ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SRP68
ANKRD35
LFNG
KRT31
LGALS8
ARID2
GABPB2
CELF3
RIIAD1
PLPP2
NTN5
CCPG1
C15orf65
PTMA
NAV2
TES
RORC
C2CD4D
PIPOX
NOTCH1
PYM1
DGKA
ZMAT4
GALNT10
CEP20
RPGRIP1
ITGB8
ANKRD33B
SMCO1
LRP12
SEMA4D
FAM227A
CBY1
MTF2
WFDC8
GGH
ZNF335
NTF3
CTNNA1
LRRTM2
ADAM28
ARPIN-AP3S2
ARPIN
CUEDC1
NKD2
GRK6
PXYLP1
PDE4DIP
CLUAP1
C16orf90
BTBD11
CDX2
TSKU
SH3BP4
HDAC4
CDH18
VWCE
IL21
NFIB
RNASET2
UGT1A6
KIAA0040
TTC39C
MATR3
CADPS
ANKRD6
TMCC1
TMPRSS15
GCNT1
HGS
ARL16
ERVH48-1
ECT2
SNAPC3
ZSCAN2
PRR15
PER2
SOX21
IFRD1
GPR171
VWA2
TARS3
DSP
ZBTB45
TRIM28
MRPL36
NDUFS6
PDIA6
DCSTAMP
LSM5
AVL9
LOXL3
DOK1
FMN1
ID2
PLEKHG1
SDK1
SYBU
PLCH1
NDUFB5
MRPL47
SERINC5
TASP1
LINGO1
LMCD1
CPLX2
NMNAT2
ZNF775
POLR1F
LPP
CDK5R1
ERG
MED25
FUZ
ZNF750
HMGB1
DAAM2
MUC1
CCT2
HES1
MYO5C
ODF4
HMGN1
USP3
GSN
CLDN14
EPHX1
SDC1
TBX4
YEATS2
ESRRA
CATSPERZ
MYEOV
EPHB3
CCL24
SINHCAF
KIAA2012
EPHX3
UAP1L1
SAPCD2
RNF217
LRP11
CHSY1
PPP6R3
IL17RD
KLHDC8A
KCNN2
SIPA1L2
EPYC
NPIPA8
NPIPA7
STK31
LRIG1
HES5
PANK4
CBFA2T2
SRGAP1
GSTP1
KDM2A
VASH2
APP
SEPTIN9
C1QTNF7
TFEB
PGC
LTK
CCL26
TNS3
ALDH1A1
SIX2
ESYT3
NOTCH2NLC
NOTCH2
ETV3
MARCKS
MAPRE3
SLC20A2
SLCO5A1
IQCH
AAGAB
GEMIN4
SLC12A7
BCL9
SH3GL3
CRYGD
CRYGC
SNX27
KMT2B
CEMIP
ZDHHC3
EXOSC7
BMPR2
ATP8B1
AUH
TMEM41B
DPYSL3
TTPA
TLR4
CLEC4F
ERMN
SACS
FGFR2
UPF1
THOC3
CYP1A1
H3C15
H3C14
H4C14
H4C15
LTBP1
TGIF1
RAB23
HDAC9
PCYOX1
WDR33
TIA1
RYK
NEBL
KLF7
VIT
HRH3
KRT8
TM4SF1
TMPRSS7
ITGB3
SYNCRIP
CLDN11
LOC100506422
ADI1
YWHAQ
PTGR1
FBXL19
AKIRIN2
MUS81
CFL1
SLC26A9
RBM48
PEX1
ADCY10
POU3F2
LYPLAL1
CCDC38
AMDHD1
TJP2
HSF2
DNAJB1
TECR
CTSK
ATP8A2
TNFRSF11B
COLEC10
CCDC57
SPRY4
POLB
QKI
SYNE2
LY6G6F-LY6G6D
LY6G6F
MPIG6B
LY6G6C
SEM1
LY6G6D
ETV1
KIF21B
WDR3
GDAP2
CYP24A1
DUSP1
HAUS5
TRMT12
TGFBI
BCL2L1
DHX8
SLC25A12
ARIH1
STAU2
MACROH2A1
SOX2
PTP4A3
CEP85L
SLC25A36
ST7
SLC9C1
CYTH2
ADGRD1
MSANTD4
FGD6
VEZT
HAO2
CHN2
CPVL
ZKSCAN1
USP54
MYOZ1
ERCC4
SGPP2
ZSCAN10
METTL11B
DDX17
MPZ
SDHC
TMEM132A
HOXA9
HOXA10
HOXA7
NEK6
CCDC3
ESRP1
ST6GAL1
CBX1
CALHM4
SNX11
MANSC4
KLHL42
POGZ
MPP2
ZDHHC5
CLP1
LHX5
ASPSCR1
HNRNPLL
NOTUM
CREB3L3
EHD4
CATSPER3
WIPI1
OAZ2
LRATD2
PHB2
MFGE8
TLE3
SLC2A8
CD46
ST3GAL4
NUP153
GAL3ST4
STAG3
GPC2
SMIM35
TMPRSS4
GTF3C3
C2orf66
ABL2
PRSS23
HAUS6
CLIP4
PHF5A
ACO2
H1-7
DOCK9
CRISPLD1
TMEM128
GBX2
PDIA4
FOXJ3
SPDYE14
SPDYE10P
MAT1A
CSRNP2
HNRNPDL
ENOPH1
ZSWIM3
ACOT8
TMUB2
SLC16A13
SLC16A11
RNF20
RGS2
MYC
MKRN3
HTR1A
MTURN
EPAS1
PMEPA1
STXBP6
PPIA
ONECUT2
DNAH6
SMARCA2
NADK
FOXJ1
COL14A1
ZNF687
ANGPT1
FGF19
HES6
RSPH4A
COA8
BAG5
ABHD11
TAGLN2
ELAPOR1
C1orf194
RPIA
BNIP5
POLI
BAHCC1
CPA5
TBL1XR1
ODC1
PXDC1
UBE2G1
MOBP
NIBAN2
DNAJC6
KRTAP8-1
SLC25A48
CXCL14
FURIN
PSMG2
CEP76
SRRM4
BCL2L11
CPSF4L
ARHGAP8
PPDPF
SOX14
CLEC9A
ZFC3H1
THAP2
CYREN
TEK
ALDH1B1
CRLS1
DAGLB
SLC2A11
DERL3
MTDH
LAP3
JUP
TRAK2
STRADB
TNFAIP2
LAMC1
JADE2
RAB30
CIT
ANKHD1-EIF4EBP3
ANKHD1
ATXN1
REG1A
CTTNBP2NL
NARF
CYBC1
TRIB1
SC5D
ZBTB8OS
RBBP4
APOBEC3F
KLHL24
BORCS6
HSD3B1
FGD3
ZNF304
NUP160
CDKAL1
KRTAP6-3
KRTAP22-2
ADRA2C
SLC33A1
TIAL1
CLOCK
TRPC3
ATP6V0D2
EYA1
GSTM5
KIF6
SHF
SLC25A25
MGST3
LMO3
TENT5B
ZNF358
MCOLN1
H3C8
H2BC10
H4C8
TNFAIP3
CPT1A
ARID5A
S100A2
LRRC69
SF3A2
PLEKHJ1
LIMK2
EXOSC2
C2
APOD
KCNE3
NOTCH2NLB
NOTCH2NLA
CLCN3
ZBP1
NEK1
TMEM17
USP35
KCTD21
DISC1
WIF1
UCK2
ANK3
TMEM205
CCDC159
RAB3D
MBLAC1
RABGEF1
ANKRD44
RBM20
ID3
TUT1
MTA2
NACC2
ALDH3A1
ZNF608
ZNF428
SRRM5
SYTL2
MTHFD2
TGM3
RNF43
GADD45A
ARFGEF1
CLIC5
LPAR6
LY75-CD302
LY75
DDX58
TNRC18
LOC100129484
UBQLN4
RAB25
LAMTOR2
NEDD9
PBX2
GPSM3
HEBP2
RIMBP2
CELF2
IBTK
GDF5
CEP250
PPP1R12B
UBE2T
DDX43
FGF12
MEX3D
MCM7
AP4M1
TANC1
GPR1
FAM120B
DLL1
ZNF77
PTHLH
PSMG4
LIFR
VGF
FNBP1L
GRIK3
NRCAM
C1orf100
HIP1R
ITGB4
CLRN3
SH2B2
ANP32E
TBC1D16
FMNL3
CCDC40
MSRB3
L3MBTL4
OPN3
CHML
CHD6
EIF4A3
DNAJC21
BRIX1
MANSC1
BORCS5
IGF1
APBA2
MCCC1
SPHK1
PIF1
S1PR3
DMRTA2
ATP5PD
C9orf47
LRRC30
CDC42EP3
EPB41L4B
TMEM68
TGS1
PGK1
CELSR3
NEDD1
SLC2A4
LPCAT4
LRMDA
NCOA4
DLAT
MTA3
TUBB2B
KCNG3
TSPAN13
UGT1A4
UGT1A5
MNT
HMOX1
CLK3
ROPN1B
MDM4
GRAMD2A
ETV6
PSEN2
MRO
DDC
GADD45G
STN1
SH3PXD2B
BEST1
FTH1
NHSL1
PDIK1L
PTPRO
AFAP1
LOC389199
MEGF9
SAXO1
RRAGA
TNFSF15
FGFRL1
MFSD6
WDFY2
KRT86
CLDN12
ZSCAN9
TPD52L1
FGD4
HERC3
ERV3-1-ZNF117
ERV3-1
SH3PXD2A
ZNF277
DOCK4
MUC4
CSK
LGR6
CA8
SEC16B
GTF2IRD1
DLX5
UCP2
SNTB1
ZNF184
KLHL25
MAEA
CRYGB
IGFL3
LAMTOR1
ANAPC15
CNP
IL22RA1
STK32C
LRRC27
B4GALT1
INSM1
USP6NL
KIF23
PARVG
WEE1
PCTP
MALL
SCN1A
UNK
H3-3B
RPTN
KIZ
SYNE3
SOX9
CEMIP2
ZNF273
EIF3E
DCPS
THEM4
BAZ2A
ATP5F1B
CDR2
ZBTB6
RC3H2
PAN2
IL23A
HACL1
BTD
ZNF180
RDH16
OR4N4
TRPM1
UNKL
GABRR2
TUBB
MDC1
H2BC8
H2AC8
H3C6
SOX8
LMF1
H1-3
ETV5
WSB2
CCT5
SELE
CALN1
PRDM2
GIMAP5
SRSF7
TLX3
PCDHB16
PCDHB9
PCDHB8
PCDHB7
H2AZ2
ZSCAN31
THEMIS
PLLP
MAP4K4
LYPD6B
ZCCHC12
LDB1
ZNF718
ZNF595
CC2D1A
C19orf57
ZFYVE21
XRCC3
KLF6
TTC23L
COL4A2-AS2
CCDC33
TRIM13
RFX5
YPEL1
SLAMF8
OR4C6
SYT2
EMSY
TOMM40
FOXO6
KNTC1
GPX6
RFX8
TDGF1
GLI2
CSRP2
BTG1
MIDEAS
PTX3
TUFT1
CADM1
VAV3
KIF2A
TUT7
PPP1R1B
ZNRF3
RNF157
OR52N1
ZCCHC3
C20orf96
BAZ1B
TLN2
SLC34A1
PFN3
ANXA2
LRRC72
SCRT1
OAS1
ZC3H7A
PROSER2
ADAMTS19
TPRG1
PPARGC1A
LMOD3
NKIRAS1
RPL15
MAML2
USP22
NR5A2
GLRA1
ZNF195
DPP3
NEFH
TTC28
ID1
CENPX
LRRC45
CITED2
SDHD
NID1
SIRT7
PYCR1
MAFG
ZNF106
SNAP23
ZBTB38
ADRM1
CCDC88A
BBS7
SYT7
CEP68
SLC7A1
DDB2
ACTB
PSMB7
ATAD3A
NEURL1
BRINP2
ASTN1
FAM136A
MIDN
ATP5F1D
ZNF117
EMP2
RNF38
SCN5A
LIMCH1
URM1
CD36
KLF9
SPATA12
PRUNE2
C1orf54
ZNF250
PPFIBP2
ACVR1B
CIART
MGAT5B
LZTS1
SLC66A2
HSBP1L1
FAM72C
FAM72D
RRBP1
ARHGEF38
KLHL2
FMNL2
PLEKHG4B
PCED1B
AMIGO2
ZFP62
ZNF107
VOPP1
FOXD1
PWWP2A
TCF4
ARHGAP42
LNX1
NFE2
RBP1
USPL1
KCNJ15
CDK5RAP2
POLR2M
HNRNPAB
RAB11B
WDFY1
MAST4
FIGLA
TAX1BP3
EMC6
KCNK1
SLC1A3
NTMT1
C9orf50
FKBP9
WIPF1
RNF145
ELK3
SASH1
CTIF
KCNA6
PRKX
SLC9A2
C8orf76
STAT3
MNX1
DPYSL5
LMO4
COL17A1
HSPA13
ACSL3
PDP1
ANO1
DUSP7
TMEM211
BMERB1
EIF4A2
C2CD5
OARD1
NFYA
NAXD
NAP1L4
LGALSL
NKD1
LRRK1
DIO2
PNRC1
GREB1
FAM76B
CEP57
HECTD4
TNFAIP8L2-SCNM1
TNFAIP8L2
CARMIL1
LMO2
SEMA6C
HDDC2
VTCN1
TRMT2A
RANBP1
PPME1
C2CD3
SHQ1
TAF1A
MRPS2
C9orf116
POC1A
TLE1
RFLNA
SLC25A11
RNF167
PFN1
GP1BA
EXPH5
SNCA
AGO1
ZSWIM4
XRCC5
PLS1
CDCP2
GPER1
DST
FAM91A1
CTLA4
PARP16
NELFCD
TOMM40L
APOA2
NR2E1
ARMC3
SHOX2
RSRC1
EID1
SGIP1
STMN1
SACM1L
FILIP1L
SDE2
CCNJ
MRPS18A
UBR3
METTL5
PON2
PPCDC
RERE
USO1
POFUT1
PLAGL2
ATRX
DNMBP
GOLGB1
NDUFS5
ADAMTS17
OSBPL1A
LINGO4
NBPF10
PLXNB2
H4-16
H2AJ
PARP1
FSCN1
CASTOR2
MRLN
HOXC9
HOXC8
ZBTB2
ZCCHC14
CDIN1
PELATON
VCAM1
KANSL1L
WDR36
CSRNP3
ZNF92
SLC35E2B
BAG3
TENT5A
DMRT3
ADAMTSL4
TESK2