ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
MTHFD1L
MUC4
ZNF483
NRG1
CD99L2
TERF1
REST
OTX2
LRRN1
MAMDC2
GAST
COL17A1
TMPRSS11E
TENT5B
HOXB1
FLVCR1
SPATA45
ZSCAN2
BTG2
SMAD7
ECE1
MOBP
SHC1
FLAD1
CKS1B
SAMHD1
SPRED2
PIM2
SFRP2
SLA2
SOX6
ZBTB8OS
RBBP4
LRRC10B
TCF7L1
APOBEC3F
CRH
OR5AR1
ID1
RPS24
RMND5B
TIMP4
ID3
MORF4L2
GPR85
FAM222B
DPPA5
SSB
ZNF343
ZYG11A
FGF1
SGK1
SNRPN
SHISA5
TREX1
ARHGEF38
CACHD1
ZSWIM3
ACOT8
METTL11B
SHCBP1L
ABO
TRAPPC8
DMXL1
CRYGB
CELF4
RIPK1
RNASE6
EDDM3B
DNMT3B
DCAF4L1
SLC30A9
ZNF398
HOXD11
HOXD13
HOXD12
GDF11
NES
PEAK1
HMG20A
BDH1
IFT80
IL34
BCOR
GPR31
ACOXL
VENTX
UTF1
OR6A2
SH3GL1
CHAF1A
PHC1
GSX2
RCN1
ATP8A2
MED12
IL2RG
FBP1
HSCB
CHEK2
PARP1
GDF3
PIPOX
WFDC8
GAD2
HESX1
TNNI3K
RASGRF2
SLTM
CAPN3
SALL4
LMCD1
TDGF1
LRRC2
MRPL20
RNASET2
SMPD1
DUSP6
TRIM56
TEKT3
KLHL3
TRIM2
C9orf85
ABHD17B
BICD1
SACS
NTRK2
GIMAP5
ANKRD1
NCDN
KIAA0319L
PLSCR4
LDB2
LEFTY2
LIN28B
PUF60
NRBP2
HOPX
CDX2
ATP1A4
DDX11
FBXW11
FAM20A
ZNF608
MKRN1
LARP1B
NBPF15
FAM174B
PPEF2
PSEN2
PRICKLE1
MFHAS1
LHFPL4
FZR1
MYSM1
CDYL
WDR55
DND1
SMAGP
LRRN3
RPH3A
AMN1
UHRF1BP1L
DACT1
VCAN
SEC14L5
PSMD9
HPD
ZNF18
SMC6
GEN1
DRD1
SYT2
C22orf39
TPH2
ANAPC4
SNURF
MAGEB2
ZNF875
EOMES
TALDO1
KRT6B
PTBP2
SLC23A2
MFSD4B
IL13RA1
GLDC
CPA2
TMEM43
CHCHD4
ETV1
SLC35A5
ATG3
GOLGA6D
FOXP4
ITPRID1
FGD4
TARS1
ABCB5
NDUFV1
RBM22
ENSA
ESRP1
PCDHB5
PCDHB4
MTRNR2L8
CLDN9
CLDN6
NANOG
SYN3
ARAP3
EXT1
ZFHX3
L1TD1
TRIM24
FZD8
CA6
IRAK1BP1
ISOC2
MAD2L2
DRAXIN
PYGB
PNRC1
HBG2
HBG1
ZBTB40
TRIML2
HAND1
AK4
TRIT1
OR4X1
FXYD5
FXYD7
DET1
TET3
FAM98A
ZNF296
GEMIN7
UGT1A6
FBXO40
UGT1A7
CNGA1
NIPAL1
SOCS5
BOD1L1
SLC36A2
NPSR1
ZNF674
CDC42EP4
PPP1R16A
GLRA1
FOXH1
USP44
GALNT18
MBNL2
SELPLG
GSN
LIN28A
GLYATL1B
NATD1
FRAT2
ITGB3
DOK7
ANXA2
CSAD
ZNF740
FSTL4
PRDM14
C10orf95
MFSD13A
JPT1
PCDHB16
PCDHB9
PCDHB8
PCDHB7
C1orf127
FZD2
PCDHGC5
PCDHGC4
PCDHGC3
TUBB2A
TRPC4AP
PDGFA
RAD18
TNK2
PITPNM2
TCP1
MRPL18
PNLDC1
CADPS
MLEC
NXPH1
LEKR1
SLAMF1
KIF21A
NEPRO
ALDH1A2
AGO1
NECTIN1
STX16
ZNF552
CEBPZ
ATP8B4
RIN1
SOX21
P2RY12
ASIP
DNMBP
KLHL7
FGFR2
ALDH2
SNX16
RASA1
RESF1
DPPA4
SMIM32
REV3L
ESX1
ZNF770
SMPDL3B
TRPM1
WDHD1
SOCS4
PTH1R
SMYD2
PSIP1
SERINC5
NDUFAB1
URGCP
URGCP-MRPS24
GOLGA6A
FEZF2
AGK
KLRB1
TRIP4
PCLAF
MTM1
BIRC6
PREX2
SOX4
ZNF318
ASH2L
ELMO3
CDC14B
SNX19
IGBP1
DDX46
TMEM98
NFE2L3
EPHA4
ATXN3
MDN1
INO80D
DNAJB1
TMEM167B
PTAR1
TMEM47
TCHP
PRODH
LOC102724788
LONRF3
FGD3
SYBU
TMEM170A
MAGEA11
ZNF565
TRMT10C
MOG
SLC66A2
HSBP1L1
IFNE
PCBP1
ZP2
ZNF436
LIPK
TNFSF8
KCNMB4
PAK1
NDST1
BRWD3
TAS2R46
PRKG1
MAGEA10-MAGEA5
MAGEA10
NACAD
IL1A
ZDHHC14
NRG2
UGP2
TMPO
SENP2
SEC22B
TBC1D16
CCDC149
KDR
NAV2
CST1
SALL3
SEPTIN5
APOBEC3G
YIPF4
NLRC4
IER5L
CCBE1
SRCIN1
DIDO1
GID8
GCNT2
RHBDD2
RNF186
GPRC5B
ANKRD40
LUC7L3
CCN3
OBI1
SEMA6D
S100A11
BTBD10
CSF2RB
PPP1R16B
PPP2R5A
CLDN14
TRABD2B
PCDHB12
PCDHB14
PCDHB13
GIGYF1
GOLGA6B
ACCS
KCNMB2
SOX14
HDAC9
GOLGA6C
SGPP2
PTPRN
FGF4
LYPD6B
SPIC
GLI2
GXYLT2
OLFML3
AEBP2
UNC13B
GABBR1
OR5K3
SLC25A16
DSP
DDX39A
PKN1
PLEKHA5
CCDC13
PTDSS2
GTF2I
SP7
KCNIP4
KNG1
TCP11L1
UQCRHL
WDR44
PPP2R3A
TMEM70
LY96
KRBA2
EPAS1
MACROH2A1
UNC119
FIGNL2
PHTF1
UBXN10
PLA2G2C
BCL2L1
CDX4
BCAT1
MEIS2
YAF2
CRTAM
PRR7
FOXA2
OLFM2
PALM2AKAP2
KRT8
DGAT2L6
CNR2
CMAS
SCAP
USP7
GNAI1
LRRC47
ITGB5
CD82
PPP1R15A
PGPEP1
MBOAT2
MAP6
BEND3
DLST
SLC38A9
RNF19B
NMNAT2
PSMG3
GUCY2F
VANGL1
PCDH19
KIAA1522
FOXD3
CYP4A22
B3GALT5
GBX2
HNRNPA3
MBNL3
ANP32A
SAMD5
ZNF90
NHLH1
ICMT
HES3
LRRTM4
HECW1
NLRP12
NADK
DDX43
LRAT
MPP2
PRUNE2
CSHL1
ZNF335
PHF8
ATG10
MRS2
METTL7A
TMC5
CHFR
LHPP
SLC34A1
PFN3
RMND1
ARMT1
NKX1-2
PLAGL1
MCCC1
CCDC169-SOHLH2
CCDC169
AIRE
MT1HL1
MRPS21
ZNF814
CAAP1
SYNPO2
GPR150
ZNF781
JARID2
PDCL
SGMS1
CCDC130
SPHK1
ZFYVE1
PHLPP2
H3C15
H3C14
H2AC19
H2AC18
PHETA2
NAGA
FGF6
NCR3
ZAP70
REXO4
ADAMTS13
ABCC2
PDE1B
OR13A1
AADACL3
NBPF12
ADAMTS1
FOCAD
KLHL4
SIN3A
IFIT3
IRF3
BCL2L12
MUC1
PALLD
EFNB2
PPBP
PF4
VIM
SASH1
AUH
MLN
GSPT2
GJA1
CDC42EP3
PRR15
NR5A2
LINGO1
ZEB2
RAX
CSGALNACT1
STON1-GTF2A1L
DHX32
ZFP3
TTLL4
KCNJ1
SAV1
AQP2
KRTAP5-9
KRTAP5-8
TMEM9B
HELLS
PTPRB
LYPD1
GYG1
ATF4
MIEF1
TIAM1
SULT6B1
SLC20A2
PLAAT4
KLF17
LHCGR
CERCAM
GCSAM
TSPAN18
FYN
DENR
SLFN12
POMZP3
BARD1
SCGB3A2
NAA30
FBXL14
UPF1
POGLUT2
BIVM
DNAJC3
FHL1
CCDC54
PPAT
LOC102723623
GOLGA6L22
GOLGA6L1
RAPGEF5
SESTD1
CCDC33
COPZ1
MOV10
MTF2
FGF13
TRIM14
ADAR
KMT5C
COX6B2
ALPL
SOCS3
KDM2B
F11
GADD45G
MVB12A
BST2
GABRQ
PCDH1
NFKB2
CCL2
TBC1D30
NDUFA4L2
STAC3
PCGF6
TESK2
MMACHC
OR6C3
MCOLN3
URM1
FAM24B
ANGEL1
LRRC74A
DUSP12
GMCL2
CFAP410
ARF6
MGAT4C
PEX12
AP2B1
IL21
ARHGAP22
FRMD7
MID1
USP32
CDC25A
SCAF4
EPHB3
RIF1
FAM180A
ASXL3
WDR49
ABCA13
TECR
KANSL1L
SGMS2
SOX2
HHIP
DNTT
AASS
CRYBB1
OCSTAMP
UTS2R
NEUROG3
TSACC
CCT3
SLC46A1
C1orf100
ZNF664-RFLNA
ZNF664
CCDC92
PLA2R1
RNASE9
ABCA4
LOC100996842
MPDU1
SOX15
GRIP2
RAB15
FNTB
SLC7A5
ABL2
TRIM16L
PLPP3
SYTL2
ZNF438
MPZ
SDHC
FAM131B
SLC10A6
ARID3B
MT1E
HSPG2
ETV4
LHFPL5
EPB41L4B
CLPS
IQCF2
SLC39A8
MINAR1
NAA50
ATP6V1A
SCN5A
CCDC167
KCNN2
NEUROG1
BRDT
NT5DC1
SCARB1
ZNF649
TBC1D1
GABRB3
ATP6V1G1
SPTY2D1
GRAMD2B
OR2B3
OR2J1
ST3GAL6
PKIG
ZIC3
SERINC3
PBDC1
C16orf78
CFLAR
NBPF19
NBPF26
NBPF14
LRGUK
RNASE10
SLC25A5
TTC13
ARV1
ZXDC
PCNX2
ZNF536
BICRA
ETNK2
SOAT1
OCM
C8orf76
CDH26
GAS1
EIF4A2
TESK1
KAT8
BLOC1S2
ZC3H12B
TINAGL1
EBF2
BEND7
NKIRAS2
DNAJC7
ARSL
TLL2
FCRL4
SLN
NANOGNB
CLEC4C
KLHL5
ELOVL6
TCEAL3
POU5F1
PDPN
PRRC2B
CEP135
AMHR2
SLC35F6
FAM126A
FUS
CCDC85A
CCNT1
TEX49
SPIN1
ZNF75D
ETDC
FXYD6-FXYD2
FXYD6
ZBTB45
FRY
PPP1R18
NRM
AGL
RTL8C
SOX5
KNDC1
DHRS3
ZNF624
SRSF4
CDH4
PRMT2
PXDC1
ZMAT2
CAPZA2
SLC25A12
ARL15
IL22RA2
CECR2
SMAD3
UBQLN4
RAB25
LAMTOR2
NMNAT3
ARHGAP36
BUB1
SHF
ZNF600
GPC4
RAB40AL
CCDC172
TRIM71
CCDC9
TP53
WRAP53
ITPKB
MAD1L1
MPV17L2
RAD54L2
ADAMTS9
B4GALNT2
CKAP4
MAP4K3
GPR149
ZNF202
GPM6B
NAXD
RNF187
THEM5
RIC8B
ERVH48-1
VSIG10
C1R
PMEPA1
CER1
FZD5
CCL26
PRKAA1
MCHR1
MS4A12
SLC66A3
SRRM4
C19orf25
TRPM3
PRR14L
DEPDC5
TBC1D23
TUT4
SLC13A2
FAM200B
KCNF1
OR5H1
OR5H14
GATA3
ADGRF5
TEAD1
GJA10
MRPS25
HYOU1
VPS11
THOC2
SQSTM1
MGAT4B
ATP5F1E
TUBB1
THBS2
HLA-F
MARS1
ARHGAP9
SMIM14
NECTIN4
RTN4
ARID5A
DCLK1
MORC1
VOPP1
KRTAP3-2
KRTAP3-1
BEST3
SVOPL
NCBP3
PRDX4
NUP205
MOB1A
ETS1
AKAP7
SPATA22
INTS9
HMBOX1
PROM1
MSH6
NRROS
BLCAP
GNAI2
LHX2
CR1L
IGSF1
RYR2
PADI4
CAPN13
HLA-DQB1
ADGRD1
RBP3
SLC35E4
CATSPER3
RAC3
DCXR
CENPA
TMEM63A
LEFTY1
RASAL2
SLC2A11
KCTD7
DERA
SERPINB6
CCM2
AKAP1
IFRD1
ADGRL2
ACSL1
PROCR
RPS10-NUDT3
RPS10
EPB41L1
RPSA
PIN4
PINK1
DEFB107B
DEFB107A
NEB
EFCAB8
SURF6
SPP1
BTNL8
ELAC2
LOC150051
TMPRSS11F
SLC5A9
EEA1
GALNT8
HSD17B4
PRRC2C
ZIC2
ZIC5
CAVIN3
SERPINB8
HCAR3
HCAR2
ZSCAN12
FRMD4A
RNF135
OR2S2
ZNF532
ANK2
PTPN2
MSX2
SUCLA2
ECHDC1
BCKDK