ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286341 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◣ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
SLA2
SMARCA2
ZNF483
APOBEC3F
TMPRSS11E
WDR55
DND1
MED12
IL2RG
NRARP
SHC1
FLAD1
CKS1B
REST
DPPA5
SALL4
NRG1
VCAN
GDF11
VENTX
UTF1
TENM4
PSORS1C2
MFSD4B
ZSWIM3
ACOT8
NDUFA4L2
STAC3
TERF1
OTX2
ZBTB8OS
RBBP4
LOC102724770
DGCR6
SGK1
TMC5
PHC1
DUX4
FAM222B
MAP2K3
ASIP
RHOB
ESR2
RNASE6
EDDM3B
MUC4
ALDH1A2
SOX6
TCEAL3
PIM2
RCN1
RIPK1
FOXP4
TDGF1
LRRC2
TRIP4
PCLAF
MORF4L2
KHDRBS1
KLHL3
NR5A2
SOX2
TARS1
MOBP
MRPL20
EOMES
SAMHD1
SYBU
MTHFD1L
LRRC10B
BCOR
HPCAL1
FAM227B
CDX2
SPIC
PEAK1
HMG20A
BRWD3
ZYG11A
C9orf85
ABHD17B
TRPC4AP
WFDC8
OR6A2
ISOC2
ARHGEF38
DDX46
GAD2
ZNF608
FEZF2
CAAP1
NAA50
ATP6V1A
ID3
TRMT10C
SHCBP1L
SACS
TENT5B
CADPS
TMPO
GIMAP5
DAGLB
LRRC36
FRG2C
SERINC5
TCF7L1
PSMD9
HPD
DDX43
SLTM
SNRPN
MACROH2A1
LARP1B
WDR25
WARS1
ARSL
RPS24
PRICKLE1
LEFTY2
PRMT2
FAM227A
CBY1
BEND3
POU5F1
CELF4
RNASET2
GLYATL1B
SLC35A5
ATG3
ANAPC4
KIF11
HESX1
ZNF780A
NANOG
SMPD1
SSB
GSX2
IL34
DUSP6
TPCN2
FAM200B
DSP
FGF1
KIF21A
HOXB1
DACT1
FZR1
NPSR1
CAPN3
ECE1
HNRNPA3
KIF15
KIAA1143
SFRP2
ZNF398
CNGA1
NIPAL1
RMND5B
OPALIN
FZD8
ENSA
MTRNR2L1
ETS1
TRAPPC8
PITPNM2
GATA3
ITGB3
ZNF781
COL17A1
ACOXL
IL13RA1
NRROS
SCGB3A2
PRSS48
TRIML2
LIPK
RASGRF2
LDB2
ANXA2
GATA6
HELLS
ZMAT2
SASH1
ZNF343
TMEM63A
LEFTY1
CRYGB
NTRK2
FRG2
KDR
HSCB
CHEK2
MKRN1
APOBEC3G
ZSCAN2
CLCN4
APOBEC3D
APOBEC3C
PAK1
TSKS
AP2A1
ART1
SPRED2
CPA2
GSN
SLC2A14
NMNAT2
GABRQ
ALDH2
PRDM14
FAM174B
ATF4
RNF220
MIEF1
CDX4
ITGB5
PRPF39
FGD3
DUSP29
HOPX
PHETA2
NAGA
BDH1
BUB1
UHRF1BP1L
MBNL2
MFHAS1
MAGEA10-MAGEA5
MAGEA10
ANKRD1
GCSAM
BCAT1
LRRTM4
FUS
SLC35F6
ZFYVE1
RAB40AL
UGT1A6
UGT1A7
MBOAT2
CSDE1
SGPP2
OR5AR1
PROM1
BTG2
KIF5C
ABO
CAPZA2
UTS2
IFRD1
KCNMB4
CRH
SEMA6D
GAS1
DCAF4L1
SLC30A9
EFNB2
OLFML2A
NR6A1
SLC38A9
C10orf95
MFSD13A
PLPP3
CTNNA1
LRRTM2
SLC66A2
HSBP1L1
ARHGAP42
TUBB
MDC1
SMAGP
PEA15
SMAD7
MYSM1
PYGB
LRRN3
SMC6
GEN1
PIPOX
NACAD
CACHD1
GLRA1
MTRNR2L8
LHX2
TNS3
NBDY
RASA1
FOXI3
OCM
MRPS25
TFAP4
TBC1D22A
TET3
HCN1
MOB1A
RPGRIP1
NBPF12
SLC34A1
PFN3
SCHIP1
ZNF600
STOM
NCOA5
GLDC
DNMBP
CYP2S1
SGMS2
ZNF532
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
DOCK1
PLSCR4
GCNT2
H3C15
H3C14
H2AC19
H2AC18
ATP8A2
MAP4K4
EXT1
LHFPL5
CLPS
SPATA13
SLC23A2
FXN
SNURF
UBAP2
CSGALNACT1
SRSF12
TCEAL5
ANKRD40
LUC7L3
WDR74
STX5
ZNF674
SYT2
GTF2I
CCDC169-SOHLH2
CCDC169
YIPF4
NLRC4
SLC7A5
BICRA
CCDC200
CD99L2
MUC3A
SRRM4
PQBP1
TIMM17B
FLVCR1
SPATA45
NDUFV1
RPL21
CD9
RPRD1A
CSAD
ZNF740
GALNT8
ZDHHC14
MSTO1
MTF2
TRIT1
OR2G2
LRFN5
SOCS3
NFE2L1
PPEF2
DDX39A
PKN1
CHGB
GOLGA6D
FAM107A
CFLAR
RNF17
DNMT3B
ZBTB40
PSME3IP1
RSPRY1
TRIM24
MDN1
OSBPL2
LRRC70
ARRDC2
SLC1A3
GRIP1
LYPD6B
BRINP2
ASTN1
KDM5B
FOXP1
SRPK2
OLAH
LRRN1
NFE2L3
ICMT
HES3
PER2
DIDO1
GID8
TJAP1
NCBP3
FAM136A
UBXN10
PLA2G2C
TNIP1
OR7D2
RPS3
TXNL4A
PMEPA1
PRPS1
ITPKB
COL6A2
HDAC9
RBM22
BDH2
MTMR2
GUCY2C
MED4
RIF1
NDUFAB1
NES
PUF60
NRBP2
TMEM132B
HOXB2
STMN2
DNAJB2
HAUS6
B4GALNT2
PSMB2
TMEM70
LY96
ZNF285
ZNF486
LANCL3
SORBS2
SOCS5
AKAP1
BOD1L1
SCGB1C2
SCGB1C1
ODF3
YAF2
PTMA
AJAP1
CYP4A22
MX2
NDUFAF3
IMPDH2
DALRD3
OBI1
DET1
IFNE
SPRY2
OR6Y1
PLTP
SRD5A3
PDE1B
NKIRAS2
DNAJC7
MPZ
SDHC
MCHR1
RPP14
HTD2
ERVH48-1
GNA13
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SOX21
UNC13B
TGIF2-RAB5IF
TGIF2
EID3
SOX4
GPR21
LZTS1
FZD2
CHFR
NDUFS5
UQCRHL
SIN3A
KLF5
SNX19
TMUB2
MVB12A
BST2
FGF4
FXYD6-FXYD2
FXYD6
PNMA1
SLC25A29
PDCD7
ATXN7L3
KIFBP
DNTT
LAPTM4B
FZD10
CCDC130
ZNF717
SYTL3
DYNLT1
PIFO
AGO1
CER1
RBP3
CNBP
PLAGL1
PTBP2
OR5K3
AHCYL2
HHIP
NAV2
GOLGA6C
BLOC1S2
BICD1
NEBL
PLXDC2
PARN
BFAR
MICA
NDUFB5
MRPL47
FGD4
VCPKMT
TMEM68
TGS1
TNFAIP6
PCBP1
PTPRN
GUCA1A
PLEKHG5
RPS10-NUDT3
RPS10
JPT1
SYN3
ZFP3
TCHP
ATP8B4
SPATA2
SPATA4
GCNT1
ZP2
NAB1
DMXL1
WDHD1
SOCS4
SMCO1
GOLGA6B
LPCAT4
MAP3K7
NUP107
UGP2
ZNF649
SRP14
RPUSD3
AMER2
DENR
MCTP2
ST18
TMEM167B
MAST1
URGCP
NEUROG1
RTBDN
URGCP-MRPS24
CD200
PTPN12
SLC25A16
CMIP
MT1X
MT1H
MT1G
RAD54L2
TJP3
PIP5K1C
PPP3CC
ZNF770
HUS1
CECR2
ARL15
LIMCH1
WDFY1
COX20
OR2A4
CTAGE9
ARID2
DHDDS
AIRE
PGM2
UPP1
ASXL3
FAM98A
SAV1
PRKG1
FRMD7
AASS
KCNA4
URM1
GBX2
TUBB2A
NLRP12
GABRB3
PDCL
AK4
CCDC9
PHAX
ALDH7A1
SFRP1
PPP1R15A
CDC42EP4
IFIT3
SEC14L5
CTTN
ABCF3
OR5H1
TRIM14
OR5H14
PFKP
AP2M1
TFCP2L1
PLXDC1
TNFRSF1A
GOLGA6A
ARSG
SLC16A6
THOC2
SULT1B1
ADO
SPIRE1
GABRR2
CTSF
ST3GAL6
HEY2
GAST
FBXW11
APELA
C16orf78
C8orf76
PTCH1
BCL2L1
ZNF565
VSIG10
GJA10
FIGLA
ZNF875
MLN
ITPRID1
FOXB1
KNDC1
GPR85
FOXD3
E2F7
STAG2
HMGB1
FBP1
C1orf127
TRIB2
SEC22B
PXDC1
KNTC1
PPAT
SDCBP
CRYBB1
CNR2
NATD1
GOLGA7B
RHBDD2
ZMIZ2
HK2
PHF8
RAB4B
MIA
G6PC2
OPA3
PRR14L
DEPDC5
HARBI1
ATG13
GXYLT1
TCL1B
CD22
RRNAD1
ISG20L2
DMAC1
SCAF4
PRRC2B
CCN3
MSL2
ECHDC1
NARS1
NCBP2AS2
NCBP2
PRCP
DDIAS
CA5B
CLEC9A
NPS
TMEM41B
P2RY12
SALL3
ZC3H12B
SELENOT
IQSEC3
PALM2AKAP2
RESF1
KRT34
FAM120B
DLL1
RPL24
CR1L
CSRNP3
LMCD1
FGFR2
EBF2
PRODH
LOC102724788
AKIRIN2
KLF7
LBP
C19orf25
IRF6
SMCO2
FDFT1
ANOS1
SAMD5
SLC35G4
RXFP3
ADAR
PEX12
AP2B1
ZRSR2
DIP2C-AS1
DERA
TACSTD2
EIF4G3
DNAJC25-GNG10
DNAJC25
EXOSC9
FAM168A
TBCA
XPNPEP1
GAGE2B
ZNF75D
ETDC
TCP11L1
EGFL6
TALDO1
MRS2
UQCRH
LRRC41
THEM4
TMCC3
PPP1R16B
SULT6B1
RTP4
CDK17
TRIM64B
PRKAG2
BIN2
RPS6KA2
CLDN9
CLDN6
ADA2
TNRC18
LOC100129484
ZNF34
ANKRD6
ZNF517
RPL8
DACT3
RAB30
C10orf99
BUB1B
MEIG1
DCLRE1C
PRDX3
ISL1
ZKSCAN1
CANT1
SLC38A3
STS
DNAJC14
MMP19
ABL2
ACSS3
RNF138
LIMS4
OSBPL8
TTC13
ARV1
PCLO
KLHL12
ZFX
IL1RAPL2
MANSC1
BORCS5
NBPF19
NBPF26
NBPF14
IL1A
PRORP
PPP2R3C
ZC3HAV1
MAP1LC3B2
IRAK1BP1
SLCO4C1
CA8
NBPF15
ESCO1
LRIG2
FLRT2
HBG2
HBG1
FAM153B
USP32
PRKAA1
GALNT11
SPEN
ZNF341
ARHGEF12
ST8SIA4
DEFB110
NUCKS1
ID1
KMT2B
PARP1
ONECUT2
SLC2A11
TKT
ZIC2
ADRM1
RNASE10
PRR7
CLEC2L
DDX23
MPI
SH2D4B
IHH
PIGZ
SPTBN1
PMS2
AIMP2
RPS6KA5
RBM3
CBFA2T2
SLC20A2
EPM2A
PPP2R2A
SERPINB5
METTL11B
PTAR1
GPR89B
DDX3X
RAB15
FNTB
ZNF217
MRPL22
GEMIN5
GPR1
MAP3K1
ELP1
ABITRAM
RMND1
ARMT1
RAPGEF5
NCOA7
SLC17A5
HELB
CFHR4
RAB39B
ZBTB18
PRUNE2
NBPF9
H2BC21
H2AC21
H2AC20
BOLA1
AMPD1
DUSP12
TCP1
MRPL18
TNRC6A
PNLDC1
POGZ
BAZ2B
LCA5
CSF2RB
CEP192
SMARCAD1
RAPGEF1
ZNF100
H3C8
H2BC10
H4C8
RPH3A
SCN5A
GXYLT2
FAM180A
MARCKS
S100A16
TP53
WRAP53
TRIM56
ZNF106
SNAP23
LGR6
C1R
CRLF2
HOXA1
CGN
ZNF518B
CDK2AP1
KRTAP5-9
KRTAP5-8
CRACDL
MSL1
SLC6A12
MALSU1
HOXA2
PIGBOS1
PIGB
ZNF805
AURKC
UPK1A
THAP4
ATG4B
PLAAT4
PPP2R5A
CDH4
HCLS1
SOX5
ATXN3
SESTD1
ATG10
EPB41L2
REM1
DEFB124
PDCD2
PTPN2
CMTM4
TRIM71
CALHM4
ARHGEF10
KANSL1L
MAGEA11
FAM240A
SLC9A4
NRG3
STMN1
MS4A12
NRG2
SLAMF1
NEPRO
AKAP7
HILPDA
RNF135
PLEKHB2
EHBP1
TMEM52B
OLR1
GLI2
TRIM48
TESK2
MMACHC
PIN4
ZSCAN10
MOG
UAP1L1
SAPCD2
HAUS5
CARS1
WDR44
CHI3L2
CLEC5A
RNF19B
MRPS23
LOC100996842
NUP205
MPDU1
SOX15
CATIP
ZNF878
PTPRF
TMX4
MKS1
SAMD4B
LRP6
LPO
HECW2
EFCAB1