ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TRIM24
CADPS
SPRED2
SLTM
P2RY12
TDGF1
LRRC2
CITED2
PPBP
PF4
CREB5
KIF21A
FRAT2
LARP1
SF3B5
ARID2
LRRC10B
CAV3
PALM2AKAP2
TMEM70
LY96
C16orf46
LRRN3
HHIP
REST
CLEC5A
SOX2
EXOSC9
ANKRD1
MRS2
NECTIN1
SHCBP1L
SLC36A2
BDH1
SRPK1
LYPD4
DMRTC2
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PHF3
PRRG3
OTX2
CCN2
SLBP
PSIP1
MTRNR2L1
CNOT6
RPH3A
CRLF2
COTL1
ACSL6
NANOG
MID1
SMIM14
DPPA5
PPFIA1
SLC30A10
HOXD11
HOXD13
HOXD12
VWA1
ATAD3C
PROK1
SOX6
GDF11
C11orf58
ANKRD36
SPARCL1
LRRN1
PHLPP2
ANAPC4
CCDC60
CDH18
CACNA2D1
TNFRSF11A
GMCL2
TMPRSS11E
TERF1
TALDO1
CST1
MEIS1
NDRG2
ZNF692
TRIM16L
FOXO3B
SOX5
SOX13
NRXN3
PRRC2B
MEN1
MAP4K2
KDR
SIX3
RAPGEF4
MTRNR2L8
GLIPR2
C1orf100
RAB5C
MIB1
SCGN
GABRB3
SIN3A
SYN3
GFPT2
AFTPH
SGK1
MAD2L2
DRAXIN
ITPRID1
TMSB4Y
MTRNR2L10
FHDC1
PLAGL1
RNASE6
EDDM3B
PPP1R15A
LAPTM4B
TULP2
NUCB1
LRRTM4
CPNE4
TMX1
TUBB2A
TMEM107
CACHD1
RGPD1
RGPD2
TTLL6
SPDYE7P
POM121
CLDN3
MTRNR2L2
MSH3
DHFR
ARHGEF38
SMCO1
TPTE2
MOBP
SLC2A14
UHRF1BP1L
RAD54B
FSBP
ABCA4
PRPF4
CDC26
FZD8
RASA1
C1QL3
TWIST1
CSNK1E
C4orf50
RAG2
IFTAP
ATG5
CDC42
DEFB113
DEFB114
SLC17A8
PTBP2
SGMS2
NEUROG1
DPYSL5
MEGF10
SULT6B1
MMP24
MTHFD1L
STON1-GTF2A1L
ZFYVE1
PLN
PPP1R2B
NXPH2
TFAP2D
CD82
ZNF781
ETV3
MED13L
BTBD1
PXDC1
PPP2R5A
MYO1E
ZEB2
FGR
RMDN1
PLA2G4A
PRKG1
SDS
OR11H2
CELA2A
RCN1
EYA1
PARP1
MDN1
SLC22A16
HIPK3
ERCC6L
TMPRSS15
PDHA2
MBNL3
CCNT1
SFXN1
NFKBIA
KCNH1
CYP27A1
FMO2
PITX2
GBE1
CER1
RASGEF1B
DSE
BMPR1B
TSPYL1
OBI1
ASXL3
SGMS1
PCDH10
UGP2
KCNMB4
ADD2
ZYG11A
ZIC4
BCAT1
ZIC1
SLC2A12
BNIP3
MCC
HCK
SOCS5
KLK11
KLK10
ZNF608
L1TD1
MAN1B1
CAPZA2
FBXW11
CHRNA1
USP32
NUDT13
BIN2
CTSF
TMCC1
POSTN
KLF5
TLE3
TAX1BP1
ABRAXAS1
PPP1R16A
FOXH1
COBL
WLS
FHIT
RUVBL2
GYS1
CORO2B
HEXB
IL24
KIF5C
SALL3
TRPM3
LITAF
NSUN7
MVB12A
ATXN7
BST2
BCL2L14
PRICKLE2
LRFN3
UBD
THOC7
SH3KBP1
N4BP1
NCOR2
EFTUD2
CCDC103
SPATA3
CASQ2
MTRNR2L6
CRB3
SLC25A23
SOX21
GLRA1
ITM2B
SHC1
FLAD1
CKS1B
CNN3
THRB
TBPL2
DLX4
GPD1L
SOCS3
NR2F2
RGPD6
FTCDNL1
ACCS
PHC1
DDX46
FAM24B
BRDT
RGS2
RNF144B
NPR1
ILF2
EML1
FAM178B
OR6Q1
SNRNP25
POLR3K
C9orf85
OAZ2
NKX1-2
H2BC21
H2AC21
H2AC20
KLF4
CDH12
UQCRHL
CDS1
MOG
MEF2C
ASB4
BCAT2
DMXL1
ICMT
HES3
OTX1
INAFM2
CDKL4
MED12
IL2RG
ZNF302
UBE2G2
GSN
GCNT2
TTC13
ARV1
GUCA1A
HUS1B
TOX
ATP1A4
ETS1
TCF7L2
ATAD2
H4C3
BDH2
HFE
ZNF620
VCAN
PIM2
ADGRL2
GPATCH8
ZFAND6
LRRC20
NTRK2
GAS1
HMOX1
TNNI3K
COMMD7
PPP2R3A
ANGPT1
NPAS1
KCNAB2
APOLD1
IBTK
GALM
PIK3R4
MEIS2
TP53RK
SLC13A3
SMIM31
JPT1
TMC5
LRGUK
PHF8
ANO1
TANC1
CRADD
TRANK1
MRPL20
HOPX
SORT1
FOXN3
ZNF281
PIGH
PCDHA9
PCDHA10
CRH
PLAAT4
FGFR2
FBXL19
GABRQ
FRMD3
CCDC198
SLC6A11
PLA2R1
NAA50
ATP6V1A
GPR85
AMBRA1
CYP27C1
POLQ
QTRT1
SMTNL2
WNT10A
NR5A2
CYP2S1
NPIPB4
HMGCS2
NEUROG3
ENOX1
ZBTB39
TAC3
FGF1
MBNL2
OR13A1
OR2H2
CTBS
CLDN23
ARSA
TSGA10
C2orf15
KDM7A
ECI2
TENT5B
RIF1
DST
STAT6
CWH43
CIITA
GNAI1
RMND5B
NEBL
NKIRAS2
DNAJC7
FRZB
RP1
SCGB3A2
GID4
ATPAF2
CRYZL2P-SEC16B
AGBL2
PRDM8
SERINC5
RNF43
PGAP3
ERBB2
MUC4
GPRC5B
UPF1
HABP2
MS4A4A
TMEM14A
IFNA1
SLITRK4
HSF2
AK4
CBX8
HOXD1
ANKRD36C
SLC25A28
CASP7
ADAMTS8
NGF
ULBP2
GIMAP5
FAM174B
C1orf198
BUB1
ZNF18
FEZF2
RBAK-RBAKDN
RBAK
P2RY14
RASGRF2
ARAP3
NBPF19
NBPF26
NBPF14
HSD17B4
PRR5L
COMMD9
HMCN2
LRAT
SMPD1
ANKRD6
TOX3
PRTFDC1
MFSD4B
CELF4
FOXP1
DDX17
RNASE9
TM4SF1
PANX1
LIMS1
LMCD1
ZAP70
GRHL2
MAPKAPK2
CHRNA9
PRICKLE1
TNRC6A
TOP1
ATP8A2
RDH12
RDH11
CFTR
MRPS31
ZNF532
GCSAM
SIRT4
CNMD
GLI2
SORBS2
TSPAN13
KBTBD8
CREM
LHX8
PTPRN
SLC2A10
TSKS
AP2A1
OR5AR1
ZSWIM3
ACOT8
BEND3
SPIRE1
PSMG2
SMPDL3B
KIAA0895
MFHAS1
ENKUR
MUSK
IDO2
WDR74
STX5
ZBTB8OS
RBBP4
DSC2
NDUFAB1
MAMDC2
DUX4
LOC102724770
DGCR6
NRARP
MTF2
CDX2
NES
NAV2
FAM227A
CBY1
SMAD7
SACS
FRG2C
PIPOX
ZNF483
METTL11B
DNMBP
LFNG
MUC1
ID3
GAST
ZSCAN2
DUSP6
AGO1
HMGB1
NDUFB5
MRPL47
RPGRIP1
APOBEC3F
TCF7L1
URM1
RIPK1
GOLGA6D
CD99L2
FLVCR1
SFRP2
VENTX
UTF1
PTMA
COL17A1
BCOR
HDAC9
MUC3A
FAM222B
TARS1
SPATA45
IFRD1
SSB
ITGB8
SNRPN
ID1
CLDN9
CLDN6
SAMHD1
SRRM4
BTG2
POU5F1
GAD2
MED25
FUZ
ZFHX3
GRK6
ABHD17B
DNMT3B
SHISA5
PLPP2
FRG2
TREX1
UGT1A6
ZNF436
KLHL7
RNASET2
NOTCH1
GLYATL1B
KRT31
ETV1
ABHD11
HESX1
HOXB1
LZTS1
PMEPA1
SLC7A5
CBFA2T2
HSCB
CHEK2
ZNF398
TRIM2
NADK
CELF3
ENSA
NFE2L3
FGD3
FGD4
GBX2
ZNF775
RIIAD1
DDX43
BCL2L1
WFDC8
PSMD9
HPD
ZNF343
TRAPPC8
ETV4
COL23A1
GOLGA6B
CCDC200
LDB2
SNX16
NCDN
KIAA0319L
SALL4
ART1
LEFTY2
GOLGA6A
FZR1
PPP1R16B
RPS24
GNAI2
IER5L
LHPP
GSX2
CYP1A1
TEKT3
DAGLB
TRIM48
USP44
GADD45G
SCN5A
MYSM1
FIGNL2
CSAD
ADAM28
FAM120B
CDC14B
PHF5A
ACO2
NRCAM
ZNF740
SYBU
LCA5
LIN28B
FBP1
FOXP4
FGF2
C1orf127
KMT2B
GOLGA6C
LIMCH1
ZCCHC3
C20orf96
ATF4
MKRN1
SNURF
TESK2
IL34
TMEM63A
SLA2
PSMG3
PUF60
ZBTB40
ESRP1
APBA2
LINGO1
PBX2
GPSM3
MCCC1
LEFTY1
CYTH2
KIFBP
CDC42EP3
RNF220
TRIP4
PCLAF
PER2
FOXA2
NFE2L1
DLL1
SAMD5
FBXO40
MMACHC
SGPP2
PRDM14
MIEF1
WDR55
DND1
ECE1
IQCH
AAGAB
MACROH2A1
PYGB
SLC35A5
DHDDS
ATG3
TMEM41B
AMN1
SIPA1L2
FZD2
STN1
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
LRRTM3
SPIC
NOTCH2NLC
SNAPC3
ITGB3
ZFC3H1
THAP2
PRSS48
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ITPRIP
DDR1
GJA1
SMAD3
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
CCT2
RFX4
LARP1B
EOMES
SCAF4
H3C15
H3C14
DNTT
ALDH1A2
SPRY4
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
PRR15
THOC3
UNC13B
FOXB1
VOPP1
ST18
CRYAA2
CRYAA
PDCL
MORF4L2
TUBB
MDC1
DPH6
DUSP29
DHX32
WBP1L
SOX14
OR5K3
SASH1
CEP41
DGLUCY
ECT2
EAPP
CHFR
CPA2
PCBP1
TGIF2-RAB5IF
TGIF2
EBF2
SH3GL1
CHAF1A
NDUFS5
AASS
SH3BP4
BFSP1
FAM200B
ONECUT2
LIN28A
CTNNA1
MLEC
LRRTM2
FAM180A
NRROS
KCNN2
TGIF1
TPH2
MTM1
CDYL
KNDC1
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
MANBAL
SEMA6D
CA6
SEPTIN5
CAPRIN1
PSORS1C2
PIN4
VWCE
WDFY1
TES
SMYD2
SRCIN1
WDFY2
EXT1
BICD1
TMPO
ZSCAN10
TIMP4
LIMK2
SMIM32
GPR31
TRIB2
IGFL3
FOXD1
CARHSP1
SRSF7
PPEF2
OLFML3
HBG2
HBG1
LMNA
IFT80
RTN4
GET3
ATXN3
BOD1L1
ADA2
TNRC18
LOC100129484
ACVR1
TBC1D16
ARIH1
ZBTB45
TIAM2
PHRF1
FGF12
SLC39A8
SCARB1
NDUFV1
WEE1
KDM2A
TRPM1
PEAK1
HMG20A
CCDC130
NBPF15
TJP2
PAK1
PSME3IP1
MAST4
STK31
ABO
UGT1A7
SERPINA1
KLHL3
ISOC2
TTYH1
USP7
SLC20A2
PRODH
LOC102724788
SENP2
NDST1
KLHL6
DSP
INO80D
WDHD1
SOCS4
PCNX2
WDR49
IL17RD
SLC46A1
PALLD
SEPTIN9
CCDC9
RASAL2
LRIG1
ZNF304
AHCYL2
ANK2
LYPD6B
DENR
VIM
UBQLN4
RAB25
PLSCR4
LAMTOR2
DUSP12
SPIN1
C10orf95
CCAR2
C8orf58
GTF2I
TPST2
ERG
TNC
KIF6
SMN2
SMN1
PYCR2
ANKRD35
DDX3X
CUEDC1
PGPEP1
MFSD13A
RBFOX2
PNRC1
AEBP2
PLEKHG1
CAPN3
TMEM167B
TACC2
CHN2
KCNJ1
PHAX
ALDH7A1
ZNF34
RGS3
SEC22B
EFNB2
NRBP2
SLC66A2
DOK7
SINHCAF
UNK
H3-3B
PACSIN2
AKIRIN2
KLF7
PTAR1
ZNF536
DACT1
NUAK1
STRA6
PXMP4
GCNT1
TNFSF8
PITPNM2
PARP16
FOXI3
HSBP1L1
MT1HL1
KRT8
ABCB5
SLC34A1
PFN3