ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130061 | BJ
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◣ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
RGPD1
RGPD2
MTRNR2L8
EEF1A1
MTRNR2L9
MAMDC2
EMILIN2
ART1
MTRNR2L10
SEC63
TESK2
MTRNR2L1
CD22
TMEM128
VCPKMT
DUX4
MRM3
GLOD4
SOX21
MTRNR2L6
SLC22A14
TMEM87A
GANC
PCGF3
HPCAL1
IQSEC3
RNF125
EPB41L2
SYNJ2BP-COX16
SYNJ2BP
HK1
ARHGAP8
FOXP1
MGAT4A
OR6B3
C1orf185
RASSF8
DEFB107B
DEFB107A
DEFB106B
DEFB106A
DEFB105B
DEFB105A
GID4
ATPAF2
SPON2
CYP2U1
CEP164
BACE1
SNED1
FIGNL1
ZSWIM2
NCOA3
PCDH9
DDAH1
TERB2
OR10A6
TMEM242
AURKAIP1
FAM114A1
EXOC6
KCNIP1
ZNF397
DIPK1A
MCF2L2
EPS8L3
FAM89A
PI4K2A
RAB6A
ACSF2
OR4D1
PLEKHG7
MUC5AC
ZAP70
GTPBP8
LOC102724770
DGCR6
AUTS2
KCNK1
NRCAM
FOS
USP30
OR2A4
CTAGE9
ERGIC2
NBEAL1
IQCH
AAGAB
RPL6
UNC5B
PTPN11
LAYN
OR7A17
OTUD7B
ZSCAN30
CSPP1
DRD1
MYLK
FLRT2
FIBIN
PRDM10
NUTM2D
CEP20
FNDC3B
WNT2B
SCGB1C2
SCGB1C1
ODF3
TMEM42
TGM4
SLC8A1
LRRC70
DEFB132
GALNT5
ESM1
DACT3
PTPRS
SLC16A7
TTBK2
CAAP1
HLTF
GRIP1
OSBPL9
SIK3
PRKACB
RTP3
FRMD3
LTF
FAM120B
CNGA1
FAM13A
PTPN1
SH3BGRL2
EXOSC8
ALG5
NETO2
TRIM48
KRT25
SACS
PPP2R5A
THAP1
KDM4D
CWC15
PDK4
ANKRD53
SPP2
FRMD5
NFAT5
PHOX2B
FAM222B
ATP8A2
SPATA13
MAPK10
TLR4
CHPF2
ABCF2-H2BE1
ABCF2
TMEM263
KIAA1586
PCDHGA1
PCDHGA3
SMC1B
RIBC2
RNF113B
RBM34
PCDHGA2
ABLIM1
ESR1
ADCY10
MYO7A
MOK
AMACR
PFKP
NUTM2E
SIRT3
PSMD13
CERS6
TGM5
PDE6D
COPS7B
SALL1
RAB23
SSH2
DPP3
SPTLC2
LSG1
FAM43A
PF4V1
CXCL6
KDM3A
URGCP
SEMG2
UBE2D4
CHAMP1
A4GNT
DPH6
NREP
CEP57L1
RFPL4B
OR13C5
OR13C2
SLC9B2
HMGB1
USPL1
ALDH3A2
KIF13B
MRPS35
SLX4IP
MKKS
ABCB1
ZNF318
MRPL35
IMMT
MCTP2
SPIDR
TMEM59
TCEANC2
PPIE
LRRC37A
PAICS
MRGPRE
ANKRD36B
SIGLEC15
NOP58
LAMB1
RXFP1
MYC
DHCR24
TMEM171
SAP18
KIF4B
PITPNM2
TAF4B
TRPC4
RASAL2
AIG1
GTF2H2
SLC2A12
DIABLO
EFR3A
SPRTN
EXOC8
NBPF1
NFATC3
WDR75
BAAT
ASXL2
CDC42EP3
TLCD1
ZNF80
C2
CCDC171
RAPGEF4
RGL1
NUP153
SRPRB
NEK8
C12orf56
TIMM9
KIAA0586
GRHL1
EHMT2
ARPC5
MMADHC
NFATC1
C9orf152
UBR2
USP32
SETMAR
OR8B4
ATP6V0E1
ABCA10
MAST2
STEAP1
EIF2S1
ATP6V1D
EFCAB1
TMEM196
SORBS2
CAV1
USP35
KCTD21
KRTAP2-1
KRTAP1-1
KRTAP1-3
CDC42SE2
SRP14
BZW2
ANKMY2
ARHGAP22
H4C12
H4C11
RHOB
ZNF615
CMAS
ALKBH5
GSTM5
NLRP1
MS4A2
MICB
GMPR
VNN2
RAB15
TSPAN13
LSM5
AVL9
FNTB
PRDM2
YWHAZ
STEAP1B
CLTA
HIGD1A
KDM4A
ZNF562
ZNF214
NLRP14
PRDM7
STPG2
CDKAL1
APAF1
TNFRSF19
HCRTR2
IKBIP
NCR3LG1
CR1
LRRN3
NOTCH2NLC
SEC22B
NOTCH2
ZNF385B
DGKB
CEP78
HSCB
CHEK2
ZNF565
RIMKLB
ARHGAP32
AHCYL1
PTPN18
DNAJB2
ROBO4
LMAN2
FAM71E1
EMC10
NXT2
GOLGA6D
MRGPRX3
RERE
DLC1
OTUD1
MYOT
RBFOX2
LPP
BCL11A
L2HGDH
DMAC2L
RNASE4
ANG
DNAH12
P4HTM
EPB41L5
GRB10
NDUFA12
RAD51AP2
MRPL33
MNAT1
PROC
PERP
CMTM6
SIX4
EVC2
EVC
NRBP1
PHF7
BAP1
CCDC28A
PDIA3
KRTCAP3
FGD3
DLL1
ANXA3
SESTD1
CEACAM1
NAP1L1
NPFFR1
PURA
DEFB134
IL17A
ALOX5AP
SCO1
ADPRM
EIF2B3
ZNF337
PLK4
SCG2
SERINC5
PPP1R12A
MED9
CEP85
RXRG
PPM1H
TET2
AGR2
TPD52
OPRK1
TMEM65
LATS1
SUCLG2
NCOA6
ZNF74
GPR107
FNBP1
LIG4
ABHD13
TARS1
SYN3
SLC6A9
KLKB1
SENP7
USP50
UBE2D3
IFNA2
MIPOL1
DDX52
AKT2
POPDC3
RAB21
PLAGL1
PTPRB
NPM3
FGF8
KANSL1
GPR89B
DYNC2LI1
ABL2
SPATA6
WLS
TSC22D1
SMARCE1
STAM2
NUDCD2
HMMR
ARID1A
POU6F1
KRT222
SLC25A17
OR6C2
NRG1
PATE1
PRCP
DDIAS
SLC10A1
RRAS2
SF1
HNRNPM
RCN2
SRSF1
ARSJ
RALBP1
FGF5
USP34
ARL5A
CSAD
SYT2
TUBB
MDC1
ATXN3
PADI2
S100A16
TRIT1
SH3GL3
CYB5R2
S100A14
NEUROG2
AOPEP
NARS1
OTOF
PSMC6
ZNF746
PHGR1
RASGRP3
CCDC9B
ZFYVE1
SOD2
WTAP
SLMAP
TAOK2
KRTAP2-4
KRTAP2-3
TMEM219
TAAR2
KRTAP2-2
FST
WDR26
OR6Y1
SCAF4
DKK3
ARHGAP24
SLAIN1
IGSF11
SCN11A
FBXL4
TYW1B
SEPTIN2
HDLBP
TEX55
IGFL1
ZNF138
TAX1BP1
RNF217
BAZ2B
TRAK1
CDH2
RBM15B
MANF
SESN1
MYCBP
GJA9
HDHD2
VPS26B
NCAPD3
ALDH1L1
SMIM14
PRPF39
DMAP1
ZNF852
OGN
NME6
CCSER2
DNAJC10
CALU
TBL1XR1
DTX4
YWHAE
SELENOI
ADGRF3
PIK3R1
LRRC58
TMEM252
DPY19L2
CMTM2
CMTM1
LYPD6B
C1GALT1
FAM228B
SF3B6
CNOT6
BORCS7
EID1
PDIA5
MPHOSPH8
POGK
EFCAB3
AS3MT
SOX2
MPZ
CLN6
GLRX2
CDC73
RHOBTB1
OR4F5
LEPROTL1
HMCES
DNER
PDE4B
EXOC5
AP5M1
COBLL1
XRN1
COL6A3
TMEM98
GPBP1
HGD
ARID1B
LDHA
ZNF570
ZNF569
TEX36
ERBIN
FBXL20
LDHC
ERCC3
C3orf56
IL17RD
TCF4
RABGAP1L
IGDCC3
PCDHGC5
CCDC146
SP9
MSMP
GXYLT1
STAU1
CALCRL
CREBL2
CNOT9
METTL3
DDX27
CYCS
KRTAP10-7
WASHC2C
URI1
FAM111A
RIMS2
SHOX
NEK5
USP10
SLC43A3
BHLHA15
SHISA9
KRTAP10-8
IGFBP3
NAAA
RPS6KC1
GOPC
MTNR1B
IAPP
SMURF2
YY1AP1
DAP3
MMP16
F13B
ANKRD62
FBXL14
ELOVL5
CALD1
PUS7L
IRAK4
CYTH1
ZNF277
DOCK4
PRRC2C
SEC62
CPM
NAV3
ECT2
PDE4DIP
ZNF624
FRMD4A
SYT16
PRR23D2
PRR23D1
MPZL1
GORAB
CCP110
THAP12
GVQW3
WNK1
PRIM2
RETREG1
PIGL
NCOR1
VPS13D
COL28A1
RNASE9
CAPNS2
C10orf120
RBPJ
ENOX1
ATP6V0D2
UBE2K
SPECC1
FBXW7
MYRFL
SNX9
SLC15A5
PMPCB
ANTXR2
UBE2D1
DHX33
ANKRD17
PPWD1
CENPK
ODAPH
SOX6
TNNI3K
TBC1D23
LYPLAL1
C2CD5
TCF12
RNF20
MAML2
HELB
ENTPD7
SYNGAP1
PSD3
STAT4
G3BP1
ZBTB2
FBXO11
ATOX1
MMS19
SKA2
PRR11
STIM1
NPY1R
LRRC36
NPY5R
GREB1L
TRIM9
SNUPN
NTRK2
STK31
PDE4D
JMJD1C
C11orf58
IGF1
ZNF365
CMYA5
REEP3
MTMR6
BTN3A2
EHHADH
SRP72
TPBG
ANK3
ARHGAP28
CDH11
PHF3
MFF
ANKS1B
CPEB2
MAP3K7CL
CC2D2B
EIF5
POLE4
THBD
TRA2A
SYBU
PPP1R12B
SRPK2
LRRFIP2
FRAS1
TNIK
FBXO25
COPS4
WDR31
BSPRY
FABP9
B3GALNT1
TTL
MRPS9
BTBD10
PRKAA1
PPP1R8
HNRNPR
CADM2
HACE1
ATG4C
NCKAP1
FAM50B
SLFN11
SPA17
SIAE
TXLNB
AGAP5
MOBP
DDR1
SMN2
SMN1
SPATC1L
AGPAT3
IL21
FABP6
PHTF2
NHEJ1
LLPH
RBM7
C11orf71
TMEM60
RREB1
ZDHHC19
USB1
GOLGA1
MND1
VPS33A
ARMC5
COG6
SLC18B1
SGPP1
PSG11
TMEM255B
ZNF319
OR6K6
OR2K2
DDX46
KIAA0895
KLF5
ERMN
FAR2
RAP1A
PTK2
SLC7A11
MARCHF8
KCTD1
LHX9
BUB3
SSX2IP
ANLN
ATP13A3
THYN1
ACAD8
KLRD1
FMNL2
PALMD
KBTBD6
CALHM4
MIB1
PJA2
CLASP2
MED23
EPHB6
ELF1
TP63
MSMO1
TRAF3IP2
ATRNL1
DARS1
GOLGA6L7
TRAPPC3L
CXXC1
FGF20
VIPR1
CLEC14A
C18orf63
ALPK1
ALDOB
FMN1
ZNF189
MRPL50
PIAS1
MAGEF1
WASHC3
DGKH
SLC10A7
CCL28
ANKRD13D
PRKAR2A
NPM1
PRRC1
CCNC
STARD6
C18orf54
C16orf95
HDAC9
SLC20A2
UACA
PTHLH
ITM2B
DLX5
RFC4
PLA1A
ACIN1
YES1
C14orf119
ACTR5
TINF2
ZNF280D
GMPR2
RFTN2
L3MBTL1
NEDD8-MDP1
NEDD8
SMIM19
RPN1
NPC1L1
INO80D
GAS2L3
MERTK
TSTD2
NCBP1
NLRP10
COL4A2
COL4A1
POGZ
KIF15
KIAA1143
FAM122A
ITGAV
SCYL3
HIF1A
TFAM
ARL6IP1
FBXL17
PSG2
DBT
OR7D4
ZNF532
TIAM2
CORO2B
KRT86
PARP2
KATNBL1
RNF115
POLR3C
RPS20
TTC7A
MCFD2
CLSPN
TMEM117
C16orf87
SLC19A2
OR4F6
CRISP1
P2RY12
NACAD
FZD7
ANO3
NBPF9
PPARG
UTP23
CNTLN
GIMAP7
LOC100287896
LIPT2
CCDC34
GABRB1
TM7SF2
POU1F1
CHST9
SMLR1
TAS2R14
GLYATL2
C18orf12
PHC2
SMCHD1
MORF4L1
ANKRD50
SREK1IP1
CWC27
TAF7
SFXN2
ARL3
TRIM23
TRAPPC13
SHLD3
FAM53B
TMTC2
PSG6
PRKG1
DYNLL1
MEF2A
RABGEF1
EHBP1
TMED5
CCDC18
LRP1B
TAS2R39
SRSF9
LOX
SDC2
TRPM6
BTG3
SLC5A7
OMD
GET1
EBLN2
DMXL1
NBPF15
ABCC2
GJA10
LIMS1
NVL
STAG2
LRIG3
NSUN6
ARL5B
ADAM19
KIFC3
MSMB
TPM3
SLC48A1
SSC5D
PTPRO
LYPD4
UBB
P2RY14
ZNF136
FRYL
DEPDC1B
MBTPS1
CIZ1
SCG3
SOX9
OPALIN
LOC388282
METAP2
IFT46
ARCN1
COX5B
ACER3
MCOLN2
SCAI
CROT
ZFY
CXorf38