ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PMF1-BGLAP
PMF1
COL23A1
MAMDC2
WDR74
STX5
AFAP1
FAH
CYP4F11
SERPINA5
MUC3A
PTPRN2
NGB
FRG2
RGS19
OPRL1
LKAAEAR1
ACSL3
SNX16
SCML1
LOC105370980
MTF2
EPN1
FRG2C
ZNF229
H3Y2
SACS
ATXN2L
IGFBP3
ART1
BTNL9
FAM240C
LOC102724770
DGCR6
OSBPL2
SLC6A5
ESPNL
ZNF285
TMEM216
C1orf198
FLT4
ZFHX4
MAGEF1
OR2T1
GADD45G
TTYH1
SKIDA1
LFNG
PBX2
GPSM3
CAMTA1
MSI1
BICD1
ANKRD18A
LRP2
UCKL1
HMGB1
AZU1
PRTN3
TRIM48
CSRNP2
MUC1
CRYAA2
CRYAA
CRLF2
C1orf216
STK32C
LRRC27
NRARP
MMP8
RTF1
ERLIN2
APBB2
CORO2B
TMEM200B
ONECUT2
CUEDC1
SPIN1
PLEKHB1
CSRNP1
HDAC9
LZTS1
MID1
CAPRIN1
HMGN1
HES5
PANK4
BZW2
ANKMY2
HNRNPDL
ENOPH1
FABP7
CCNG2
SMPDL3A
PPP1R15B
ARID2
ACSL6
KRTAP4-8
KRTAP4-12
KRTAP4-11
KCNJ10
CSPG5
FAM120B
DLL1
TMEM167B
TAF13
SLC6A9
KCNIP4
LGR6
CLASRP
ARIH1
NES
PDE4B
TMEM178B
ZNF778
SLC22A31
FEZF2
KLF7
CITED2
FRG1
SOX21
IQSEC3
ITPK1
LOC100996750
KRTAP4-7
ITGA2
ADAMTS9
ZNF717
DRD4
RGR
LRIT1
TMEM242
CHRNA9
ZNF775
NEU4
ACSL1
MEX3D
ZNF511
TUBGCP2
BMF
UNC45B
NLE1
KRTAP9-6
KRTAP9-7
DNMBP
RTN4
OAZ2
LRTM1
RUBCNL
FAM181A
SLC28A1
RPS21
DPY19L1
EAPP
E2F1
SLC7A5
TUBA1C
SPDYE14
SPDYE10P
ZNF277
DOCK4
PHAX
ALDH7A1
CDC34
IQCH
AAGAB
TSPAN13
KDELR1
GRIN2D
ADCYAP1R1
MTDH
SNCAIP
COL6A2
DDX17
ITPRIP
ANKRD6
RUNX1T1
POU3F2
GPIHBP1
ADAMTS14
BCL9L
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
TRIM2
USP2
AGO1
GADD45A
NDRG2
ANKRD18B
TPPP2
RNASE13
LAMA5
DUX4
VANGL2
OTUD3
KRTAP4-4
KRTAP4-3
KRTAP21-2
CTAGE15
PPP1R10
MRPS18B
ATAT1
APC2
KRTAP2-4
KRTAP2-3
PYCR2
HBP1
SIPA1L1
PTPRK
TECRL
APP
IFIT1B
ARHGAP11A-SCG5
ARHGAP11A
MTNR1A
PLXNA2
OR8U8
OR8U1
ENO1
KLHDC8A
RPEL1
EPHX1
MUC2
UBTD2
STX6
PHF24
OR2A7
CTAGE8
CTAGE4
POTEH
NODAL
UNC5A
CXXC5
FGFRL1
STAU2
KMT2B
MARCKS
PAQR6
BGLAP
FOXJ1
MAN2B2
FMNL3
LPP
CDK5R1
CCDC200
LINGO1
SHF
CLEC19A
TRAF3IP2
KRTAP4-6
KRTAP4-5
PCDHB5
ADGRB2
NDUFB5
MRPL47
KDM2A
LRIG1
GNA12
HES6
NREP
RHOJ
WNT1
CDKN1A
ADRM1
TRIM8
KRTAP2-1
KRTAP1-1
KRTAP1-3
TMPRSS5
ARHGEF2
POR
RALGDS
UNCX
LRRN1
RGS3
SPHKAP
KIF21A
HIP1
ACTR3B
KCNQ3
ESRRA
CATSPERZ
FANK1
TP53INP1
ATN1
PITPNM3
RIPOR3
TRAPPC3
MAP7D1
SFXN5
GALR1
PTGS1
CRB2
TRIB1
INMT
GP6
LMCD1
ZFHX3
C1orf127
PER2
VOPP1
UGT1A7
TRDMT1
ZNF358
CCDC88A
MCOLN1
FZD9
ADNP
NFIB
C16orf46
EHF
LMO3
ODF4
NCOA4
TRMT1
NACC1
NPDC1
ENTPD2
TEAD2
DKKL1
PHYHIPL
FRMD5
KRTAP2-2
RAB6B
UGT1A9
FAM89A
C16orf96
SPATA3
VPS4A
GFAP
AQP5
AQP6
PTMA
GABRR2
SLC38A3
KLF12
ZFP36
PLEKHG2
CCSER1
MED25
FUZ
NUAK2
MYMX
SLC29A1
ZBTB25
ZBTB1
CNDP2
PIPOX
DDR1
CDK5RAP2
KRTAP4-9
TNRC18
LOC100129484
SCGB1C2
SCGB1C1
E2F6
COX20
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
FAM227A
CBY1
NUDT19
CTAGE6
ICMT
HES3
PLCG1
HBM
HBZ
ITGB8
FGFR2
LIMCH1
TES
NTN5
HSPH1
PREP
KANK1
PALMD
CASTOR2
DOK5
SRSF6
BSX
GAL3ST4
STAG3
GPC2
OSGIN1
FGD3
TTYH2
RPL38
AMMECR1L
PFKFB3
RNF44
CDHR2
GPAT4
CLEC18B
BCAR1
POU3F3
MLPH
GOLGA6L2
PLK3
TCTEX1D4
BTBD19
TMCC2
TRMT2A
RANBP1
TAS2R41
DIP2C
CTDP1
TMEM132A
PTTG1IP
PLCB4
CLEC18A
FAM76A
OR2A4
CTAGE9
ZNF677
VN1R2
GPR37L1
MIDN
ATP5F1D
TMEM128
PAX6
CNN3
HPCAL1
ZNF763
RRBP1
UQCRC1
FRAT1
IL2RB
C1QTNF6
OR4F17
CDC14B
SNAPC3
TCF7L2
PHRF1
EFNB2
SDK1
CRYBA1
ABAT
DDX5
CEP95
CXXC4
MEGF9
CYB5A
POLG2
UBE2E3
IRAG1
ARL4C
CD24
SLC44A5
PCDHB6
OTOP1
AGRN
TP53
NHLH1
SSTR1
OR56A1
VSTM2L
ZMIZ1
IGSF9B
AHNAK
CYB561D1
ATXN7L2
DNAH1
SLC19A3
SPAAR
HRCT1
TP53AIP1
SLC43A2
TEPP
CNGB1
WBP2
KRTAP9-9
KRTAP9-3
UNC13D
KRTAP9-8
SFRP2
SHTN1
FBXL19
SLC3A2
NIN
DYRK1B
POLR3E
TIMM22
CRIP2
TRIM47
ZSCAN2
FAM102A
PLXNB1
SLC39A13
SOX6
GSN
FOXD1
SRSF7
ACVR1
ZSCAN9
PYDC5
IFI16
POLB
CEMIP2
KAT6A
TNFRSF11B
COLEC10
CREBZF
CDK2AP1
ST7
ADO
KRTAP1-4
C11orf91
PMPCB
IFI27
ARNT2
KRTAP1-5
PCDHA6
PCDHA5
CHD6
USP22
LOC647264
MYOG
BCL2L10
TMEFF1
GHRH
ZBTB7C
SOX8
LMF1
OR2T7
NELFCD
MAPK6
TEDC1
CRIP1
OR4F4
PIMREG
AIPL1
PCDHB12
FSCN1
ACSS1
TUBB2B
PCDHB10
PCDHB11
POTEM
NOTCH1
SLIT1
TMPRSS7
SENP8
MYO9A
NLGN1
OTUD7B
PTPRD
NSUN6
ARL5B
CCT7
TUBB
MDC1
TNFRSF6B
RSF1
AAMDC
TEX2
SRGAP2B
SRGAP2C
ASB1
EEF2K
TCF7L1
NFE2L1
PHLDA2
LRRC56
HRAS
ZCCHC24
FAM243B
FAM243A
POLDIP3
SYNCRIP
CELSR3
KMT5B
ZNF703
CDH18
FILIP1L
ID2
LMO4
GPC5
OR1F1
PDE4DIP
ELOA2
SCD
TMPRSS9
RBM38
LRRC24
C8orf82
KIAA2012
DST
SMARCA2
REST
CDX2
SOX2
TMPRSS11E
NAV2
NR5A2
DPPA5
TERF1
SMAD7
PLAGL1
ARHGEF38
CADPS
OTX2
ZNF483
METTL11B
ANKRD1
LRRC10B
MUC4
ID3
GAST
MTRNR2L8
CACHD1
DUSP6
ZBTB8OS
RBBP4
RPGRIP1
NRG1
ATP1A4
APOBEC3F
SPRED2
NTRK2
RMND5B
URM1
RIPK1
PIM2
GOLGA6D
CD99L2
FLVCR1
BDH1
MTRNR2L1
VENTX
UTF1
COL17A1
BCOR
TENT5B
LRRN3
FAM222B
TARS1
SOCS3
SERINC5
GIMAP5
FGF1
ZNF608
SHCBP1L
SPATA45
IFRD1
PPBP
PF4
SGK1
GDF11
PHC1
CD82
SSB
MFSD4B
SNRPN
ID1
PRICKLE1
CLDN9
OBI1
MTHFD1L
CLDN6
TDGF1
ZSWIM3
ACOT8
SAMHD1
RPH3A
SRRM4
BTG2
MOBP
SHC1
FAM174B
RNASE6
C9orf85
FLAD1
CKS1B
LRRC2
OR5AR1
EDDM3B
POU5F1
GAD2
SMCO1
SLTM
FBXW11
GRK6
ABHD17B
DMXL1
TALDO1
ETS1
DNMT3B
TNNI3K
SHISA5
PLPP2
NANOG
TREX1
SMPD1
UGT1A6
ZNF436
KLHL7
RNASET2
SCGB3A2
GLYATL1B
MED12
IL2RG
KRT31
ETV1
ABHD11
HESX1
HOXB1
KDR
RASGRF2
PMEPA1
CBFA2T2
HSCB
CHEK2
ZNF398
MRPL20
NADK
CELF3
PPP1R16A
ENSA
NFE2L3
FGD4
GBX2
GLRA1
RIIAD1
DDX43
FOXH1
KIF5C
HOPX
BCL2L1
VCAN
WFDC8
PSMD9
HPD
ITPRID1
ZNF343
RCN1
TRAPPC8
ETV4
GOLGA6B
GLI2
GAS1
NAA50
ATP6V1A
LDB2
NCDN
KIAA0319L
SALL4
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
FZR1
GNAI1
PPP1R16B
RPS24
BUB1
GNAI2
CER1
CELF4
IER5L
STON1-GTF2A1L
LHPP
GSX2
CYP1A1
TEKT3
TMEM70
DAGLB
USP44
ZNF18
SCN5A
ATP8A2
MYSM1
TRIM24
FIGNL2
CSAD
ADAM28
GPRC5B
PHF5A
ACO2
NRCAM
FZD8
LY96
ZNF740
SYBU
LCA5
LIN28B
FBP1
PRKG1
FOXP4
FGF2
MTRNR2L2
MSH3
DHFR
GOLGA6C
MFHAS1
PARP1
PALM2AKAP2
PTBP2
DDX46
ZCCHC3
C20orf96
ATF4
MKRN1
SNURF
GCNT2
TESK2
CYP2S1
IL34
TMEM63A
SLA2
RIF1
SOX5
PSMG3
PUF60
ZBTB40
FRAT2
FOXP1
ESRP1
TMCC1
APBA2
MCCC1
LEFTY1
CYTH2
KIFBP
CDC42EP3
RNF220
TRIP4
PCLAF
MRS2
SGMS2
PHLPP2
FOXA2
SAMD5
FBXO40
MMACHC
SGPP2
PRDM14
MIEF1
WDR55
DND1
ECE1
HOXD11
MACROH2A1
CRH
MDN1
PYGB
ZEB2
SLC35A5
DHDDS
ATG3
SALL3
TMEM41B
AMN1
SIPA1L2
RASA1
FZD2
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
CREB5
LRRTM3
SLC2A14
ZNF532
SPIC
NOTCH2NLC
ITGB3
SORBS2
ZFC3H1
THAP2
P2RY12
PRSS48
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
GJA1
MBNL2
SMAD3
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
CCT2
RFX4
LARP1B
MAD2L2
EOMES
SCAF4
TMC5
H3C15
H3C14
DNTT
ALDH1A2
SPRY4
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
DRAXIN
PRR15
THOC3
GABRB3
UNC13B
FOXB1
ST18
POSTN
BEND3
PDCL
MORF4L2
DPH6
DUSP29
DHX32
WBP1L
SOX14
OR5K3
SASH1
CEP41
DGLUCY
ECT2
CHFR
CPA2
COMMD7
PCBP1
TGIF2-RAB5IF
TGIF2
EBF2
SH3GL1
CHAF1A
NDUFS5
AASS
SH3BP4
BFSP1
FAM200B
ANAPC4
LIN28A
CTNNA1
MLEC
LRRTM2
KIAA0895
FAM180A
UQCRHL
SULT6B1
NRROS
KCNN2
TGIF1
TPH2
MTM1
ASXL3
CDYL
KNDC1
C1orf100
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
LRRTM4
MANBAL
SEMA6D
CA6
SEPTIN5
SIN3A
PSORS1C2
PIN4
L1TD1
VWCE
WDFY1
SMYD2
SRCIN1
WDFY2
EXT1
HMOX1