ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101129 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◣ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
MAMDC2
DPPA5
ZNF483
GDF11
RIPK1
TMPRSS11E
SOX6
ZNF343
TRIP4
PCLAF
ATF4
MIEF1
ID1
REST
SGK1
SPIC
TNS3
LRRC10B
UGT1A6
UGT1A7
TERF1
RIF1
MED12
IL2RG
PIM2
JPT1
ARHGEF38
ZBTB8OS
RBBP4
OBI1
ZYG11A
NRG1
PDSS2
CLPB
ESR2
FBXW11
FAM222B
CMIP
WDR55
DND1
CELF4
CD99L2
NCDN
KIAA0319L
FAM200B
MTF2
KLF5
UBAP2
MKRN1
SOAT1
SYBU
SLC35A5
ATG3
RNASET2
TARS1
CMTM4
MSL2
SMPD1
ITGB3
ZSWIM3
ACOT8
SLC37A4
CCR8
CYP4A22
RMND5B
NADK
TNFSF8
NRROS
MFSD4B
ZBTB18
SPTLC2
ATXN3
PUF60
NRBP2
EIF1B
TIAM2
DDX43
KDR
RPS24
MYSM1
TCP1
MRPL18
PNLDC1
PPEF2
BIN2
TUBB4A
SLA2
MRPL20
CCN3
ZNF34
ZNF517
RPL8
CFLAR
NDUFV1
OTX2
CCDC9
PRICKLE1
PROM1
AIRE
APOBEC3F
TACSTD2
SAMHD1
ANKRD1
SLC23A2
BTG2
SSU72
ETS1
AGO1
SMAD7
TMPO
SLC25A29
TRIM2
VENTX
UTF1
DMXL1
PYGB
NES
C10orf95
MFSD13A
EVA1B
TBCD
FN3K
FLVCR1
SPATA45
KLHL3
STAG2
PSMG3
OAT
TALDO1
NDUFAB1
PCLO
SEC22B
NBPF19
NBPF26
NBPF14
CCDC130
DUSP12
VSIG10
MSTO1
SLC16A10
ZNF696
ABCC10
MAGEA10-MAGEA5
MAGEA10
APELA
IER5L
ZFP3
NVL
LDB2
SMC6
GEN1
MRS2
RPS28
NDUFA7
CD320
OR4X1
ASRGL1
KIF21A
PALM2AKAP2
MBOAT2
TEKT3
PRODH
LOC102724788
MFHAS1
CPA2
LDAH
RBM8A
CNR2
PRPF39
MUC4
SHC1
FLAD1
CKS1B
ENSA
HSCB
CHEK2
SEPHS2
ABL2
SCHIP1
MT1E
LARP1B
WDHD1
SOCS4
HOMEZ
PPP1R3E
GSN
MBNL2
NANOGNB
CLEC4C
PRDM14
ZNF552
FAM20A
ABO
SNAPC3
C7orf50
GLYATL1B
SIN3A
ATG9B
ABCB8
IRAK1BP1
SRSF12
ST3GAL6
ZNF398
APOBEC3G
SALL4
GLDC
BICD1
SCGB1D1
ANAPC4
SNX19
PARN
BFAR
CRYGB
ATAD3B
MTHFD1L
HOXD11
HOXD13
HOXD12
ARRDC2
RASGRF2
FGD4
SPTY2D1
CREB3L1
DDX46
BDH1
YIPF4
NLRC4
PMEPA1
LRRTM4
UPP1
BLOC1S2
PARP1
CD9
GABRQ
ZMAT3
HAUS5
ZDHHC9
SNRPN
NLRP7
UNC13B
DET1
CARS1
FLVCR2
GINS3
TFAP2C
SOX5
TESK2
MMACHC
TDGF1
LRRC2
PDCL
DOCK1
DDX39A
PKN1
GARS1
MRPL22
GEMIN5
ZNF318
NCBP3
MOG
PTAR1
A2ML1
FAN1
MCHR1
MORC1
CCDC169-SOHLH2
CCDC169
GRAMD1C
PTPRN
TULP2
NUCB1
ZNF875
PDCD7
RPUSD3
TMC5
FRAT2
PATE3
SOX21
ZP2
RCN1
TRPV3
LARP1
SH2D4B
TENT5B
TRAPPC8
SGPP2
GOLGA7B
ZFP64
SHCBP1L
ZCCHC4
ZNF729
SFRP2
RASA1
ZNF565
PTBP2
PLEKHB2
NEPRO
DEFB132
CSAD
ZNF740
RMND1
ARMT1
FAM227A
CBY1
PTPN12
DERA
NPAS1
BCOR
AGL
CGN
TMEM70
LY96
SLC35F6
KRBA2
METTL2B
COL17A1
SEPTIN5
ZNF469
HLA-F
GTDC1
CCDC200
MPZ
SDHC
S100A2
GNAI2
RASSF8
PRKAA1
ARHGAP19
ID3
SLC2A11
TET3
TMEM229B
KRT82
KDM2B
PEX12
AP2B1
SNTG1
CACNA2D1
MLN
OR6C70
TTC13
ARV1
ITGB5
PHC1
CEBPZ
GAST
PSORS1C2
HARBI1
ATG13
CCDC57
ATG5
PRRC2B
FUS
GALNT8
OR6C3
SLCO4C1
REEP6
PCSK4
SSB
SOX2
LHFPL5
CLPS
FAM219A
DNAI1
ZNF100
DUX4
NCBP2AS2
NCBP2
IGF2BP2
C10orf99
ZSCAN10
TPCN2
WDR33
SESTD1
ZNF562
ZNF532
SPATA13
MRGPRX3
SLC66A2
HSBP1L1
CATIP
REM1
DEFB124
DENR
DDX23
PMS2
AIMP2
IFRD1
ASH2L
SYN3
HUS1
DTD1
HOXB1
ZNF335
MORF4L2
MGLL
RNASE10
UTS2R
SLC25A16
NPSR1
NBPF15
CNGA1
NIPAL1
SLC35G4
ZNF460
NFKB2
CNOT11
HSF2
WDR25
WARS1
PRPS1
SLC7A7
MRPL52
APOC1
OR1E3
TMEM41B
KIFBP
DLX6
BASP1
SMIM31
TRIM5
TRIM22
FCHO1
PGAM1
NTAQ1
OR2H2
DNTT
PEAK1
HMG20A
PITPNM2
TTLL1
RAB42
CEP44
SNX16
BRDT
C9orf85
ABHD17B
CTHRC1
RTP3
RBM22
HCAR3
HCAR2
MUC21
MBD4
IFT122
NBPF12
C1R
FUBP1
DNAJB4
RPP14
HTD2
ORAI1
SYTL4
SLTM
FAM107A
ABCA13
LRFN5
UAP1L1
SAPCD2
AKAP7
LRTM2
AASS
VANGL2
TP53
WRAP53
TBL1XR1
LRPAP1
TSPAN16
SMYD3
SNX4
FZD8
RBPMS
ANGEL1
LRRC74A
RNF135
LIPK
INTS9
HMBOX1
GJA10
MRPS25
PLS3
MROH7
OR8S1
AKAP12
TRIML2
LIMCH1
SOX4
CCDC85A
ZNF385B
EXT1
SLC3A2
OR6S1
FOXP1
IL1A
VIT
FBXO40
P2RX4
B4GALNT2
PIAS4
DCAF4L1
SLC30A9
STMN2
ACADS
SLC6A8
PNCK
SLC25A12
CBX1
CHRM2
C19orf25
IGFL4
GIMAP5
CSF3
OR6J1
ZC3HAV1
DUSP29
GALNT18
ZNF90
MVB12A
BST2
GNPTAB
NECTIN4
AKIRIN2
ZNF106
SNAP23
FGFR3
DEFB107B
DEFB107A
PINK1
TMEM202
SLC35G5
RPGRIP1
F7
IL34
FIGLA
ALDH1A2
ZNF695
MYRFL
WDR74
STX5
ZCCHC3
C20orf96
ZNF665
TXNDC15
RAB15
YAF2
GUCA1A
FNTB
ZNF649
GRAP2
RAB3GAP1
SEC23B
PIGZ
TBC1D22A
LEFTY2
S100A16
ATMIN
ZNF75D
ETDC
LIMS1
BARD1
SRP14
URM1
IQCF2
DVL2
DLG4
ACADVL
SRRM4
CRH
DISP3
SLC17A5
PAAF1
RPL11
INO80D
KRT8
F11
TRIM56
GJA1
TOMM40
FANCA
SPAG5
RNF212B
PEX5
CADPS
PRDX3
GLIPR2
GCNT2
SLC38A9
DUSP16
CCDC91
NOTCH1
SALL3
BOD1L1
ADAR
LRRC47
ZNF43
CCDC149
SPRY2
NR5A2
SHISA5
TREX1
FOXP4
ST18
SEMA6D
CELF3
RIIAD1
CEP85L
RNF19B
THOC2
GCNT1
IHH
LRRN3
RPTOR
COL26A1
CLDN9
CLDN6
L1TD1
TBC1D1
SFTPB
EHD4
RFC4
BUB1
PLAAT4
RPL24
PNMA1
RIMKLB
FGF4
ELP6
PHETA2
NAGA
IGFBP1
SCUBE2
FXYD5
FXYD7
DSP
ZMAT2
SMAGP
HLA-A
TAF13
PRORP
PPP2R3C
DNMBP
EOMES
OR6A2
CHMP7
GP5
PLSCR4
VCX3A
HOPX
CXADR
VTA1
NMBR
KHDC1L
SNX3
ADA2
FAM98A
CCL24
CTSC
PLTP
SLC2A14
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
LINGO1
MACROH2A1
ATG10
AHCYL2
TUBB2A
DAGLB
SKA3
MRPL57
PLLP
PRKAR1A
RBP3
RNF225
ZNF584
FEZ2
OR5AR1
ZNF675
SET
GOLGA6D
CREBZF
PIN4
AK4
F2RL1
FXN
HDAC9
LBP
RANGAP1
ZC3H7B
CRACDL
KLRB1
GAD2
FAM193B
LGR6
CCAR2
C8orf58
FOXJ2
STX18
NAA30
GDF3
DUSP6
HLA-DRB5
MARS2
LCA5
TRIM24
RPS3
FOXN3
ZC3H12B
SPATA4
NAA50
ATP6V1A
RTN4
BRWD3
CDYL
GEMIN6
TRIM52
MAML3
TSACC
CCT3
ACOT6
ZFP42
TULP4
MS4A12
GATA6
KCNF1
AHCY
FAM83F
MPI
GML
FAM174B
E4F1
PRAMEF33
PRAMEF10
PGP
BRICD5
ZNF486
MYO5C
KIF16B
NCOA7
ZNF608
FZD5
AIP
TMEM134
CYP1A1
FASTKD1
PPIG
APOBEC3D
APOBEC3C
CAAP1
ALPL
FAM169A
GCSAM
SDCBP
HILPDA
MAP3K19
NEB
NMUR1
HS3ST2
PPP1R3B
SLC35G3
ZC3H11A
ZBED6
MED15
HNRNPA3
STMN1
ATP9B
MT2A
IGFALS
MT3
ZMIZ2
CLDN4
METTL27
HOXB2
RUNDC1
PTGES3L-AARSD1
PTGES3L
AARSD1
CSPP1
BCL9L
ZER1
TBC1D13
VASH1
CTNNA3
CCDC60
STRA6
TBC1D14
KCTD7
ZNF281
OR5M8
GALK2
LYPD6B
TACC2
ARHGAP42
INSM1
PGBD2
PSRC1
MRPL17
PRR15
ZNF680
NFE2L3
CAPN3
ARID3B
SLFN12
PRDX4
PGM2
IFT80
C2
GTF2A1L
TSPAN13
ADCK1
SYT2
CR1L
CCNT1
TEX49
IGSF23
ATF7IP
SULT1B1
MARCHF8
OPN5
ACYP2
PSME4
P2RY12
SPIN1
MAPRE3
AMBRA1
ACBD7
DPPA2
PHKB
ITFG1
CACHD1
RBBP9
AMOTL2
DLL3
LRRC19
PTH1R
BCKDK
METTL2A
UGP2
SPATC1
OR13A1
MX2
MPP2
OLFML2A
NR6A1
RPGRIP1L
FTO
GNAL
CHMP1B
INO80C
C22orf39
CCL2
ETV4
ZNF28
FAM227B
ARHGAP28
DTWD1
DPH6
MESP2
XBP1
OR8J3
FCGBP
SNURF
ITPKB
ZNF138
EMC8
COX4I1
ETV1
FGFR2
PRKAG2
SEC63
LDLRAD1
ADCY6
BEND3
PXDC1
SERPINB6
LPCAT4
USP1
CASP8
MIF
GBX2
CEP41
TRIM13
PNKD
DUSP8
DEFB108B
NLRP12
FOXI3
SUCLA2
ZNF600
CHI3L2
PRR13
RPS6KA2
SPATA6
ATP6V0A1
VN1R4
CRELD1
ATP6V1G1
EML2
SRPK2
PRSS41
KANSL1L
ZNF664-RFLNA
ZNF664
CCDC92
KNG1
FXYD6-FXYD2
FXYD6
SSH1
ZSCAN2
GMCL2
GAS6
ATP6AP2
POLD1
PCYOX1
SLC35E4
OPA3
HES2
ESPN
DDX3X
TSKS
AP2A1
TMEM150C
SELENOV
DYNLL2
RWDD2B
PRAMEF17
TRIM60
RPS7
GAS1
ZNF18
MAD2L2
DRAXIN
ARL4D
FERMT1
OR8B3
TMEM247
SGMS2
SRCIN1
EMSY
CERCAM
CAPN2
COX8C
UNC79
BTBD7
MOB2
FZR1
AUH
RMDN2
ARL8B
CRYZL2P-SEC16B
KLF7
CCM2
ZNF534
TMEM170A
PUS1
CLPP
CLEC9A
ZNF566
FOXE1
TRAF3
TFAP4
PHB2
ZNF624
GPR1
GSAP
UQCRHL
PI16
METTL16
ANKDD1B
H3C13
H2BC18
HYOU1
VPS11
TGIF2-RAB5IF
TGIF2
SUMO3
AASDH
CLEC2L
RPRD1A
REEP1
RUNX1T1
CA13
YWHAE
SARS1
PRTG
RUBCN
OMP
MRFAP1L1
BLOC1S4
APAF1
PNISR
PHF11
TAGLN3
SPATA22
ASPA
FBP1
KMT5C
IFITM1