ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407083 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◣ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

THOC3
NRARP
PTHLH
TGIF1
PYCR2
KRT31
NAV2
MYEOV
PHYHD1
LTBP2
SMIM3
PADI2
SINHCAF
MANBAL
NDUFB5
MRPL47
ITGB8
MTF2
MED25
FUZ
FAM227A
CBY1
CDC42EP3
KRT1
PTMA
CAPNS2
LFNG
NEK6
PLPP2
PDE4DIP
CLCF1
HMGB1
EAPP
RPGRIP1
FHL2
RFLNA
ERG
WEE1
FBXL19
VWCE
ZSCAN2
NOTCH1
PARP16
PAQR8
TMEM200C
PLSCR2
OR7C1
OR7A5
OR7A10
WDR74
STX5
CCL24
CDH13
MAP3K2
NEUROD1
COL21A1
SLC25A25
CHST6
NDST1
PHLDB2
ZDHHC3
EXOSC7
ATP6V0D2
SRI
RIN3
DST
ACP6
PTPRH
IQCH
AAGAB
VAMP8
VAMP5
TJAP1
MAGOHB
PUS10
PEX13
GLI2
CUEDC1
RDX
KMT2B
ERGIC2
HNF4A
LAMC1
STK31
CYP1A1
PTGFRN
LYPD1
HOMER2
ARHGAP5
SRBD1
ABCC1
MBLAC1
LEMD2
CEP63
ANAPC13
ABCC2
DNM1L
NAP1L4
ENKUR
TRPV4
GALNT10
CASQ2
MYL12A
F11R
VOPP1
CELA3B
MAST4
CLOCK
CPNE2
DDX17
GPR39
LRRC25
KLHL6
ID3
CDKAL1
MAP3K20
OSER1
WDFY2
KIF13A
PHACTR2
H3C15
H3C14
H4C14
SHISA7
SYBU
HGS
ARL16
CHD6
SCGB1A1
FGD3
ABLIM1
TMEM107
KRT6A
DPP3
KIF6
POMT2
GSTZ1
GRK6
MAMDC2
LIMK2
C1orf116
IRAG2
ITPRIP
RALGDS
CBLC
NOTCH2NLC
NOTCH2
IL1F10
IL36RN
METTL27
TMEM270
MUC1
PLA2G6
PER2
MS4A2
NTSR1
PTPRB
EPHX1
HAO2
AGPS
ADGRG7
ZNF436
TMEM205
CCDC159
RAB3D
PSG1
IFRD1
NEBL
ISL2
CNP
MUS81
CFL1
OGA
KLHL2
DENR
CPT1A
LYRM1
DCUN1D3
SPRY4
STEAP3
MBP
GSTA3
SDC1
FGF19
ITGA6
GREB1
MCM7
AP4M1
MANSC4
KLHL42
CA6
CNTN1
ZNF608
FAM220A
C16orf74
SLC33A1
LIMS1
ST8SIA1
TRIM48
PHF5A
ACO2
PTPRS
SPTSSA
FRY
MERTK
TMEM88B
ANKRD65
OPHN1
ARIH1
ZMYM1
RGS2
TNS4
ZNF57
PYGB
HIPK1
RHOBTB2
HES1
FAM193B
VIT
NECTIN4
MCCC1
VAPA
HSD17B3
FAM50B
GFM2
SYT2
LOC100509620
ETFRF1
CFAP94
IRX2
C5orf38
DOCK5
KRT19
KRT15
ZFC3H1
THAP2
NDUFS5
PSME3IP1
RSPRY1
PIF1
H4C15
DSP
TNFRSF21
AMN1
RGS20
RNF13
KRT39
PRTFDC1
ALPK2
BCAS1
DCLRE1B
AP4B1
SPHK1
ITGB1
NDE1
MARF1
LOC105370980
HERPUD2
MEF2C
CCDC88A
DYRK4
ST6GALNAC2
RAB12
UNC50
COA5
SH2D1B
KIAA0040
TMEM63A
DAPP1
RBFOX2
ZNF428
SRRM5
PLA2G4B
JMJD7-PLA2G4B
JMJD7
SLC7A5
PRR15
PHAX
ALDH7A1
CTSV
RASGRF2
CTSB
PMEPA1
OGT
UNK
H3-3B
OPN5
ACP3
TINAGL1
SLC12A7
DNAH5
STK24
DCTN1
CYP2S1
CHD9
FOXJ3
TAGAP
SMCO1
NTMT1
C9orf50
RPS6KA1
G3BP1
PKP2
TPRKB
TMCC1
ETS2
LDHD
ARNTL2
SLC20A2
SLC2A8
CPSF4L
MRPL21
IGHMBP2
SPATS2L
NOTCH2NLB
NOTCH2NLA
FURIN
STRA6
MAST1
RTBDN
SLC25A11
RNF167
PFN1
GP1BA
ZNF37A
KRT86
MYOF
CCL26
VASH2
PTPRM
EIF2AK4
SPINT1
EML2
TNFAIP8
MELTF
MTRNR2L1
GRAMD2B
SLC26A9
IGSF10
RABGAP1L
TLX3
SMCP
PTCHD4
WSB2
CTSH
CDK12
MED1
E4F1
ASB2
DNASE1L2
TM9SF1
AHCY
IPO4
MFGE8
TMEM154
NRCAM
EFHC1
MT1F
MT1B
MYL12B
EGFR
TBPL2
LARP6
FZR1
RBM39
DOHH
XCR1
HDAC9
CEP20
KLHL5
UACA
WBP11
C12orf60
FAM107B
PPP1R37
NPIPB12
MAPK8IP3
TMEM156
CLDN17
CORO1C
ID1
ZNF503
LECT2
CAPRIN1
TJP2
OLFML2A
NR6A1
ZNF710
ZNF365
HID1
COPS7A
FEM1B
CFAP54
NIBAN2
SIX2
MAP3K9
TSNAXIP1
RANBP10
CLIP4
EVA1A
BCL9
NCBP2AS2
NCBP2
ELFN2
COL4A2-AS2
CHD1L
CCDC57
FZD1
PRKAB2
DENND4A
NPIPA3
NPIPA2
IGSF3
UBR2
SUFU
ACTR1A
OARD1
NFYA
TMTC4
ECT2
LAMP1
AHNAK2
CDKN2AIP
STN1
GET3
SVIL
CCDC192
GRK5
NR1D1
ARPC1A
RASA3
COA6
ESRP1
SLC7A11
CAVIN1
IFT80
KDM2A
SMC4
GNLY
GDF5
CEP250
RAB5C
FAM83G
IL23R
KDM3A
IKZF3
LGALS14
CCN4
PIK3C2G
FMN1
AKAP9
TTF2
HNRNPC
SLC25A45
FRMD8
OLFML3
OAZ2
TSPAN14
SLC16A13
SLC16A11
CTNNAL1
TOMM40L
APOA2
N4BP1
SLC39A12
PCYOX1
TIA1
SLC7A8
SYNGR2
SLX4IP
MKKS
SLC25A27
CYP39A1
KLRK1
NUP160
JUP
CNIH4
MYC
ITGB6
RAPGEFL1
PRRG4
SPATA12
SLC22A23
HEXB
RPTN
ADGRG1
DDX47
FAM183A
TMUB2
PRUNE2
LRRC8A
KYAT1
CDCP2
MAFK
KNTC1
TBC1D17
AKT1S1
PNKP
NDUFS2
ADAMTS4
ETV1
BICRA
HNRNPDL
ENOPH1
RPS6KB2
PTPRCAP
ANKRD36C
MTHFD1L
LCA5
DDR1
S100A6
SLC25A5
TFB1M
ATXN1
NTF3
RNF31
PSME2
EMC9
PSME1
CEP120
ITGBL1
RBBP8NL
RNF44
CDHR2
NINJ2
HES2
FIGNL1
SMAD5
C11orf86
ABHD3
SHF
EMP1
AADAC
KPNA4
TMEM41B
ZSCAN9
TM4SF1
ANO1
FLNB
ADGRF4
PDIA4
KLHL24
GABARAPL1
MTMR1
CLSPN
SPRED2
ABCC10
SH3GL3
CD2BP2
VGF
OR1K1
EIF1AD
CST6
BANF1
APOBEC3B
FYCO1
GSAP
SMAD3
ZNF195
KLHL38
POLG
PCED1B
AMIGO2
MTCL1
PISD
POLDIP3
GOLGA7B
C2CD5
G3BP2
EXPH5
RASGRF1
GAST
ACSL1
MTUS1
NFIB
XPNPEP1
C3orf49
TBC1D23
KRTAP3-2
CFAP20
KRTAP3-1
GRAMD1C
GJC1
MAP4
ZNF775
CMPK1
IL10RB
SOX6
SH3BP4
PLEKHG1
DDX11
C11orf58
BMP5
MTRNR2L8
CYTH2
BORCS6
CRYBA1
TBX4
LMNTD1
BCAS2
ASB5
ALKBH8
ETV4
GPRC5A
HTR3C
FOXP1
LIN28A
ING4
MKNK1
MOB3C
OTUB2
STAMBP
ZNF785
LGALS8
SPAG4
DVL3
CCDC33
MEIS3
H4C12
SIPA1L1
H2BC15
H2AC15
H4C11
CLDND1
SLC35D2
LDHB
ADH5
HSBP1
NCOA4
METRN
ANTKMT
FBXL16
PKM
IL4R
MMP10
PGBD2
CTXN3
SPOCK2
PIN4
ZBTB6
RC3H2
SPAG9
RIN1
MICAL2
GNAL
SUN1
GPR19
CHMP1B
SRGAP2B
PRDM10
SRGAP2C
MOV10L1
BRMS1
B4GAT1
S100A10
SOX9
PACSIN2
UAP1L1
SAPCD2
CSDE1
CCDC30
NEK10
CDCA4
ZMYND12
PPCS
PPP1R14D
SPINK1
ENSA
SLN
TBC1D2
PIGX
CEP19
FAM83B
DHX8
DGKZ
PSMD3
HMGCS1
TCEAL1
YLPM1
INPP4B
SAXO2
EFL1
NUDT13
ADGRF2
PCYT1A
UBAC1
WDR36
SDCCAG8
CEP170
SFPQ
DLG1
TM4SF20
SIGLEC15
MTRNR2L2
MSH3
DHFR
ZNF106
SNAP23
OR10V1
MAN1A2
NUTM2F
RNF43
SIRT4
KLK6
IRF2BP2
KSR1
GUCA1B
DCUN1D2
INTS9
HMBOX1
MSANTD4
ITPK1
ETV5
ZCCHC14
DNAJC21
BRIX1
LRRFIP2
TEX12
IL18
LNX1
CYP19A1
H4-16
H2AJ
YARS2
SCNN1A
LTBR
RIPOR3
CNKSR1
NDUFS8
TMEM255A
TCIRG1
DMRT2
SH3RF3
CATSPER4
CDKN1A
TBC1D31
KCNMA1
EIF3E
PTGER4
ASCC2
KIF25
ZRANB2
H2BC17
H2AC17
OR2B2
PF4V1
CXCL6
IL31RA
TUBB8
ARSG
SLC16A6
FJX1
LRRC23
ENO2
CLCN3
PPP1R3G
MFSD2B
FGF1
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
GBA
APAF1
NFE2L2
PPP2R5B
ATG2A
VSIR
IKBIP
BCL2L1
TOMM40
TAF12
PCCA
PNLIP
NCEH1
ATP1A1
KRT33A
SESTD1
KCTD4
GFRA3
NPB
ANAPC11
ALYREF
MMP12
KPNA7
WBP1L
LMNA
TRPM1
WDR33
RPL27
IFI35
HSPA13
NAIF1
SFR1
TMEM260
ZNF268
CCT7
HHAT
BICD1
PEX12
AP2B1
SLC35F6
SART1
MPC2
DCAF6
CWC22
TCTEX1D2
GPR150
PCID2
CUL4A
ST6GALNAC4
PIP5KL1
SEPTIN9
PAWR
STON1-GTF2A1L
CDK5RAP2
STON1
LOC100505841
GPR68
UGT1A6
VPS37B
NKD2
DIABLO
PGM2L1
MIA3
NPIPB6
WFDC3
DNTTIP1
UFD1
CDC45
SMO
CNPY3
PTCRA
BAHCC1
STRN3
AP4S1
ANKRD36
NUDT19
BCL9L
GPR87
HSPH1
PHB2
UQCRQ
LEAP2
GDF9
CCDC146
KBTBD6
COMMD2
TLE3
TRIM45
CTTN
MS4A6A
VWA5B2
ATP1A2
SRP54
SHCBP1L
SIPA1L2
CNKSR3
ZCCHC8
HMGN4
B4GALT1
UBAP1
STAC
TRIP4
PCLAF
ANXA2
NFKBIA
NPDC1
ENTPD2
RELA
OR10S1
NFIL3
IDS
CPNE7
C1QTNF7
TUT1
MTA2
VDAC2
C12orf71
PXMP4
ZNF341
ABI1
CCT2
EPHB3
PIK3R3
NOL3
KIAA0895L
EXOC3L1
E2F4
PRORP
PPP2R3C
CYREN
ATAD2
NDUFS7
ANKRD13D
XRRA1
SPCS2
CLDN16
DNAJB1
MAP3K7
TECR
CDH17
AHR
MYO6
SLC25A32
DCAF13
UPP1
DDX5
CEP95
POLG2
NEDD4
LOC105372977
TENM2
PARP2
CHN1
ZFX
EGR3
HEXIM2
INSR
TMEM221
C19orf33
YWHAG
OSCP1
MTMR11
ANKRD35
PRMT5
MAP2K1
NUDT18
MICALL1
GGT1
MIOS
MYO5A
GSN
ATXN7
H2BC8
H2AC8
H3C6
THOC7
KCNJ15
ABHD4
DAD1
SOST
MRPS23
CYP2B6
GOLGB1
GLI3
TRDMT1
PUS7L
IRAK4
MAGT1
COX7B
COX8A
RFFL
ATAD3A
PLD1
MLPH
CYP27C1
LDHAL6B
CHST7
CD109
TTC6
FOXA1
CASTOR1
EPB41L4B
PLK3
TCTEX1D4
BTBD19
SMPD3
CX3CL1
VMAC
NDUFA11
CAPS
USP48
ARSD
BAZ1B
QSER1
AP5S1
CHD2
MTA3
KCNG3
C11orf65
ABCC3
CREG2
EFHD2
ALOX5AP
SNRNP35
L2HGDH
DMAC2L
KLF1
GCDH
DNASE2
H4C3
H1-6
GNA13
CREBL2
PTPN6
C12orf57
PTPN3
NKIRAS1