ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286344 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◣ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
TMPRSS11E
NRARP
ZNF483
NR5A2
SOX2
SMARCA2
REST
OTX2
NTRK2
TERF1
DPPA5
SERINC5
PIPOX
GOLGA6D
METTL11B
DUX4
CADPS
VCAN
ZSWIM3
ACOT8
TCF7L1
DNMT3B
MUC4
APOBEC3F
CDX2
FAM222B
PHC1
ZSCAN2
SMAD7
SLC7A5
TMEM63A
LEFTY1
FGF1
FAM174B
PLAGL1
CACHD1
SACS
ETS1
HESX1
SOX6
LEFTY2
LZTS1
MTF2
ARHGEF38
NES
SLTM
SFRP2
NRG1
NAA50
ATP6V1A
BCOR
RASGRF2
FAM227A
CBY1
DUSP6
ANKRD1
PRSS48
TGIF2-RAB5IF
TGIF2
TENM4
SRRM4
MFSD4B
SHC1
FLAD1
CKS1B
BDH1
LOC102724770
DGCR6
RNF220
TNNI3K
ZNF608
CD82
POU5F1
DIDO1
GID8
NANOG
GAD2
DAGLB
ZBTB8OS
RBBP4
GOLGA6C
URM1
GIMAP5
NFE2L3
TMEM70
LY96
SSB
FOXP4
SLC46A1
ATG10
FLVCR1
SPATA45
SGK1
HOXB1
PRICKLE1
GLYATL1B
NFE2L1
DNMBP
LDB2
LRRC70
CD99L2
SCGB3A2
PSMD9
HPD
LRRC10B
TENT5B
DEFB113
DEFB114
TARS1
RPGRIP1
RIPK1
SAMHD1
FZR1
RMND5B
CLEC5A
SHCBP1L
DDX46
DMXL1
VENTX
UTF1
ICMT
HES3
ZNF18
PIM2
LRRN3
SMPD1
PHETA2
NAGA
APOBEC3D
APOBEC3C
NAV2
MTHFD1L
EBF2
DHDDS
AGO1
NDUFS5
FRG2C
TIMP4
LRRTM4
SLC5A9
TRMT10C
PAK1
OBI1
PTMA
SALL4
KIF21A
ZFHX3
ZNF343
CER1
GOLGA6B
E2F7
ID3
NDUFA4L2
STAC3
CELF3
RIIAD1
RNASE9
FZD8
CYP2S1
ATP1A4
IFRD1
HDAC9
RPH3A
OR5AR1
HMGB1
SLA2
SDK1
ZBTB40
SOCS3
CD200
DUSP29
SORBS2
PSORS1C2
SALL3
FOXI3
PHF5A
ACO2
DDX43
SPRED2
RTP4
WDFY1
SMCO1
MAST1
RTBDN
FAM227B
COL17A1
GOLGA6A
MID1
PPBP
PF4
ALDH1A2
FAM180A
ZNF398
GSX2
SLC2A14
CBFA2T2
TSKS
AP2A1
IL34
MTRNR2L8
LRRN1
ZNF532
ZIC4
BRINP2
ASTN1
ZIC1
KCNMB4
KDR
PMEPA1
SUCO
GATA3
CLDN9
CLDN6
HES5
PANK4
RNASE6
EDDM3B
CDC42EP3
BOD1L1
SNRPN
DDX17
ANP32A
SDF2L1
GDF11
ARID2
COMMD7
KIFBP
CSGALNACT1
TMEM30A
FOXA2
CAV3
MUC3A
PPP1R16B
LFNG
GPR21
NLRP12
AJAP1
MED25
FUZ
OR6A2
SYNDIG1
EFNB2
CANT1
FGF2
BUB1
NMNAT3
KAZN
SGMS2
ITGB5
TJP3
PIP5K1C
LIPK
TDGF1
LRRC2
LHPP
GLI2
CHMP7
MTRNR2L1
PQBP1
TIMM17B
VOPP1
GAS1
FOXD3
ZYG11A
DDX3X
FGD3
ADAM28
TRIM24
CREB5
C9orf85
ABHD17B
ESR1
ZNF770
PDZRN4
PNRC1
SNX16
CHFR
PCBP1
FRG2
MUC1
RNASET2
ZNF674
ADGRG7
OLFML3
TKT
LMCD1
MYSM1
ITPRID1
KLHL7
C1orf127
SNURF
MAGEB2
ARHGAP42
GADD45G
LARP1B
RAPGEF1
LANCL3
BTG2
PLPP2
TRIML2
TFAP2A
TRAPPC8
CPA2
SH3GL3
RAB4B
MIA
GAST
PPP1R16A
FOXH1
MFHAS1
ZNF775
ZCCHC3
C20orf96
VCPKMT
CITED2
PCNX2
FOXP1
SAMD5
POSTN
TFE3
SDCBP
PRPS1
FAM131B
GNAI2
AKR1D1
NDUFB5
MRPL47
WDR49
FSTL4
C16orf74
ACVR1
KANK1
TALDO1
GABRB3
ZNF781
ARSL
RAPGEF5
BEND3
LRFN5
PBX2
GPSM3
MRPL20
ART1
CCBE1
TUBB2A
CARS1
MICA
WFDC8
DNTT
ENSA
LINGO1
ART3
PLEKHG5
UGP2
TMEM47
CRH
EXOC7
FBP1
FHDC1
MED12
IL2RG
ABCC2
PPAT
RAB17
PAICS
FAM81B
CDC14B
WEE1
CRTAM
PYGM
MST1L
DYSF
OR5K3
EXD2
WNT5B
ONECUT2
GRK6
SH3GL1
CHAF1A
MMP10
AASS
PDE1B
DNAJC25-GNG10
DNAJC25
MAD2L2
DRAXIN
MORF4L2
SEPTIN5
EXOSC9
SMAGP
SYTL2
TNIP1
HOPX
MACROH2A1
TPCN2
ARL15
LIMCH1
GCNT2
IL17RD
APELA
ABHD11
ATP8A2
PXMP4
PITX2
ACOXL
KNDC1
AHCYL2
AGPAT3
HSCB
CHEK2
AKIRIN2
FAM120B
DLL1
EOMES
DACH2
PGAP3
ERBB2
CHCHD3
MCHR1
SMC6
GEN1
SCAF4
USP7
REV3L
PLPP3
RBP3
NFYC
TIAM1
PGBD5
NADK
PRKG1
RASA1
TACC2
ABCB5
FAR2
SCN5A
H3C15
H3C14
SMIM32
GCSAM
H2AC19
H2AC18
FAM24B
TMEFF1
ADAMTS10
NBPF9
FHIT
HLA-A
RGSL1
ZFC3H1
THAP2
AGK
ADAMTS1
WDR74
STX5
MOBP
SEPTIN9
RPS24
DGLUCY
CLCF1
ARAP3
EXT1
TNRC18
LOC100129484
PDCL
PRAC2
PRAC1
HOXB13
ASXL3
NUAK1
RNF24
ABCA4
ISOC2
LHFPL4
CDK6
C1orf100
SNX19
PAG1
HGS
ARL16
DOK7
GCNT1
GALNT18
SLC38A3
FZD2
UNC13B
GJA10
FAM200B
PGPEP1
ZNF831
BCL2L1
PEAK1
HMG20A
PLSCR4
GPR85
INSM1
PARP1
TMPO
ZNF600
SHROOM3
ZCCHC12
FBXW11
TES
DOCK5
PSMG3
EYA1
COL12A1
LHX2
MOV10
SYN3
KCNJ1
SINHCAF
ACSL6
PRMT2
GDPD5
RIF1
CTSF
SHISA5
TREX1
CSAD
ZNF740
ESRP1
HIP1R
GRIA3
CCT2
KLF7
CCDC200
MDN1
PREX2
GAREM1
TNRC6A
ALS2
PTBP2
TUBB
MDC1
PISD
KANSL1L
CSRP2
C7orf57
SUN3
DEFB4B
HK2
TCL1B
CACNA2D1
SHANK2
IDO2
KCNN2
FBXO38
UQCRH
LRRC41
GRID2
GPRC5B
SLC39A8
TJP2
SLC36A2
FZD5
TLE1
CAPZB
TEAD4
PRKAG2
LMX1A
NXN
FTCDNL1
GABRR2
FAM136A
SMN2
SMN1
CELF4
PTX3
CAPN13
AK4
SYDE2
NOTCH1
FUS
LPCAT4
HOXA1
XCL1
HOXA2
TRPC4AP
FZD10
FIBCD1
DET1
KLHL31
ETV1
DPH6
KDELR1
GRIN2D
ISL1
ATP6V1G1
STMN1
WASF1
CDC40
SIN3A
CNOT11
ISL2
COL6A1
TMC5
VIM
TCF4
DHX8
MSI1
GJC1
NXPH2
LNX1
ZNF367
MTCL1
WDR36
SYNPO2
BCL2L11
GPC6
MED4
P2RY12
ANK2
GRIN3A
GLRB
GJA1
GATA6
CAPZA2
GSG1
RYR2
ADA2
BIN2
FZD7
ETS2
SOX4
AKIRIN1
TCEAL3
CRYAA2
CRYAA
ZBTB45
SCARB1
TRIM28
NKIRAS2
DNAJC7
GABBR1
PHYHD1
LONRF3
ZAP70
CAV1
MGAT4C
HRG
SYK
RBM3
SERPINA1
FAT3
CLDN34
KCNIP4
NUP160
YAF2
MKRN1
ANKRD40
YEATS2
LUC7L3
CCDC27
CST1
LBP
ESM1
PADI2
ASIP
TRIM71
LHFPL6
SOX5
PRDM14
SPIC
TRIM13
TRAPPC3
MAP7D1
NELFCD
AGFG2
PPP3CC
NRROS
TAS2R46
UBTD2
VTA1
NMBR
HBG2
HBG1
TNC
SH3BP4
GABRQ
ACSBG1
CARHSP1
LRRTM3
RIC8B
GPATCH8
RCN1
CDH18
RTN4
MARCKS
ZEB2
KLF3
PPP1R1B
MYT1
UNK
H3-3B
SMARCAD1
PITPNM2
CCN3
GCG
TGIF1
SPARC
KBTBD8
SOX21
LEPROT
LEPR
NEBL
DACT1
PSIP1
CCDC9
ARL4D
MS4A12
TTYH1
PALLD
PARP16
MEX3D
ZDHHC14
NPAS3
TBC1D2
TBC1D17
AKT1S1
PNKP
SH2B3
ID1
TMEM43
CHCHD4
SGPP2
GPR31
KDM2A
SENP2
PDIA4
OAZ2
SLAMF1
KDM2B
CFAP20
ARMC12
ITGB8
GSN
UGT1A6
ZNF436
KRT31
TRIM2
FGD4
GBX2
GLRA1
KIF5C
FGFR2
ETV4
COL23A1
NCDN
KIAA0319L
GNAI1
IER5L
STON1-GTF2A1L
CYP1A1
TEKT3
TRIM48
USP44
FIGNL2
NRCAM
SYBU
LCA5
LIN28B
MTRNR2L2
MSH3
DHFR
KMT2B
PALM2AKAP2
ATF4
TESK2
PUF60
FRAT2
TMCC1
APBA2
MCCC1
CYTH2
TRIP4
PCLAF
PER2
MRS2
PHLPP2
FBXL19
FBXO40
MMACHC
MIEF1
WDR55
DND1
ECE1
HOXD11
IQCH
AAGAB
PYGB
SLC35A5
ATG3
TMEM41B
AMN1
SIPA1L2
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
GSAP
CRYGB
NOTCH2NLC
SNAPC3
ITGB3
JPT1
PDPN
ITPRIP
DDR1
MBNL2
SMAD3
GXYLT2
RFX4
SPRY4
DCAF4L1
SLC30A9
SYT2
TOMM40
PRR15
THOC3
FOXB1
ST18
DHX32
WBP1L
SOX14
SASH1
CEP41
ECT2
EAPP
BFSP1
ANAPC4
LIN28A
CTNNA1
MLEC
LRRTM2
KIAA0895
UQCRHL
SULT6B1
TPH2
MTM1
CDYL
ZNF335
EEF1A1
GDF3
MANBAL
SEMA6D
CA6
CAPRIN1
FEZF2
PIN4
L1TD1
TCF7L2
VWCE
SMYD2
SRCIN1
WDFY2
BICD1
HMOX1
ZSCAN10
LIMK2
TRIB2
IGFL3
FOXD1
KLF5
SRSF7
PPEF2
MOG
LMNA
IFT80
GET3
ATXN3
CNN3
TBC1D16
ARIH1
TIAM2
PHRF1
FGF12
NDUFV1
TRPM1
CCDC130
NBPF15
PSME3IP1
MAST4
PRRC2B
STK31
ABO
UGT1A7
KLHL3
SLC20A2
PRODH
LOC102724788
NDST1
KLHL6
DSP
INO80D
WDHD1
SOCS4
RASAL2
LRIG1
DST
ZNF304
LYPD6B
DENR
UBQLN4
RAB25
LAMTOR2
DUSP12
SPIN1
C10orf95
NDUFAB1
CCAR2
C8orf58
GTF2I
TPST2
ERG
KIF6
PYCR2
ANKRD35
CUEDC1
MFSD13A
RBFOX2
PPP2R3A
GMCL2
AEBP2
PLEKHG1
CAPN3
TMEM167B
CHN2
PHAX
ALDH7A1
ZNF34
RGS3
SEC22B
NRBP2
SLC66A2
SOCS5
CHRNA1
PACSIN2
PTAR1
ZNF536
STRA6
TNFSF8
TTC13
ARV1
HSBP1L1
MT1HL1
KRT8
SLC34A1
PFN3
ADAR
LEMD2
VANGL2
ABL2
ESR2
TBC1D14
CAMTA1
EMSY
TMUB2
ANKRD6
ZNF296
GEMIN7
RBM22
RSPRY1
ARID3B
SHF
ROR1
EPHB3
HES1
CHD6
FXYD5
UFD1
CDC45
NECTIN1
NOTCH2
FXYD7
CFLAR
FYN
ZNF565
KDM3A
HHIP
EPB41L1
CSK
URGCP
IRAK1BP1
UBAP2
CCN2
AASDH
C1QTNF7
CTBP2
SOAT1
FAM98A
AUH
NEUROG1
ST3GAL6
RAB15
SIX2
BTBD10
CCL26