ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
SMCO1
DNMBP
PHF5A
ACO2
PPT1
FAM227A
CBY1
NRARP
SOX21
HMGB1
MED25
FUZ
PXMP4
ITGB8
SSUH2
ZSCAN2
CYP1A1
MAMDC2
MATR3
WDR74
STX5
GRK6
MAST4
MCCC1
FLG
SLC25A36
DDX17
MTF2
CCT2
UGT1A6
NOTCH1
DHCR24
PYCR2
EPHX1
DLGAP1
COL17A1
LMCD1
COA6
TXNRD3
C3orf20
RFLNA
OR13C5
OR13C2
PTMA
NTF3
SPRY4
RNF183
SIX2
CNN3
FBXL19
PADI2
CYTH2
CDC42EP3
ZNF148
NDUFS5
ZNF80
CDC25B
SPEF1
CENPB
GSTO2
LYPLAL1
TYMSOS
TYMS
PDIA4
EXOC6
PARP16
TMEM88B
ANKRD65
PIK3R3
PIN4
MSMP
SLC16A13
SLC16A11
SOX2
STK31
ADH7
PGAP4
SINHCAF
ABLIM1
SLC9A1
HGS
ARL16
ISL2
UFD1
CDC45
ABCC1
LFNG
TMUB2
PTPRB
DKK3
VWA5B2
MTUS1
ENKUR
SAXO1
RRAGA
FOXO6
TESK2
MMACHC
PSPH
CCT6A
OR10V1
ALDH3A1
GOLGB1
ECT2
HMOX1
KLHL24
MFN1
ZNF775
ARID2
RPGRIP1
TDGF1
LRRC2
PER2
POMGNT1
NEBL
PIK3CA
MUC1
KRT86
VWCE
ZDHHC3
EXOSC7
IQCH
AAGAB
H3C15
H3C14
H4C14
H4C15
EFHC1
KRT16
SLC2A8
PPP1R15A
PLEKHA4
KNTC1
METTL9
ARIH1
CUEDC1
PIF1
SMCP
ST6GAL1
IFRD1
ZFC3H1
THAP2
SH3GL3
TLX3
ANKHD1-EIF4EBP3
ANKHD1
ZBTB6
RC3H2
MOBP
KIF6
ALPK2
ZNF608
VASH2
CORO1C
MMP10
ESRRG
ZNF77
NR1I3
CSK
SNAPC3
KCNJ15
CNKSR3
TGIF1
RRBP1
ZNF304
KIRREL3
WBP11
C12orf60
F11R
RABGAP1
SPAG4
RARB
PKM
PPME1
C2CD3
HSPH1
PIK3C2A
SLC25A25
NDRG4
TOMM40
ZNF436
YLPM1
DLG1
SERINC5
EML2
BCL2L11
ABL2
SRSF7
CDR2L
PHYHIP
POLR3D
KMT2B
PIPOX
PLA2G6
DACT2
GSC2
LTF
PSMB7
NKIRAS1
MRFAP1L1
BLOC1S4
NR1D2
ABO
IL22RA1
ADPGK
G3BP1
CPT1A
ETFB
TMEM17
GADD45A
PALMD
NRCAM
SLC34A1
PFN3
OGA
SFPQ
VMO1
PSMB6
GLTPD2
FAM220A
H2AZ2
UPK3B
SDHD
RNF20
TRIM48
CDKAL1
PWWP2A
NAA10
ARHGAP4
CCL26
KIF5C
LMNA
DPP3
SLC9A8
ZCCHC12
MYOF
CELSR3
PRR15
MANBAL
SENP2
ANXA11
SLC26A9
ABCC5
OAZ2
CDRT15
ACSL6
ELOVL5
COMT
RSF1
AAMDC
OGT
FAM131A
BCL2L1
RASAL2
CHST7
SLC25A11
RNF167
PFN1
GP1BA
DDX5
CEP95
POLG2
STK32C
LRRC27
ABCG1
KRT6A
PCYOX1
TIA1
ZDHHC5
EXOSC2
AKR1C2
PAX6
ABHD11
LYRM1
DCUN1D3
HACL1
BTD
CALCRL
TUBB
MDC1
MCM7
AP4M1
KMT5A
OSCP1
ANKRD1
ZNF680
PRDX1
PLA1A
HDAC9
WDFY2
RBM39
CLUAP1
C16orf90
BCL2L13
RAPGEF5
ZNF273
FER
LGALS8
TAX1BP3
EMC6
LRRFIP2
ERGIC2
NDST1
TBC1D23
YES1
MEIS3
ZSCAN9
CDK12
MED1
GET3
LAMTOR1
ANAPC15
RNF31
PSME2
EMC9
CSRNP2
PSME1
SHC3
ANKRD35
NME7
BLZF1
CHD6
AGPAT3
PLA2G4B
JMJD7-PLA2G4B
JMJD7
PCNP
TSSK1B
SLC33A1
MSANTD4
CEP63
ANAPC13
PIMREG
AIPL1
LIMCH1
PSME3IP1
UNK
H3-3B
RSPRY1
GDF5
BBS7
CEP250
CAPNS2
GAL3ST4
STAG3
GPC2
TBC1D31
TNRC18
LOC100129484
RAB30
KCTD4
PEDS1-UBE2V1
PEDS1
LPIN1
TOMM40L
APOA2
TMTC3
CEP290
SNCA
TRIM2
RTN4
KLHL6
NINJ2
GTSE1
SH3BP4
CAPRIN1
LIMK2
WASF1
CDC40
PTCD2
MRPS27
CALR3
C19orf44
UBQLN4
RAB25
LAMTOR2
SPAAR
HRCT1
NONO
RBMX
ERV3-1-ZNF117
ERV3-1
TXNRD1
HES5
PANK4
NOL3
PSG1
TRADD
HSF4
FBXL8
B3GNT9
DST
TUT1
MTA2
SENP8
MYO9A
SIN3A
EP300
CEP70
ONECUT3
ATP2C1
TES
LEMD2
DHRS12
ARHGAP27
CGB5
CGB2
CGB1
MIDEAS
SCD5
RETNLB
FXR1
SAXO2
EFL1
ITGB5
SHF
PPP1R10
MRPS18B
ATAT1
OARD1
NFYA
DMWD
SLC35E2A
HTATIP2
C1QTNF7
ZCCHC8
HEBP2
TPM1
VPS8
EMSY
EPHB3
UAP1L1
SAPCD2
DENND4A
AHSG
TCF4
SPHK2
RPL18
FAM83E
NFX1
DHX8
ETV5
NARF
CYBC1
NFIB
OLFML1
CRYGB
UQCRHL
AP1B1
GOLGA6A
AP5S1
ZFX
TRMT2A
RANBP1
TSNAXIP1
RANBP10
SMARCC1
SPOCK2
METTL7A
FAM102A
EIF3L
ANKRD54
FGD3
MEX3D
ZNF627
DNAJC21
BRIX1
ST6GALNAC2
NTRK3
NRG1
NWD1
PRXL2A
TTF1
CFAP77
SPRING1
RNFT2
UMAD1
NUP160
TBC1D17
AKT1S1
PNKP
NT5E
WBP1L
UNKL
GJC1
AMELX
FGFR2
ESRRA
CATSPERZ
CDK5RAP2
MIDN
ATP5F1D
APC2
SDE2
RPS15
FAM160A1
ETV6
MUS81
CFL1
MAP3K7
ARHGAP19
SCNN1A
LTBR
NAIF1
TMEM205
CCDC159
RAB3D
PFKM
COL9A2
EAPP
FGD6
VEZT
COPS7A
TMEM221
IER5L
TIAL1
DDR1
DUSP6
NDUFB4
FAM166A
TUBB4B
STPG3
ACAP2
HEXIM2
ADAMTS10
EIF1AX
PSAP
IGBP1
PBLD
HNRNPH3
TTC39B
NCOA4
TSEN2
RIMKLB
MICAL2
OSBPL11
MORF4L1
CRMP1
KDM2A
ERVH48-1
SDF2L1
YDJC
CCDC116
TAGAP
EIF2B5
CHM
RSPH14
RAB36
ABR
RMDN2
MAP3K5
CDC37L1
TYW1
SBDS
REEP6
PCSK4
DPYSL5
TOP1
LOC100509620
SPAST
AKR1A1
PCBP2
RPS6KB2
PTPRCAP
EMP1
DNM2
PRR16
TIGD6
HMGXB3
BAZ2A
ATP5F1B
HNRNPUL1
KBTBD2
NTMT1
C9orf50
GPR137
MYCL
NEFH
TCIM
PKP2
ANO6
GNA12
VIT
ADRM1
SUFU
ACTR1A
UBL7
RABL3
GTF2E1
PSPN
ALKBH7
FZD2
CEP41
TSKS
AP2A1
CCDC88A
PTPN3
RAB5C
RAG2
IFTAP
TNFAIP2
TIAF1
NT5DC4
WDR36
MTHFD1
ACBD7
RAB11FIP1
PIGX
CEP19
PSMD3
LAYN
NACA2
ADAM23
ZBTB45
PLEKHG1
TRIM28
RPL17-C18orf32
RPL17
ZNF695
SLX4IP
MKKS
C1QTNF5
CXCL5
RNF26
C18orf32
PELATON
M6PR
KLRG1
ACP7
PLCH1
ITGB1
PPP1R12B
UBE2T
CCL28
UBE2N
PLA2G2F
ANKZF1
CHSY1
KIF2C
SOX8
LMF1
NAA80
IFRD2
HYAL3
DGLUCY
ZNF609
CLIP4
ME2
MAMSTR
ENDOG
STN1
SH3GL1
CHAF1A
EGR3
TUBB1
TINAGL1
POLR3E
KLK12
CTSZ
KLK11
KLK10
LRRC8A
KYAT1
UNC93B1
ALDH3B1
SHBG
FXR2
SRBD1
TPM4
TSPAN13
RAB11B
PALLD
LRRC72
SRP14
TUBA1C
C15orf40
PTPRH
PLXDC2
ITPK1
HIP1R
VGF
CHST12
TMEM258
FEN1
RFWD3
RELA
PPP6R1
SWI5
GOLGA2
RANBP3L
KRTAP3-2
KRTAP3-1
SF3B5
AP3M2
TFB1M
MAGT1
COX7B
ACVR1B
PRRG4
DUSP1
OSBPL1A
TTF2
YBX1
KRT5
RABGAP1L
SYNE2
NFE2L2
TMEM44
CBLC
CD2BP2
RAPGEF1
DIMT1
IPO11
IREB2
G3BP2
HNRNPC
LRRC23
ENO2
PCID2
CUL4A
EIF3D
TMCC1
UBR2
PELI1
POLR2M
SLC25A28
OTUD3
TCERG1
VIPAS39
AHSA1
MAP2K7
KALRN
ZMPSTE24
TMCO2
ERG
POLDIP3
CEP120
ACTL6A
CSNK2A1
SLC38A5
FTSJ1
CDC42SE2
PICK1
SLC7A11
KDM4A
MSL1
TMEM52
CALML6
SENP7
RNF115
POLR3C
CCDC106
U2AF2
MKRN1
ZNF195
CTTNBP2NL
RAP1A
ZNF624
SLC2A4
XXYLT1
RAB5B
PMEL
CDK2
GOLGA6B
ZNF92
PLA2G1B
MYH11
HECTD4
NDE1
MARF1
ENPP2
TRIP10
GPR108
GSTM5
ONECUT2
TLE3
FEM1A
KRT9
KRT14
SELENOF
HS2ST1
SYVN1
DDX3X
NASP
OSER1
KLF1
GCDH
DNASE2
UTP6
MFAP5
ETV1
FOXP1
KMT5C
SDCCAG8
CEP170
CHST6
ZNF8
ZNF24
AP2M1
ERRFI1
LRP8
FOXN2
SCAF1
RRAS
CCDC146
SVIL
OXNAD1
DPH3
MCTS1
MEOX1
ZNF791
ZNF490
MOV10L1
CEP97
CES1
AKAP14
KRT31
PRRC2B
KLHL5
KIAA0895L
EXOC3L1
E2F4
IP6K2
HSPA13
XRCC5
DIABLO
NEK2
GINS1
ABHD12
PLA2G3
EDN1
GCK
SOX6
ZNF428
SRRM5
BUB1B
C11orf58
RNF225
ZNF584
KCNAB2
TRIOBP
NUDCD2
HMMR
GPR158
TNFSF13
SENP3
CNPY2
TMEM41B
SLC20A2
RBM22
DYNLL1
UQCRQ
LEAP2
GDF9
DYRK1B
COX8A
S100A6
ERCC1
NACC2
CELA2B
KIFBP
CCAR2
C8orf58
TMEM143
SYNGR4
ITGB4
TRAPPC9
EXPH5
LDHA
OTUD5
SMPD3
FZR1
TMC5
NRROS
TNK2
MRPS30
TMC1
PQBP1
TIMM17B
SSR3
RNF217
PPP1R37
NEMP1
TMCC2
COBLL1
SLC3A2
WDR33
TCOF1
SLC4A2
CTH
CDK16
CDK5
ASIC3
TCF3
LCN12
FBXW5
C8G
MYMK
AHNAK
SCOC
CD109
SLC25A45
FRMD8
TMEM107
CEP20
TPGS1
EVI5
PPM1B
TSPAN31
CDK4
AGAP2
MPP7
DYNLT3
SORT1
OLFML2A
NR6A1
TBC1D2
TCP11L1
SIRT4
DIXDC1
MTA3
KCNG3
EMP3
MBNL1
ZNF48
TBC1D10B
MYLPF
NFATC3
CLDN22
CLDN24
INTS9
HMBOX1
DACT3
NCBP2AS2
NCBP2
ARF4
RAC3
DNMT1
TMEM33
CENPX
RBMXL1
KYAT3
LRRC45
STARD7
BAIAP3
MAP2K2
TSR3
GNPTG
CLDN8
TAF12
SYAP1
CTPS2
MRPL34
DDA1
ABHD8
ZNF513
TRIM29
PHACTR2
LOC100996842
MPDU1
SOX15
METTL27
SYP
FAM3C
PRICKLE3
ZNF286A
CD68
NFIA
MICALL1
CDCA3
TMEM270
TM4SF1
TAB2
CCDC171
HNRNPAB
HSD17B12
TBCCD1
DNAJB11
MORC3
DOK3
DDX41
MGAM2
MTPN
LUZP6
ICAM5
ICAM4
SLC7A5
LYRM7
HINT1
TEAD2
DKKL1
MAP3K2
SLC35B4
DNAL1
USP13
GRN
ZFP36L1
ACTR2