ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10035162 | KYSE-140
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◣ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

ITGB8
KLHL6
ECT2
SMCO1
STK31
LYPD5
MCCC1
CTNNA1
LRRTM2
SOX21
COL4A2-AS2
TMTC4
KRT31
SOWAHA
SHROOM1
MTF2
SPATA16
ANKRD35
NRCAM
MELTF
ZNF80
COL17A1
CPT1A
LTBP2
PPT1
LSM5
AVL9
NDUFB5
MRPL47
SUN1
HOXA9
HOXA10
HOXA7
EAPP
MSMP
LRRC72
ETV1
SMCO2
PRR15
NT5C3A
NAV2
GRK6
LMO3
HDAC9
TNFAIP2
FARP1
SLC10A1
NEBL
SH3BP4
PACSIN2
OR13C5
OR13C2
CYP2S1
NTN5
YEATS2
TPCN2
TTC39C
RNF183
FCHO1
KLHL24
LMCD1
ANKUB1
THOC3
CYTH2
PYCR2
RPGRIP1
GOT1L1
NAALADL2
IFRD1
HMGB1
KIF6
PTPN3
CCR4
CHSY1
TNXB
C4B_2
C4B
CDKAL1
LYPLAL1
SSR3
COL4A2
COL4A1
OR7C1
OR7A5
OR7A10
FEZF2
SSUH2
PROSER2
CCDC83
PER2
ACAD9
ALPK2
CDC42EP3
RAB23
CTSV
SEMA4D
LIMK2
FGD3
MED25
FUZ
ZNF436
CYP21A2
CCL26
RAI14
ETV6
SMCP
INHBA
XXYLT1
MANSC1
BORCS5
SERPINA1
ARHGEF7
KRTAP3-2
KRTAP3-1
SDK1
CNP
RNF31
PSME2
EMC9
PSME1
RXFP1
NPIPA8
NPIPA7
RASAL2
OLFML1
HES1
TJAP1
ODC1
ABLIM1
PADI2
C1GALT1
LTF
LNX1
MANBAL
GALNT10
PUS7L
IRAK4
NTF3
VWCE
SEMA3D
SUV39H2
CYB5A
MAD1L1
ZNF609
CELF3
RIIAD1
DGLUCY
FAM3C
MFGE8
PDPN
HGS
ARL16
MUC13
ZNF428
SRRM5
UGT3A2
PXMP4
LFNG
PTPRB
FAM120B
CBX1
FAM220A
DYRK1B
FBL
CNTN1
RAPGEF5
HAUS6
ST6GALNAC2
SIPA1L2
MAP1B
PPP2R3A
ENKUR
ARID2
IFT80
SMC4
TAF1L
TNRC18
LOC100129484
SLC33A1
FAM89A
TRIM2
UACA
PSG1
CLDN10
PRPF4
CDC26
SYNGR2
UFD1
CDC45
ANKRD13D
OPN5
CLEC4F
INSR
HSBP1
ZNF57
CYB5R2
MATR3
POLR2M
PHF5A
ACO2
MAST4
PDIA4
TMCC1
APC2
RPS15
CSAD
ZNF740
NINJ2
PLEKHG1
KMT2B
FXYD3
PHYHD1
MMP20
SLC2A8
NRIP2
KRT86
GUCA1C
MOBP
TBC1D23
PRXL2A
SLC20A2
SLC25A27
CYP39A1
MUC1
PALM2AKAP2
STMN1
FXR1
ZNF608
MARCKS
NADSYN1
DHCR7
FAM126A
POMT2
GSTZ1
MNAT1
NUAK2
CORO1C
ARHGEF5
CLRN1
ZNF148
GPRC5A
FGF12
MMP10
FKBP9
ALG8
TOMM40
ACAP2
GCNT2
SLC9A1
PKP2
ZFR
CLIP1
PTMA
TAGLN2
SPRY4
PCID2
CUL4A
ETV4
IL7R
KRT13
RNF113A
NDUFA1
LGSN
KCTD4
FBXO27
RFC4
LYRM1
DCUN1D3
LPIN1
ECH1
MTHFD1L
ZSCAN2
ZDHHC3
EXOSC7
MEOX1
OGA
MYEOV
NME4
DECR2
C3orf20
SAXO1
TBC1D2
RRAGA
USP35
KCTD21
F11R
AHNAK2
LECT2
POLDIP3
SVIL
TMEM139
CASP2
TAB2
ABCC1
TEAD4
CHST6
KIF13A
RABGAP1L
PALMD
CLDND1
SLC25A11
RNF167
PFN1
GP1BA
DDX17
FLYWCH1
TIGD6
HMGXB3
PSMD5
FBXL19
ARHGEF35
C2orf88
CPSF4L
PIF1
INPP5D
SENP7
RNF152
LIFR
TIAF1
RETNLB
NPIPA3
NPIPA2
WDR36
OGFOD1
NUDT21
CAPNS2
DST
NKD2
ETFRF1
CFAP94
HES7
C1QTNF7
KBTBD6
TCP11L2
CD163
FAM227A
CBY1
PTBP2
RCOR1
NOBOX
NOS3
AGR2
JUP
MIDN
ATP5F1D
MAP3K5
AGPAT3
DACT2
ARHGAP8
MTURN
BTG1
DAGLB
PLEKHA1
DYRK4
TBC1D17
AKT1S1
PNKP
PRR16
CYTH1
UPK3B
CHST12
LAMP1
GPBP1
FNIP2
MAP11
SLC35D2
LAMTOR4
CCDC57
TMEM63C
PRDM14
SYT2
MAP3K7
ABCC10
CDR2L
KIAA0930
MRPL36
NDUFS6
LGALS9C
NR1I3
EXOC6
KBTBD2
SORT1
SOCS3
CALR3
C19orf44
PAM
TMEM138
CYB561A3
RNF168
CLDN4
SYNE2
MORF4L1
ETHE1
RFLNA
SCD5
PRORP
PPP2R3C
PLA2G4B
JMJD7-PLA2G4B
JMJD7
ACP7
PHACTR2
NIBAN2
DOCK9
PSPH
CCT6A
HERC5
WASF1
CDC40
PLS1
ZNF775
CD2BP2
NRARP
GAST
NPIPA1
SYNCRIP
TMCC2
KCNJ15
CRYBB1
PTCD2
MRPS27
LVRN
WARS2
KIAA0040
CTSH
TCTN2
CUEDC1
SNRPE
FAM133B
PPP1R3G
TAF12
CHI3L2
TUBA1C
CLUAP1
C16orf90
CDH13
HNRNPA0
CA6
TRIB2
FLG
DLX5
GLI3
OTULIN
PER1
VAMP2
DMRT3
GNL2
ESRP1
PHF24
IQCH
AAGAB
PIK3R3
KRT6A
TMUB2
FAM102A
E2F1
TENM3
CCDC171
HERPUD2
C22orf15
NAAA
ZNF70
VPREB3
PLPP2
STK24
SDCBP2
OAZ2
HAO2
IKZF3
CYP1A1
PLD1
STEAP1B
HSPB3
DDR1
ZNF503
ARHGAP5
WDR74
STX5
NEK6
H2AZ2
UNC13B
PSME3IP1
RSPRY1
PPARG
NOX4
GPNMB
METTL7A
CCL24
YWHAG
WDR54
C2orf81
SIX2
PGRMC2
RPA3
ANKRD1
GET3
DUSP1
SMARCC1
TLN2
ID1
C7orf57
FGF19
MME
OR10S1
ITPRIP
SINHCAF
MEF2C
NOD1
SETX
ISLR2
HEBP2
TTC39B
BPHL
TUBB
MDC1
RIMKLB
PRKACB
DLGAP1
GAL3ST4
STAG3
GPC2
PPME1
C2CD3
WDFY2
COLCA2
NOTCH1
SMAD3
MTUS1
NKIRAS1
NR1D2
GTF3C3
C2orf66
ANAPC4
KRTAP19-3
KRTAP19-2
KRTAP19-1
ARHGDIB
TRPM7
MEIS3
CHMP5
BAG1
SHISA7
SOX2
FMNL3
NDE1
MARF1
ZBTB20
NWD1
VGF
MT1F
MT1B
SNAPC3
PNMA8A
PCOLCE
MOSPD3
RPL15
PLA1A
PLSCR2
DIABLO
NDUFS8
GSN
CSTA
FOSL2
TSPAN13
CEP20
ADAP1
TRMT2A
RANBP1
DKK3
PLEKHG3
SPX
PLD6
MSRA
ONECUT2
FBXO48
APLF
HPS3
XRRA1
SPCS2
RIPK1
ABO
KRT8
LIMS1
PLA2G6
BAZ2A
ATP5F1B
GJC1
GOLIM4
POLB
SHC3
KCNMB2
FOXJ3
ARNTL
GCHFR
C15orf62
TWF1
HSD3B1
TGFBR2
C10orf67
PPP1R42
ASCL3
GSAP
GMCL2
UNK
H3-3B
SLC16A13
SLC16A11
TLX3
METRN
ANTKMT
FBXL16
DTD2
KCNK10
AK4
CALHM4
PRKCI
DLG1
RAB40B
DCSTAMP
FAM91A1
RFWD3
FFAR3
GPR42
KDM2A
KNTC1
FREM2
NDST1
HIP1
CTNNAL1
SAXO2
EFL1
PBX2
GPSM3
LGALS8
CYP2B6
MTMR1
PTPRS
RINT1
SLC25A25
RNF13
ARHGAP10
BTBD10
CEP63
ANAPC13
FZR1
PARP16
SLC25A36
CRISPLD1
SPAST
GLRX3
FAM241B
IGFL3
CAST
UPF1
PNKD
CSTB
RRP1
CHD1L
DIMT1
IPO11
NOL3
KIAA0895L
EXOC3L1
E2F4
EXOSC2
PHKB
ITFG1
LY6G6F-LY6G6D
LY6G6F
PRKAB2
LRRFIP2
SLCO1B3
ABHD16A
BTF3
HACD3
ZFHX3
SPHK1
LOC100505841
AMER3
ZBTB40
UBR2
EGFR
COPS7A
RADIL
KRT23
VIT
OR2H2
ERG
ABL2
HSPH1
FRAT1
SLC14A2
NFKBIA
ZMYM1
HHAT
PLAGL1
ZNF304
NUAK1
CNKSR3
ZSWIM4
CYB561D1
DDX59
ATXN7L2
CRIP2
CCDC14
NPIPB5
KCNJ16
LRCH1
TJP2
METTL11B
CCDC80
GREB1
ICE1
CADPS
PRDM2
C1QL3
WEE1
COL21A1
UMAD1
EFCAB12
MYMK
KLF5
NUP160
TGFBI
VOPP1
SPPL2B
LSM7
ROCK2
IL34
ACVR1
TMEM205
CCDC159
RAB3D
ETF1
NOL6
EXOC2
FZD1
TMEM128
LAMTOR1
ANAPC15
SMIM11B
SMIM11A
S1PR3
GSTO1
C9orf47
ATG4C
ZFP92
HBP1
RIOX1
COTL1
CBLC
EDN1
APELA
SMAD5
NEURL1
UPF2
CXCL13
LRIG1
PPP1R13B
HEXIM2
PAAF1
PTP4A1
ZNF77
GOLGB1
E4F1
FAM155A
C7
MPP3
SOSTDC1
CD300LG
DNASE1L2
GIMAP5
COQ8A
GADD45G
STK32C
LRRC27
GDF5
CEP250
AHSP
TNRC6B
YDJC
CCDC116
TMEM255A
FOXN2
IFIT1
GADD45A
CLIP4
KLHL13
PTER
ABHD11
VIM
BAHCC1
KLHDC8A
FAIM2
TMEM221
RBFOX2
VPS37B
FRY
ITGB4
RAB4B
MIA
NEMF
MCM7
AP4M1
NME7
BLZF1
ADH7
KRTAP5-11
SLC39A5
RNF41
NABP2
KRTAP5-10
CAV1
IL1F10
NPIPB12
SEL1L3
IL36RN
TSSK1B
MTHFD1
CAVIN1
NME1
CCDC130
DHX8
RHOBTB2
CATSPER3
GBP6
SLC22A16
SREK1IP1
CWC27
FBXO17
SLC34A1
PFN3
C12orf43
GPR33
DNM1L
IL22RA1
CDC5L
GUK1
SRP68
ITGB1
MAP3K9
GRAMD1C
COX8C
SMUG1
PAQR8
LRRIQ4
LRRC34
NPIPB8
NACA2
ANAPC10
ABCE1
ZNF770
NSUN3
DHFR2
PIPOX
TES
CSRNP2
ITPK1
AKAP9
RNF20
TBX4
VARS2
GTF2H4
ATAD3A
CEP120
ZWINT
RFC5
MEGF8
DCUN1D1
STARD7
GRK5
ARHGEF19
DNAH5
CNOT11
RAB30
PAN2
IL23A
TNFAIP8
KIF23
CERS3
RARB
ESRRA
CATSPERZ
SH3PXD2A
SEL1L
MYLK
CHMP4B
NASP
TEX101
MCM10
NAP1L4
GSTM5
HLA-E
AHR
MIS18BP1
SERPINB13
ANGPT1
EXOC5
AP5M1
MAP3K20
ITGBL1
PIK3R4
EIF3B
LCA5
ERV3-1-ZNF117
ERV3-1
PACRGL
SLC45A4
KRT19
KRT15
SLC25A47
ARID5B
TMEM200B
TEN1
ACOX1
NPIPA5
LMNA
EFNB2
CDK12
MED1
PPFIBP2
OR1K1
NPM3
FGF8
DENND1B
CCDC184
TCF25
BTC
SYBU
EMSY
BZW2
YLPM1
ANKMY2
PIGX
CEP19
KDM4A
DHRS7
GET4
LRRC25
IKBKB
DDX3X
CFAP20
ARSG
SLC16A6
TRPV4
FOXK1
CSK
PRTFDC1
RSF1
AAMDC
DNAH2
KIRREL3
NT5E
CMYA5
BRD4
PSMC3IP
UBA3
ARL6IP5
DUSP6
RPL27
IFI35
SFPQ
CCDC38
AMDHD1
SFXN1
H2BC8
H2AC8
H3C6
KIF2C
MED9
EMP2
VWA5B2
AKNA
NPFFR1
TMEM37
FZD2
HEXB
EXOSC5
BCKDHA
DOCK5
TTC6
FOXA1
GBP5
TRIM77
ISL2
DNAJB1
TECR
SLAIN1
C12orf73
TDG
GDPD5
ELL
MRPL21
IGHMBP2
GNA12
HNRNPDL
ENOPH1
FAM222B
ZNF335
ELAPOR1