ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
ZNF483
OTX2
LRRN1
SPRED2
MUC4
GAST
SMAD7
BTG2
ZBTB8OS
RBBP4
MTHFD1L
TERF1
TMPRSS11E
ZSCAN2
MAMDC2
CD99L2
SOX6
TENT5B
CRH
NRG1
PIM2
DMXL1
ECE1
REST
SFRP2
SNRPN
SNURF
FLVCR1
SPATA45
ID3
RPS24
HOXB1
CACHD1
CRYGB
LMCD1
MRPL20
BCOR
TCF7L1
MOBP
IFT80
LRRC10B
RNASE6
EDDM3B
DCAF4L1
SLC30A9
ZNF18
MORF4L2
OR5AR1
COL17A1
SHCBP1L
C9orf85
ABHD17B
SLA2
FAM174B
CDX2
RMND5B
FGF1
PHC1
ABO
LIN28B
PSIP1
DNMT3B
RNASET2
WDR55
DND1
DPPA5
METTL11B
TNNI3K
ZNF398
TRAPPC8
NBPF15
APOBEC3F
ZYG11A
NTRK2
WFDC8
ZBTB40
ZNF343
ZSWIM3
ACOT8
LRRN3
CELF4
ARHGEF38
ZNF608
BICD1
MKRN1
SALL4
PYGB
HOPX
SAMHD1
SLTM
TMEM43
CHCHD4
SSB
EOMES
TIMP4
MED12
IL2RG
PRICKLE1
GIMAP5
SHC1
FLAD1
CKS1B
TRIM2
ANKRD1
FOXP4
HESX1
SH3GL1
CHAF1A
LHFPL4
SEC14L5
FBXW11
GPR85
HSCB
CHEK2
FGD4
BDH1
SLC35A5
ATG3
LEFTY2
ITPRID1
FBP1
VENTX
UTF1
DOK7
TEKT3
SGK1
GSX2
LONRF3
IL34
NES
RCN1
MTRNR2L8
ETV1
GDF3
CSF2RB
GAD2
GPR31
FZR1
GDF11
PUF60
NRBP2
CPA2
RPH3A
ID1
GNAI1
YIPF4
NLRC4
UHRF1BP1L
PPEF2
MFSD4B
OR6A2
TET3
KLHL3
DIDO1
GID8
GALNT18
FGFR2
GLI2
PEAK1
HMG20A
ATP1A4
CADPS
OR5K3
FAM222B
HBG2
HBG1
SMC6
GEN1
LARP1B
AK4
KLHL7
RIPK1
ENSA
NANOG
TDGF1
LRRC2
SEMA6D
HOXD11
HOXD13
HOXD12
SMPD1
PARP1
JPT1
PTBP2
SCAF4
EXT1
AMN1
CAPN3
ANAPC4
NXPH1
DDX11
GLYATL1B
SERINC5
CCBE1
ARAP3
IFNE
FEZF2
NACAD
NCDN
KIAA0319L
FSTL4
PTDSS2
SMPDL3B
ATXN3
NDUFAB1
DUSP6
KDR
RASGRF2
FZD2
NPSR1
DRD1
SHISA5
TREX1
SLC46A1
DACT1
SOCS5
ABCB5
PAK1
NEPRO
C1orf127
PSMG3
TRIM16L
TRIM56
RAX
REV3L
CRTAM
SNX19
ACOXL
KLF17
VCAN
SACS
CLDN14
L1TD1
GLRA1
FIGNL2
TRPM1
PSMD9
HPD
TUBB2A
SGPP2
ANP32A
PLSCR4
ZFHX3
FOXD3
TARS1
OR4X1
SPIC
C10orf95
MFSD13A
INO80D
SLC66A2
HSBP1L1
IRAK1BP1
IL13RA1
PLEKHA5
MBNL2
TMC5
ZNF674
KLRB1
NDUFV1
ISOC2
PREX2
TAS2R46
TPH2
BOD1L1
FRAT2
GLDC
CAAP1
IGBP1
RAB40AL
MAD2L2
DRAXIN
PNRC1
RESF1
CA6
WDHD1
SOCS4
ZNF565
PPBP
PF4
APOBEC3G
PPP1R16B
LYPD6B
UGP2
BEND3
C22orf39
RAD18
WDR44
NFE2L3
FAM20A
KRT6B
FXYD6-FXYD2
FXYD6
PTH1R
TRMT10C
NR5A2
MLEC
DGAT2L6
TMEM98
SYT2
SLC23A2
ZNF875
PCDHGC5
PCDHGC4
PCDHGC3
PPP1R16A
FOXH1
CSAD
ZNF740
PSEN2
POU5F1
PTAR1
PITPNM2
ITGB5
CLDN9
CLDN6
ATP8A2
GOLGA6D
SOX14
SYN3
TCHP
CD82
KCNJ1
TRIML2
DET1
SLC36A2
FAM131B
H3C15
H3C14
H2AC19
H2AC18
PCDHB5
TRIT1
GABBR1
PCDHB4
NATD1
ZNF770
NMNAT2
ZNF552
AGO1
GOLGA6C
ZNF781
MAGEA10-MAGEA5
MAGEA10
TRIM24
CDC14B
NLRP12
TBC1D16
SCGB3A2
GCNT2
ZFP3
AASS
RMND1
ARMT1
PIPOX
FXYD5
FXYD7
SOX4
NAV2
GCSAM
GYG1
MYSM1
GABRB3
DHX32
TESK1
TALDO1
NECTIN1
C5orf63
METTL7A
GXYLT2
LEKR1
MT1HL1
ANXA2
PDCL
SP7
GABRQ
CERCAM
KIF21A
CDX4
GPRC5B
PRODH
LOC102724788
CNGA1
NIPAL1
GSN
NRG2
FZD8
VANGL1
SNX16
GJA1
KRTAP3-2
KRTAP3-1
ITGB3
ABCA13
ZNF296
GEMIN7
SMIM32
CFAP410
PRKG1
IRF3
BCL2L12
ZNF436
CER1
SASH1
MAP6
PPP2R5A
GTF2I
MAGEB2
MT1X
MT1H
MT1G
ATG10
FAM180A
KRBA2
PPP2R3A
RGSL1
TRPC4AP
ASH2L
CDYL
MFHAS1
C1orf100
ADAMTS1
CCN3
ZEB2
MRS2
PCBP1
BLCAP
TMEM70
LY96
ATP8B4
SRCIN1
PPP1R18
NRM
CEBPZ
LDB2
KIAA0895
ZNF600
PALM2AKAP2
SENP2
ACCS
REXO4
ADAMTS13
RIN1
FUS
SLC38A9
ZNF438
TNK2
SOX21
PPP1R15A
BIRC6
MTM1
CST1
GOLGA6A
KNDC1
CHFR
RNASE9
SCN5A
MDN1
ARSL
ESRP1
PLA2R1
RHBDD2
NHLH1
ELOVL6
SOX2
DDX43
RASA1
ANKRD40
PCDHB16
PCDHB9
PCDHB8
PCDHB7
LUC7L3
MSX2
CEP135
OLFML3
MBOAT2
OR13A1
MOV10
LHPP
ALDH1A2
LRAT
SLAMF1
PDGFA
SELPLG
SEPTIN5
KIAA1522
UBXN10
PLA2G2C
USP44
PRRC2B
SMIM14
OCM
RNF186
NADK
CNR2
OLFM2
SMAGP
UQCRHL
FAM98A
ZDHHC14
KNG1
RBM22
HAND1
SAMD5
P2RY12
YAF2
RNF19B
B3GALT5
FBXL14
EPAS1
NEB
GBX2
SEC22B
MAD1L1
ZP2
DDX46
TRABD2B
KCNIP4
HELLS
MUC1
EBF2
FGF12
TNRC6A
KMT5C
COX6B2
DPPA4
MEIS2
FGD3
TMPO
TIAM1
AGK
TRIP4
PCLAF
SLC34A1
PFN3
BCAT1
ARHGAP36
GSPT2
RIF1
TMEM170A
DNMBP
PGPEP1
CMAS
POMZP3
EIF4A2
MAGEA11
DNAJB1
TECR
AGL
IQCF2
URM1
SOCS3
SMYD2
RAB15
FNTB
GUCY2F
CCL2
CCDC33
CCL26
NAA30
PRDM14
ARHGAP22
CECR2
MYF6
MYF5
NDST1
FGF6
ST3GAL6
GPR179
CCDC9
ESX1
ANK2
AIRE
NEUROG1
DCLK1
FOCAD
OBI1
LINGO1
KCNMB4
ELMO3
UNC119
PHETA2
NAGA
CYP2S1
SCARB1
MPP2
DDX39A
PKN1
USP7
URGCP
URGCP-MRPS24
NKIRAS2
DNAJC7
CCDC149
PRR7
POU2F3
S100A11
GUCY2C
NFKB2
ASXL3
B4GALNT2
ZNF200
UBR2
SOAT1
FGF4
BEND7
CCDC169-SOHLH2
CCDC169
HNRNPA3
LYPD1
KRTAP5-9
KRTAP5-8
DENR
FAM200B
HHIP
CSGALNACT1
TBC1D23
COPZ1
PALLD
CDC42EP4
MBNL3
RAPGEF1
UGT1A6
UGT1A7
DSP
STON1-GTF2A1L
UNC13B
PCDHB12
PCDHB14
PCDHB13
ABL2
TNFSF8
TPCN2
STX16
SLC25A12
RAD54L2
BEST3
VIM
UPF1
CRYBB1
SESTD1
GDF7
MUC3A
OAT
CCDC13
FYN
TFAP2B
UTS2R
PLAGL1
ETV4
MOG
PTPRN
TMEM167B
GPC4
CSF3
TRIB2
BRWD3
FBXO40
NUAK1
ENKUR
OR2A42
BCL2L1
HSPG2
ALPL
SYNPO2
BICRA
CYP4A22
LOC102723623
GOLGA6L22
GOLGA6L1
GMCL2
CDH26
CKAP4
FHL1
C1orf105
ZNF335
ROR1
RBP3
MTF2
KRT8
PLAAT4
NBPF19
NBPF26
NBPF14
FOXA2
ARID3B
SAV1
DNTT
GSTT2B
SLN
EFNB2
HDAC9
BLOC1S2
GPR149
UBAP2
HRH2
KAT8
PRR14L
DEPDC5
IFIT3
SERPINA1
ERVH48-1
IL22RA2
VOPP1
SMN2
SMN1
AEBP2
MRPS25
PCGF6
ZNF664-RFLNA
ZNF664
CCDC92
JARID2
PPAT
OCSTAMP
TMEM47
PRPF39
PCDH1
CLIP2
MCCC1
DUSP12
BTBD10
RIMBP2
PCSK1N
ERAS
SIN3A
TBC1D1
CCNT1
TEX49
MDFIC
KANSL1L
LBP
SYBU
DNAJC3
PEX12
AP2B1
GLIPR2
ZNF814
OR6C3
BARD1
CHIC1
PBDC1
KCTD7
RYR2
GRIA3
DUSP29
LRRTM4
PXDC1
ZNF318
BRDT
MACROH2A1
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
GIGYF1
ACSBG2
TESK2
MMACHC
TMPRSS11F
GOLGA6B
SFT2D3
CCDC130
POSTN
LIN28A
OR2AT4
MLN
KCNN2
PACSIN2
CAPZA2
SPTY2D1
ZDHHC1
ZNF532
FZD5
MIDEAS
SVOPL
GPR19
PDE1B
ERICH2
GRM4
PKIG
SERINC3
SLC30A3
TRIM54
DNAJC5G
WBP1L
SLFN12
LRGUK
HAUS5
KHDRBS1
DHRS3
SPRY2
AQP2
SPRY4
MVB12A
BST2
LRRC47
ABCC2
IL1A
TRIM71
PGAP6
SUPT7L
SLC4A1AP
WDR49
PARN
BFAR
ARID5A
RIPOR3
TTLL4
SGMS2
SLC25A16
TCEAL3
ZNF34
ZNF517
RPL8
ASIP
FGF13
RAC3
DCXR
PCNX2
USP32
SLC66A3
PTF1A
ALDH2
PRMT2
CSHL1
PARM1
SLC35F6
ZNF391
SERPINB8
LIPK
TSGA10IP
LHFPL5
CLPS
SERPINB6
C1QA
KDM2B
NKX1-2
DEFB107B
DEFB107A
RNASE10
IL17RD
EPHB3
SPHK1
RIC8B
PRUNE2
SURF6
KLHL4
AADACL3
TRIM52
SCAP
TMEM63A
LEFTY1
ATP6V1G1
FMNL3
KCNMB2
FAM189A2
OR5H1
OR5H14
TSACC
CCT3
LHX2
MSTO1
NLGN1
DACH2
ARRB2
ABCA4
LANCL3
CFLAR
RNF213
SLC5A9
TRIM64B
KLF3
SMAD3
RNF43
DYNLL2
CAVIN3
TMEM266
F11
TMEM220
TBC1D30
PHF8
GRIP2
BUB1
ICMT
HES3
MARK2
FRS2
SULT4A1
SLC39A8
KCNF1
TCP11L1
FAM193B
GPR150
ZNRF1
KMT2B
ZIC2
ZIC5
LOC100996842
MPDU1
SOX15
MECOM
TP53
WRAP53
RPS10-NUDT3
RPS10
CCM2
HES5
PANK4
KAZN
MRGPRE
ADGRD1
ECHDC1
UBQLN4
RAB25
LAMTOR2
GAS1
WDFY1
FAM153B
DLST
NUP93
MYOM1
ZBTB45
VSIG10
AKAP1
PHLPP2
NCALD
PRSS41
CYP1B1
SLC9A4
PTPRB
GPM6B
LPCAT4
NFIX
CCDC54
SLC10A6
PRAMEF33
PRAMEF10
ARL15
CAPN13
DGKZ
RPL21
GPR160
FAM89A
OVCH1
TGM7
ZNF202
SLC1A3
C16orf78
TRIM14
ST18
EPB41L1
CDC25A
PRORP
PPP2R3C
CACNA2D1
DTX2
DOCK1
PLA2G2A
THEM5
GADD45G
ATF4
MIEF1
LRFN5
SRSF4
SMCHD1
CDC42EP3
COMMD7
MPZ
SDHC
GRAMD2B
ZCCHC3
C20orf96
CHRNA9
GCLC
LRRC59
MRTFA
POC5
SOX5
TCP1
MRPL18
PNLDC1
PMEPA1
NDUFA4L2
STAC3
PROCR
RBFOX2
MT1E
MOB1A
MINAR1
PHTF1
NAXD
HLA-F
IGFBP1
OR2B3
OR2J1
MID1
SPIN1