ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
THOC3
DUX4
MANBAL
MAMDC2
NAV2
FAM227A
CBY1
NOTCH1
LFNG
SINHCAF
PYCR2
RPGRIP1
HMGB1
KRT31
PLPP2
MED25
FUZ
NDST1
KDM2A
FRG2C
TJAP1
NDUFB5
MRPL47
TGIF1
MTF2
PHYHD1
DNM1L
PTMA
NEUROD1
LOC102724770
DGCR6
CCL24
ZSCAN2
NEK6
MYEOV
TMEM88B
ANKRD65
SNX16
SMCO1
DPP3
ARIH1
ERG
CLCF1
PLSCR2
SCGB1A1
KMT2B
FGF19
ESRP1
WDFY2
FRG2
ARID2
KRT1
FHL2
ITGB4
WDR74
STX5
CHST6
MTDH
MCCC1
ISL2
TINAGL1
PHF5A
ACO2
LYPD1
SPINT1
MUC1
TIAF1
MYL12A
LIMK2
PPP1R13B
FBXL19
VWCE
CPSF4L
DUSP1
EPHX1
CNP
SMIM3
TRIM48
DISP3
ARSG
SLC16A6
MEIS3
TMEM205
CCDC159
RAB3D
RDX
SIX2
JUP
ADAM28
F11R
CHD6
KLF7
OLFML3
PHAX
ALDH7A1
DDX17
ZNF775
ZNF503
CAPNS2
IQCH
AAGAB
SH3GL3
RFLNA
TCF12
CCT2
KIF6
GALNT10
GLI2
CEP41
ERGIC2
FMN1
CNTN1
SRI
ONECUT3
CPT1A
PCYOX1
TIA1
KCNN2
CYTH2
VASH2
MUS81
CFL1
POLR3E
HIPK1
ETV1
OTUB2
LEMD2
PEDS1-UBE2V1
PEDS1
HNRNPDL
ENOPH1
N4BP1
DST
CAPRIN1
SOX5
EP300
NUP160
NDUFS5
SLC16A13
SLC16A11
ESRRA
CATSPERZ
CCDC200
ASB2
ERCC1
OAZ2
PTHLH
PLEKHA3
FKBP7
LRRC25
CUEDC1
CPNE2
UNK
H3-3B
HOMER2
IFRD1
YWHAZ
MS4A2
SHF
MAP3K2
KLK6
GRK6
SPHK1
PSG1
PELATON
PMEPA1
CCDC57
SOX6
COL23A1
C11orf58
HNRNPC
KIF26B
ZFC3H1
THAP2
POLB
CYP1A1
ZNF268
COL17A1
UGT1A6
ZSCAN9
SLC25A25
ZFAND3
TTF2
TMTC4
STEAP3
ZNF428
SRRM5
LTBP2
COL21A1
PER2
WEE1
ZDHHC3
EXOSC7
NAP1L4
CDH13
RHOBTB2
AHNAK2
TLK2
SLC33A1
PIMREG
AIPL1
TIAL1
SLC26A9
H2BC4
H2AC6
TMEM41B
SUFU
ACTR1A
EFHC1
CDCP2
ITGB1
ZNF506
S100A6
SUN1
ST8SIA1
ABCC10
LPIN1
PADI2
SYNCRIP
VAMP8
ITGA6
VAMP5
BCAS2
COL4A2-AS2
EFNA1
SLC50A1
SIPA1L2
STN1
RSF1
AAMDC
CDC42EP3
TNRC18
LOC100129484
SLC34A1
PFN3
SLC25A36
PPP1R10
MRPS18B
ATAT1
ETNK1
DMRTA2
HID1
TRPM1
NPIPB12
TJP2
GPR39
EXOSC2
C1orf116
PDIA4
RBM39
PDP1
ABCC1
SRSF7
ETV5
MUC3A
FXR1
TENT5C
PNMA8A
NPIPB5
ZNF195
EXOC5
AP5M1
PRR14
FBRS
ETFRF1
CFAP94
ASMTL
SHISA7
TSPAN14
C6orf132
UBTD2
BMF
ARHGAP5
EPB41L4B
NASP
SLC2A4
HES1
ACOT1
TTC13
ARV1
MEF2C
DNAJC21
BRIX1
KNTC1
TNFRSF21
NPIPA3
NPIPA2
ZNF608
ONECUT2
PIN4
SLC7A5
NTF3
ZDHHC5
PLA2G4B
JMJD7-PLA2G4B
JMJD7
LAMC1
FBXO32
FGF1
IVNS1ABP
SOX2
OPN5
PPP1R37
MICALL1
EIF4A2
RNF31
PSME2
EMC9
PSME1
ADRM1
OR7C1
OR7A5
OR7A10
MAFK
MAST1
RTBDN
EIF1AX
ATP6V0D2
ACP6
LBH
TMCC1
PRORP
PPP2R3C
MNT
CNIH4
CLDND1
CSRNP2
GSTA3
KIAA0040
PRDM2
TRIB1
NPIPB8
TMEM200C
DHRS3
RALGDS
C15orf40
AKNA
RBFOX2
CTSV
ZNF627
LOC100509620
DOCK5
MYL12B
HMGN1
ZNF37A
NTN5
PGBD2
CAST
MXD1
WDR36
UBR2
CHD1L
LYRM1
DCUN1D3
CTDSP2
TBC1D31
PRKAB2
STK24
FOXO6
LNX1
RBBP6
G3BP2
CSTB
RRP1
ID3
MAST4
ABCC2
ACSL6
GDF5
CEP250
SDC1
CASQ2
SLCO5A1
CLDN4
ERV3-1-ZNF117
ERV3-1
LMNA
RASAL2
MARCKS
S100A16
S100A14
RAPGEFL1
EAPP
HSPH1
RRBP1
FAM83G
PLA2G6
CSDE1
RIPOR1
ZBTB6
RC3H2
KLHL2
SRSF6
PBX2
GPSM3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCT7
ZNF436
FZR1
H3C15
H3C14
PDE4DIP
H4C14
GREB1
ZBTB37
ZMYM1
DOHH
IRAG2
NRCAM
DHX32
TES
ADAR
MBNL1
TAX1BP3
EMC6
SLC41A3
FAM83B
GSN
CEP63
ANAPC13
C2CD5
CTSB
ETFBKMT
NEBL
PTX3
MKNK1
MOB3C
PDE4D
TOP1
VDAC2
DGLUCY
PIGX
CEP19
RABEP2
CD19
CDKAL1
SRBD1
C16orf74
C1QTNF7
SPAG4
ATAD3A
GPR158
HLTF
MCM7
AP4M1
LSG1
ARNTL2
GCHFR
C15orf62
PLEKHG1
ANKRD40
GADD45A
NWD1
KRT6A
CD55
SMAD3
RAPGEF5
WDR33
ZSWIM4
POU2F1
NCOA4
HNRNPU
MT1F
MT1B
LCA5
SNAPC3
MSANTD4
CCDC88A
PHACTR2
MFGE8
TMEM107
MAP3K9
EXD1
CHP1
TEX9
RFX7
TMUB2
ENKUR
HEXIM2
CHD9
MTRNR2L2
MSH3
DHFR
KDM3A
PIF1
TLX3
ANKRD33B
RIOX1
SLC25A27
CYP39A1
GGPS1
ARID4B
S100A5
S100A4
S100A3
PSME3IP1
RSPRY1
GNA13
ANO1
MTA3
NFATC3
KCNG3
TSPAN13
PTPN12
GSG1
DDX5
CEP95
ALPK2
POLG2
OGA
SPATA12
CX3CL1
VARS2
GTF2H4
LDHD
PAQR8
SPRY4
STRA6
SLC2A8
ZNF763
RASGRF1
H4-16
H2AJ
KCNK15
NR1D1
GET3
SEPTIN9
BAHCC1
FLYWCH1
ADGRG7
NPIPB3
DDR1
NOTCH2
ZMAT2
SMCP
KLHL38
HARS2
HARS1
THAP10
LRRC49
MEX3D
CHD8
CREM
DCBLD2
RTN4
PWWP2A
ARF4
PSMB7
MYOF
KMT5B
DCLRE1B
AP4B1
NPIPB13
MIDEAS
NFE2L2
ZNF669
YLPM1
PHRF1
EXPH5
PTPRH
KMT5A
SPAAR
HRCT1
VPS50
HEPACAM2
TRAPPC6B
PNN
CD248
TP63
CYP2S1
AMN1
BORCS6
DENND4A
HAO2
EEF1AKNMT
NIBAN2
RNF13
BRMS1L
SLC25A21
TNS4
CDKN1A
CORO2B
ARID5A
ANKRD12
DTD2
CDCA4
FAM193B
GAL3ST4
STAG3
GPC2
CCND1
CA5B
HOPX
LOC100505841
MAGOHB
RNF103-CHMP3
RMND5A
TNFAIP8
SLCO1A2
BCL2L11
SF3B5
FAM107B
KLRF2
CLEC2B
PYGB
WSB2
WDR54
C2orf81
ENTPD6
M6PR
KLRG1
ARPP19
ZFHX3
NDUFS2
ADAMTS4
CEL
PARP2
CCNB1IP1
CTXN3
CEP20
LARS1
PLCXD2
SMARCA2
REST
CDX2
TMPRSS11E
NES
NR5A2
DPPA5
TERF1
SMAD7
SACS
PLAGL1
ARHGEF38
CADPS
PIPOX
OTX2
SOX21
ZNF483
METTL11B
ANKRD1
DNMBP
LRRC10B
MUC4
GAST
MTRNR2L8
CACHD1
DUSP6
AGO1
ZBTB8OS
RBBP4
NRG1
ATP1A4
APOBEC3F
SPRED2
NTRK2
TCF7L1
RMND5B
URM1
RIPK1
PIM2
GOLGA6D
CD99L2
FLVCR1
BDH1
SFRP2
LRRN1
MTRNR2L1
VENTX
UTF1
BCOR
TENT5B
LRRN3
HDAC9
FAM222B
TARS1
SOCS3
SERINC5
GIMAP5
SHCBP1L
SPATA45
PPBP
PF4
SGK1
GDF11
PHC1
CD82
SSB
MFSD4B
ITGB8
SNRPN
ID1
PRICKLE1
CLDN9
OBI1
KIF21A
MTHFD1L
CLDN6
TDGF1
ZSWIM3
ACOT8
SAMHD1
RPH3A
SRRM4
BTG2
LMCD1
MOBP
SHC1
FAM174B
RNASE6
C9orf85
FLAD1
CKS1B
LRRC2
OR5AR1
EDDM3B
POU5F1
GAD2
SLTM
FBXW11
ABHD17B
DMXL1
TALDO1
ETS1
DNMT3B
TNNI3K
SHISA5
NANOG
TREX1
SMPD1
KLHL7
RNASET2
SCGB3A2
GLYATL1B
MED12
IL2RG
ABHD11
HESX1
HOXB1
KDR
LZTS1
RASGRF2
CBFA2T2
HSCB
CHEK2
ZNF398
TRIM2
MRPL20
NADK
CELF3
PPP1R16A
ENSA
NFE2L3
FGD3
FGD4
GBX2
GLRA1
RIIAD1
DDX43
FOXH1
KIF5C
BCL2L1
VCAN
FGFR2
WFDC8
PSMD9
HPD
ITPRID1
ZNF343
RCN1
TRAPPC8
ETV4
GOLGA6B
GAS1
NAA50
ATP6V1A
LDB2
NCDN
KIAA0319L
SALL4
ART1
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
GNAI1
PPP1R16B
RPS24
BUB1
GNAI2
CER1
CELF4
IER5L
STON1-GTF2A1L
LHPP
GSX2
TEKT3
TMEM70
DAGLB
USP44
GADD45G
ZNF18
SCN5A
ICMT
HES3
ATP8A2
MYSM1
TRIM24
FIGNL2
CSAD
FAM120B
GPRC5B
CDC14B
FZD8
LY96
ZNF740
SYBU
LIN28B
FBP1
PRKG1
FOXP4
FGF2
C1orf127
GOLGA6C
MFHAS1
PARP1
PALM2AKAP2
PTBP2
LIMCH1
DDX46
ZCCHC3
C20orf96
ATF4
MKRN1
SNURF
GCNT2
TESK2
IL34
TMEM63A
SLA2
RIF1
PSMG3
PUF60
ZBTB40
FRAT2
FOXP1
APBA2
LINGO1
LEFTY1
KIFBP
RNF220
TRIP4
PCLAF
MRS2
SGMS2
PHLPP2
FOXA2
NFE2L1
DLL1
SAMD5
FBXO40
MMACHC
SGPP2
PRDM14
MIEF1
WDR55
DND1
ECE1
HOXD11
MACROH2A1
CRH
MDN1
ZEB2
SLC35A5
DHDDS
ATG3
SALL3
RASA1
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
CREB5
LRRTM3
SLC2A14
ZNF532
SPIC
ITGB3
SORBS2
P2RY12
PRSS48
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
ITPRIP
CDH18
GJA1
MBNL2
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
RFX4
LARP1B
MAD2L2
EOMES
SCAF4
TMC5
MID1
DNTT
ALDH1A2
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
DRAXIN
PRR15
GABRB3
UNC13B
FOXB1
VOPP1
ST18
POSTN
CRYAA2
CRYAA
BEND3
PDCL
MORF4L2
TUBB
MDC1
DPH6
DUSP29
WBP1L
SOX14
OR5K3
SASH1
ECT2
CHFR
CPA2
COMMD7
PCBP1
TGIF2-RAB5IF
TGIF2
EBF2
SH3GL1
CHAF1A
AASS
SH3BP4
BFSP1
FAM200B
ANAPC4
LIN28A
CTNNA1
MLEC
LRRTM2
KIAA0895
FAM180A
UQCRHL
SULT6B1
NRROS
TPH2
MTM1
ASXL3
CDYL
KNDC1
C1orf100
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
LRRTM4
SEMA6D
CA6
SEPTIN5
SIN3A
PSORS1C2
FEZF2
L1TD1
TCF7L2