ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

GRK6
MTRNR2L2
MSH3
DHFR
KIF5C
MTRNR2L8
FOXO6
MTRNR2L1
G3BP1
PUF60
SCRIB
GET3
DACT3
EMSY
CYTH2
RBBP6
SLC25A11
RNF167
PFN1
GP1BA
NUAK2
RASA3
UQCRHL
ZNF576
IRGQ
PRND
KIFBP
CCT2
TMPRSS9
OSBPL1A
FAM102A
SLC25A25
NAIF1
HGS
ARL16
SPHK2
RPL18
FAM83E
ZBTB2
UNK
H3-3B
CLP1
YPEL4
SYAP1
CTPS2
ETV4
RFX4
DICER1
PLTP
TP53RK
ZSCAN18
HMGB1
SPATC1L
FLYWCH1
IREB2
CTNND2
CROCC
PIH1D1
ALDH16A1
PELI1
FAM227A
CBY1
WBP11
C12orf60
TESK2
MMACHC
TBC1D17
AKT1S1
PNKP
NGDN
NDRG4
REEP6
PCSK4
RRP36
MEA1
TMX2
MED19
NRCAM
POR
TBRG4
HEXIM2
CEP41
OSBPL2
CDK16
ETV1
PRR5L
MTF2
NF2
RSPH14
RAB36
BSDC1
PTMA
IGFL3
ZNF77
CHMP7
DHX9
PSMD3
CHN2
MEIS3
EPHB3
PPME1
C2CD3
TMEM167B
TAF13
MTRNR2L9
PFKM
HNRNPH1
LCA5
YLPM1
CHD1
RTN4
GPC4
HSPH1
BTG1
H2AZ2
INTS9
HMBOX1
SDCCAG8
CEP170
HNRNPL
TMUB2
SMARCC1
NUP214
DIMT1
IPO11
PWWP2A
TPCN1
IQCD
DCTN2
TMBIM6
KIF5A
NRARP
ZNF48
TBC1D10B
MYLPF
DYNLL1
CCDC169-SOHLH2
CCDC169
SORT1
CACNA1S
ASCL5
SENP8
MYO9A
ZBTB45
TRIM28
ATP2C2
EGR3
NRL
DCAF11
DIABLO
CARM1
JOSD1
GTPBP1
TOMM40
TAX1BP3
EMC6
AP3M2
TOB2
TXLNG
MSI1
EHD4
TRDMT1
SUFU
ACTR1A
FZD9
PIK3R3
CDK12
MED1
SPEM3
SPEM2
SPEM1
MBNL3
TMEM139
CASP2
TMEM143
SYNGR4
MAD2L1BP
GTPBP2
C1QTNF5
UFSP2
C4orf47
ABHD2
RNF26
FAM120B
DLL1
MRPL34
DDA1
ABHD8
LFNG
TMEM41B
TUT1
MTA2
SHBG
ELL
FXR2
LGI1
AGO1
RGPD1
RGPD2
PTH2R
ZNF672
FGD3
SAMD1
MISP3
C19orf67
FGFBP3
CTTNBP2NL
SENP2
NWD1
SPAG4
SGCA
ACTR2
HNRNPC
GNAT2
AMPD2
HES5
PANK4
HACL1
BTD
ZNF286A
IL36A
ITGA2
SAXO1
ETV5
RRAGA
ZCWPW1
PPP1R35
MEPCE
DSE
CSPG5
TSPYL4
C1orf127
ARHGAP19
WDR81
TLCD2
DHX8
KMT5C
OGA
FAM181A
TENT5C
CNOT3
HDGFL2
MRPL45
LIX1L
MAMDC2
ZNF775
DERL1
RPL13
HSPG2
ZCCHC8
TPGS1
PPP1R16B
PRMT5
RFX1
NUBP1
RBM23
SELPLG
ZDHHC5
SHC1
FLAD1
CKS1B
FOXB1
NKX2-2
KPNA2
USP44
GAL3ST4
STAG3
GPC2
TCTN3
TEPSIN
NDUFAF8
PODNL1
DCAF15
PIN4
CCAR2
C8orf58
ZFC3H1
THAP2
AHNAK
HPCAL1
ANKRD6
RFX2
CCDC90B
E2F6
SOX21
ETFB
NSD2
LETM1
TOMM40L
APOA2
FGD6
VEZT
HES6
MOGS
WBP1
INO80B
LSM10
LRRC10B
ZSCAN20
ABCB4
TRIM2
MEX3D
RBM39
SLC25A44
CTIF
PIF1
TEX50
CDC5L
RNF169
TUBB
MDC1
LRRN1
TRIM69
NAA80
IFRD2
HYAL3
SPRY4
CHD6
FAM219A
DNAI1
MSANTD4
PRTG
MOB1B
DMWD
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
URM1
GNA12
RPS13
NEURL4
ACAP1
MUC1
NOTCH1
POLDIP3
PIK3C2A
BMF
NOL4
CCDC61
ZSCAN2
CTBP2
PLEKHB1
TP53INP1
DUSP1
RAB5B
PMEL
CDK2
BAIAP2
PC
MPRIP
HYAL1
RRP9
PARP3
MYCL
SPATA13
UCKL1
BANP
WDFY2
CRISPLD1
RNF31
PSME2
EMC9
PSME1
PAIP2B
RPL36
MICOS13
HSD11B1L
DDR1
DNM2
TBC1D31
LRRC23
ZNF251
ENO2
SELENOF
HS2ST1
AQP2
FBXO46
MEIOSIN
AQP5
JOSD2
ASPDH
NOL3
KIAA0895L
EXOC3L1
E2F4
HNF1A
GFRA1
KLF1
GCDH
DNASE2
EVI5L
C12orf71
EPRS1
UVRAG
WDR49
SLC33A1
UNKL
LYSMD3
GRHPR
SESN2
SMUG1
RPS23
ATP6AP1L
TMEM256
PLSCR3
NLGN2
XPC
LSM3
ATF5
NUP62
IL4I1
SP1
PPP2R1A
FZR1
TCF4
DOHH
H3C15
H3C14
H2AC19
H2AC18
CLPB
ZNF195
KHDRBS1
CSRP2
ZFYVE1
CDC25A
RAC3
INVS
ERP44
COMT
MAMSTR
CENPX
TMEM91
B9D2
LRRC45
TGFB1
FGD4
ZNF358
MCOLN1
ZNF548
ASMTL
NEMP1
NAB2
DDX17
TPST2
CCN2
H2BC8
H2AC8
KBTBD6
H3C6
VPS26C
ZBTB20
SEL1L
NDUFB5
MRPL47
SOCS3
TOX3
PCOLCE
MOSPD3
CLIP1
UGT1A1
MROH2A
NDUFS8
PRCC
FUT5
TCIRG1
HDGF
MRPL24
HBP1
GSC2
CPA4
RNF5
AGPAT1
AGER
GGPS1
ARID4B
CDH2
ASPSCR1
NOTUM
KDM2A
VPS37B
ERGIC2
WDR59
SIRT7
PYCR1
MAFG
UBE2S
KNTC1
RPL27
IFI35
PDP1
MRFAP1L1
BLOC1S4
MRPL27
EME1
NDUFB8
HIF1AN
PLAGL1
JAG1
TRAPPC3
MAP7D1
RPUSD4
FAM118B
TICRR
NDUFA5
UXT
ELK1
HEXIM1
SLC25A41
KHSRP
NSUN3
DHFR2
ZNF771
BABAM1
CELSR3
RGS12
ILF3
SRRM1
HDAC9
IER5L
TAGLN3
MPV17L2
RFX3
TRIOBP
C16orf96
BRCA1
TSNAXIP1
RANBP10
CRB2
SPAST
NAA40
ZNF823
EHBP1
TRMT1L
SWT1
SYMPK
FOXA3
ATF4
CRYAA2
CRYAA
SINHCAF
SFRP1
CD2BP2
FAM185A
TRAF7
TOR2A
RAB26
TSPAN31
CDK4
SRF
MARCHF9
RAB5C
SLC35E2B
CDC14B
WBP1L
MUS81
CFL1
ALDH2
AMMECR1L
LUC7L2
FMC1-LUC7L2
FMC1
SF1
PYCR3
GFUS
SHISA5
TREX1
ADAMTS18
NASP
MMRN1
MEGF8
NNMT
NFATC2IP
EPC2
KIFC1
VIM
ITGB1
GID4
ATPAF2
NBEAL1
S1PR4
NCLN
RPL35A
IQCG
LMLN
ADAT1
SIX2
COPZ1
DVL2
VEPH1
CCDC146
RAG2
IFTAP
BMPR1B
PHF23
GABARAP
PIP4P1
OSGEP
APEX1
PNP
SLC35B4
RBM15
LPIN2
ZSWIM4
DNM1L
SND1
TUBA1A
KBTBD3
AASDHPPT
CERCAM
GPATCH8
BBS7
RPS11
RPL13A
DGLUCY
SDCBP
CCNT1
IP6K2
GHITM
CIC
RPS6KA5
PCF11
NUMB
SMARCAL1
UBXN4
PHB2
DPAGT1
H2AX
UBE4B
HMBS
RPL29
ZNF653
LIN52
ALDH6A1
ARIH1
LRP2
PCDH8
C1QTNF2
PRKRIP1
ING4
ELP5
CTDNEP1
RLF
ZNF547
TRAPPC2B
CLDN7
SPC24
BFSP1
CAMTA1
TM9SF1
DPYSL5
COX8A
IPO4
SPRING1
RNFT2
DNAH1
PITX3
GBF1
EXOSC5
BCKDHA
PRPF38A
ORC1
SORBS2
PPP1R15A
SMARCAD1
CALR3
C19orf44
PLEKHA4
BIK
LMNA
VGF
DTX4
TMEM109
PRPF19
CNIH4
E2F1
ABCG1
PI4K2A
DTD2
KATNB1
MORN4
GNB2
PKNOX1
IFRD1
MID1
ZMAT2
ZBTB38
ZNF189
MRPL50
HARS2
HARS1
PANK2
TSPYL1
C1orf189
ERCC6L2
EMC3
POLRMT
CDK5RAP3
FGF22
PDXP
GADD45A
SCOC
USP1
GOLGA5
MTCH2
TCERG1
MEX3B
FOS
ZC3H10
ESYT1
ABHD4
DAD1
INTS4
ADAR
TRAK2
STRADB
SIRT4
PHF12
MXD1
PPP6R3
KRT23
MTMR12
SAC3D1
TENT5B
UBQLN4
RAB25
LAMTOR2
UBR2
OCM
TLE3
TCP11
PUS7L
IRAK4
TMED7-TICAM2
TMED7
JPT2
EGF
GADD45B
BICRA
ACP6
MAP2
PALMD
RND1
PTP4A1
EEF1AKNMT
STRADA
MAGI1
GLRA1
CNN3
DISP3
CFAP20
SRP14
SMARCB1
ID4
PUM3
BBS12
RAB8A
PRKAG2
SYP
PRICKLE3
LMAN2L
CDC6
STAP2
MPND
WDR87
SIPA1L3
PCNX3
MAP3K11
ZNF513
MAP2K7
LARS1
HIBADH
UBE2F
ZFP36L1
PDE4B
RRBP1
TRAF6
RAG1
XRCC5
PAIP2
CAMK2D
SETD1A
ORAI3
POLR3H
SPATA25
NEURL2
CTSA
SIDT2
ZSWIM1
SHANK1
CLEC11A
FBXL19
ANK2
CDK5RAP2
CX3CL1
VMP1
PTRH2
EIF3F
WDR19
MECP2
KANSL1L
SCHIP1
PACSIN3
TCIM
KMT5A
ARFGAP2
PCBP2
PKD2L1
SNRPD2
QPCTL
UBL5
FBXL12
TULP2
NUCB1
TTF2
FRAT1
NUMA1
LRTOMT
FANCC
TNMD
OSBP
PCM1
DDX39A
ZBTB6
RC3H2
PGM2L1
E4F1
ERCC1
KIF3C
PGP
PPP2R5B
ATG2A
DGUOK
NAA35
PMM1
PSENEN
PROSER3
LIN37
IGFLR1
HSPB6
RPS26
ZFHX3
TRIM48
MORF4L2
GOSR2
PTBP1
PDPK1
PSMC4
ALK
U2SURP
CHCHD1
POLK
CERT1
ZSWIM8
PGM1
CEMP1
NEBL
NXPH2
TMEM114
PCYT1B
EFHC1
GPBP1
MTRNR2L10
RPS5
MED25
FUZ
BAHCC1
CRYBA1
LPCAT2
PTTG1IP
SLC4A2
RNF225
ZNF584
CDK5
ASIC3
ZBTB5
SRPRA
SCRT1
HSPA1B
DDX49
COPE
EIF3L
ANKRD54
WBP2
DGAT1
EFCAB6
PDK3
ARMCX4
CUL3
TBC1D23
RUFY3
SPRYD4
MIP
TSPAN19
LRRIQ1
TEX2
BRICD5
MGAM
UBL7
BUB3
PGAP2
HMX2
CENPC
TSPAN17
RPS24
EAPP
ARMC12
SDF2L1
RERE
HNRNPUL1
ABCA5
C10orf120
NR2F1
FRMPD2
ACTN4
DUSP7
POLR3A
WIPI1
EFR3B
CCNG1
RACGAP1
RALGAPA2
C16orf91
NES
SACS
LRRTM3
PRR7
LRFN3
MRPL17
ZNF138
CHD2
ZBTB37
DBN1
TRAPPC6A
BLOC1S3
EGLN2
PPP4R3B
PPM1E
SASH1
PARP16
SOX13
PKIG
TMEM132B
BORCS6
RSF1
AAMDC
FABP7
ABAT
SMPDL3A
FOSB
TGDS
GPR180
RNF10
COQ5
ZNF417
DUSP6
TCF7L2
EP300
ANKHD1-EIF4EBP3
ANKHD1
ZNF254
USP30
ERICH6B
CD68
EIF4A1
GAMT
DAZAP1
GPR3
CD164L2
KDM4B
KBTBD7
RGS3
NARF
CYBC1
EPHX3
CRYGD
SDE2
TM9SF4
MRPL2
KLC4
CUL7
GRHL1
YIF1A
TMEM151A
PGLYRP2
WDR74
STX5
ITGB8
FAM98A
SLAIN1
NBPF1
KIF27
SCAF11
BRD3OS
TPH2
ZSCAN9