNF212B
TRAF3
CHRNA1
CHMP7
ZC3H11A
ZBED6
CGN
RANGAP1
ZC3H7B
MS4A1
DUSP6
LZTS1
UQCRHL
C10orf99
INKA2
SEC63
PPP1R8
DDX20
TSPAN16
ETV4
AARS2
HDAC9
CHI3L2
RMDN2
ZNF878
ZNF844
SPDYE5
POM121C
TCF7L1
CCAR2
C8orf58
RBPMS
IL1A
NFE2L3
SKA3
MRPL57
DLL3
TMEM239
BEND3
KNDC1
FEZF2
GALNT11
GML
SLC2A14
BOD1L1
FZD5
MX2
MTFR1
HOXB2
CSNK1D
NAV2
SRSF7
CERCAM
VN1R4
MSLN
LRRN3
IL34
EMSY
FOXO6
GGTLC2
HOXB1
INO80D
ZNF296
GEMIN7
PRTG
ZER1
TBC1D13
AP1S1
GIMAP7
RING1
NEB
CTHRC1
EIF4G3
PHTF2
ZNF341
TMEM160
PSME3IP1
EFNB2
RSPRY1
MPP2
SPATA6
MAML3
TLCD4
GEMIN6
EIF3C
SBNO1
SRRM4
IFNE
TMX2
MED19
ACADS
OR6S1
ATG7
ASNSD1
ASDURF
SCGB3A2
GABRB3
F7
SLC25A18
SPAG5
NDUFAF3
IMPDH2
DALRD3
CNOT11
TRIM44
COLEC11
HLA-DRB5
WDR11
DHRS3
TTC9C
HNRNPUL2
TMC7
RBBP9
PRKAR1A
SMARCB1
PRR13
LGALS4
GADD45G
GPRC5B
GNA12
BRWD3
LPCAT4
WDR33
TRIM5
TRIM22
ZNF432
SDCBP
CD101
NAA50
ATP6V1A
KANSL1L
OR1E3
DES
MTRNR2L2
MSH3
DHFR
CEP41
INSM1
PLPP3
MESP2
GAS6
CPT2
FGD3
SLC20A2
SH3PXD2B
ARL8B
SMCO1
TMEM132B
OR5K3
SRCIN1
LYPD6B
TBC1D14
NAA30
F11
MRFAP1L1
BLOC1S4
SPATA2
RNF225