ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

FRG2C
TNFRSF6B
NRARP
BTNL9
MUC1
DUX4
ARL4D
RPEL1
FRG2
DRD4
FAM227A
CBY1
SPATC1L
TMEM242
MMP8
MTF2
COL23A1
MTRNR2L1
ZNF285
PIRT
TSPAN19
LRRIQ1
CCDC200
EEF1A1
TMEM217
TBC1D22B
RTRAF
GALR1
CYP4F11
SDHAF4
HGC6.3
SPATA33
PERM1
EPN1
COX18
TMTC3
CEP290
ATP5F1E
TFB1M
WASHC4
NUDT4B
NUDT4
COL6A2
TICAM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
THOC3
FAM153B
FAM240C
CBWD5
CBWD3
C6orf89
PPIL1
UBR2
NBPF1
FAM120B
SRBD1
RBM7
C11orf71
EBAG9
PPARD
SOX2
ZSCAN9
SNTB1
KIFAP3
ZFAND3
CTBS
BNIP5
MTMR2
ZNF322
SART1
CBWD6
E2F7
RAB18
CNTN5
PPP1R12A
SLC36A4
SCFD1
MAST4
FRA10AC1
TMEM71
PHF20L1
ZNF718
ZNF595
MOCS1
CMTR1
UTP23
GORAB
RNLS
LIPJ
PARPBP
NUP37
CHMP3
USP49
DYNC2H1
PHACTR2
RGS19
OPRL1
LKAAEAR1
HMGN3
PRKG2
MTRR
FASTKD3
E2F6
TES
SNRPB2
PDE4DIP
DLST
ZNF518A
HFM1
PDGFD
LRRCC1
IRF2BP2
ZNF165
OR1F12
NOTCH2
FILIP1L
MBIP
MAPK1IP1L
ME3
TMEM14B
COL19A1
POLR2J3
BPHL
WDR35
PAG1
CEP126
ANGPTL5
BAG2
SH3TC2
JRKL
CCDC82
AARS2
HDDC2
STARD4
COMMD8
MUC20
OARD1
NFYA
DPYD
TDP2
ACOT13
RBBP8
TMED8
SAMD15
TFAP2A
LMBRD1
EXOG
TMEM260
ZHX3
GPAM
WDHD1
SOCS4
FANK1
TDRD7
C2orf73
TIMM23B
PARG
HLA-DRB1
SSH2
EFCAB5
ARHGAP39
ZNF451
HEATR5B
GPATCH11
METTL25
CCDC59
DYNLRB2
UTP20
GLRA3
CD83
COL6A6
SRPK1
BTBD9
MTNR1A
INTU
FZD6
PELO
ITGA1
SMIM14
HLA-A
MYL12A
PHLDA1
NBN
ZNF330
PTCD2
MRPS27
DYNC2I1
ANKRD36B
EFHC1
CXCL2
NPDC1
ENTPD2
RIOK1
CAGE1
EIF2AK3
DNAJC25-GNG10
DNAJC25
ZNF76
INTS7
DTL
TOMM34
STK4
CGRRF1
LAMC2
MRE11
ANKRD49
CAP2
TNFRSF11B
COLEC10
GTF2H1
SAYSD1
POLN
HAUS3
HPS5
DR1
SLC44A3
ARL14EP
RAD21
CCDC34
CYP2E1
COQ2
SRP9
VRK2
CTNNB1
MCL1
CCDC15
KRTAP2-4
KRTAP2-3
PIK3R1
HTR7
PGBD1
ZC2HC1C
ACYP1
HDGFL1
RNF150
LYPLAL1
TP53RK
IP6K2
CAST
C1orf105
MRPS18A
NTS
SLC13A3
RAD51AP2
KRTAP4-4
KRTAP4-3
PIGC
CEP55
DPH6
SESN3
TMX1
DDX10
TAF7
PCDHGA1
SELENOK
ACTR8
PIP4P2
TIMM23
NUP133
ABCD3
SEL1L
CENPP
FER
NOL8
ATG14
APOBEC2
PELI2
RALGAPB
PRELID3B
DSCC1
DEDD
MAP3K13
DDX60
UBE2N
WBP1L
PTPRK
TUT7
EHBP1
ZNF583
YTHDC2
MSANTD4
TBCA
ZNF326
SCO1
ADPRM
FBXO34
ZNF337
RFESD
FBXO4
ZNF557
RIC8B
ARHGAP24
UTS2B
CCDC50
LSM6
EIF5A2
FAM122A
OSCAR
NDUFA3
MOCS2
MTCH1
STIMATE-MUSTN1
STIMATE
TFPT
PRPF31
OXNAD1
DPH3
DAAM2
CD55
KIAA1586
MRPS16
DNAJC9
ETAA1
CXCL3
SYS1
CFAP299
ARG2
SECISBP2L
L3HYPDH
JKAMP
KRCC1
FAM135A
ZBTB40
ZNF438
CARMIL1
ZSCAN16
TCAIM
EDEM2
BANK1
CNTRL
LHX9
PAQR3
C5
LRRC37A3
C1orf53
ZC3H12C
MPHOSPH6
ADRB2
TRIM68
WIPI1
ADGRB3
SLC25A3
RBM19
SPATA4
FAM76B
CEP57
PDXDC1
SCAND1
ZNF397
RBM12
CPNE1
UTP15
ANKRA2
C4orf3
GABRB3
RGS2
PTGS2
LSM4
CLEC12A
DNAJC6
NUF2
CFAP58
NIPSNAP3A
ERO1A
NAALAD2
PRPF38B
NET1
MROH9
FOXP1
ECT2
TCP11
PRICKLE2
GNPTAB
C12orf73
CA2
TDG
SMC3
APC
CCDC66
SLC25A32
DCAF13
HSD17B7
ERMARD
IMMP1L
ELP4
ANKRD60
SNAPC1
WDPCP
ZSCAN31
APPL2
MDH1
RGL1
MTHFD2L
NT5E
FDXACB1
C11orf1
ALG9
GCH1
GRPEL2
POLE4
EEF1E1
SUMF2
MANBAL
SPTLC2
AKIRIN1
ANKRD36C
NDFIP1
SMG5
GSTA4
GOLGA6L3
TMEM79
CETN3
C5orf51
FANCE
TOMM20L
TTC12
ARIH1
SLC3A2
FGD6
VEZT
WDR77
ATP5PB
CLGN
RNF8
IL6ST
CPOX
CCDC6
DENR
NELFCD
SECISBP2
USP6NL
CKS2
IFT57
DTNB
ERO1B
BBS10
LONRF2
ZNF333
BRAP
ACAD10
SYNE2
MED13L
DGUOK
MAP9
ACTA2
XRCC4
TMEM167A
MAL2
TEX10
RALGAPA2
MND1
SLC35B3
ISOC1
UROS
BCCIP
SAV1
COL14A1
CDC5L
CEP120
OXR1
FAM204A
LIMA1
TBC1D19
MCM3
SH3RF2
ACAT1
EREG
SPATA22
CSRP2
ASPA
PLA2G6
H4C12
H2BC15
H2AC15
CREBZF
PTP4A1
ZNF25
NEDD1
GBP2
PXT1
MFAP3
KCTD20
FAM114A2
RAD54B
ARHGAP19
TNFRSF21
CSDE1
SLC17A5
CLIP4
COL21A1
CEP295
METTL15
KIF18A
RHBDD1
IRS1
MSRB2
ZNF215
OR2D3
FAM8A1
FDX1
MYLIP
ZFPM2
CXCL1
PDRG1
EFCAB13
TFIP11
KDM3A
TMED7-TICAM2
TMED7
RFX1
CUL5
HMGCS1
MED17
TTI1
RPRD1B
LUZP1
ANKRD46
ZNF302
CLTC
MAPKAP1
PIGF
CRIPT
STAC
RABGGTB
PRKD3
RASGRF2
EXT1
CHD6
SDE2
H2BC4
H2AC6
KIF3B
SAMD13
GNPNAT1
AARD
RAB33B
UGGT2
ZNF772
RTCA
RFX4
PKIG
C5orf63
SERINC3
DERA
TMEM30A
PACRGL
CDC7
BIRC2
ACOX3
NME7
BLZF1
HELB
EIF3C
CPE
RABEP1
C6orf226
REV1
SEMA3C
RPP30
TTC29
ARL4A
CCDC39
RPF1
MAD2L1
HYDIN
MTPN
LUZP6
CCNH
EIF3CL
SMIM12
C12orf66
PTMA
TNC
MAML2
RPL5
CD109
GMFB
LPCAT3
ARL17A
POLR2K
FBXO43
ATOH7
TBC1D7-LOC100130357
TBC1D7
ATP6V1C1
CHIC2
SPATA17
GPATCH2
MTX2
AUH
CDK17
OTUD7B
MRPL33
TNPO1
CLASP2
SEMG1
STK38
ZBTB17
ZNFX1
CFL2
PCNX4
NME6
EDEM3
ANXA4
AAK1
SEMG2
CRYBG3
NECTIN4
CR1L
CLDND1
ATP6V0A1
NBAS
MALT1
ACTRT3
ISCA1
MYNN
HSP90AB1
CHRM3
GPR15
KLHDC9
CTR9
ARL6
PIGM
TAF9
RAD17
AK6
ZNF543
RAB32
RBBP9
MOV10
TMEM17
VPS8
PPFIA2
H4C2
H4C1
H3C1
H1-1
SUCLG1
ARMC4
CTXN2
MYEF2
PPIP5K2
RIPK2
PSMB8
HEATR5A
CDC42BPA
TANC2
C4orf19
UBE3B
KCTD10
UQCRFS1
TAP1
PSMB9
GXYLT2
RAB23
RNF19A
CHD1
PRR16
SLC35D1
RNF217
TUT4
CHST10
RBMXL1
KYAT3
MED20
BYSL
SLU7
PTTG1
ENDOD1
TMEM38B
ANAPC10
ABCE1
ARFGEF2
TOMM6
PRICKLE4
FRS3
NT5DC3
UBA6
CTNNBL1
LEMD2
TRPC4AP
MRPL17
ILVBL
WDR27
GLTP
C6orf120
VAMP4
MRFAP1
TSGA10
CCDC112
ERGIC3
SUCO
PRPF39
NCOA3
PDP1
ALS2
GOLIM4
CPD
SF1
FAM13C
MTRF1L
ATRN
COG6
OR2M2
ABCF1
EIF2AK2
TTC13
ARV1
IRAK1BP1
KNTC1
TMEM229B
VSNL1
FABP7
LYSMD3
PLEKHH1
RFX3
RPUSD4
FAM118B
DERL1
MCOLN3
SMPDL3A
NCOA5
CYRIB
VPS37C
LPAR1
KAT7
ATL1
SHOC2
BBIP1
NAXE
GPATCH4
SGPL1
BIRC3
MAP4K5
DYNLRB1
STK17B
NHLRC1
KDM3B
CACHD1
ETS1
DYNLL1
FANCF
EXPH5
GRIA4
RNF182
ZNF124
MRPL2
KLC4
CUL7
FRMD6
MSMO1
TTC17
PPP1CC
RDH14
CDC73
TMEM170B
SNTN
STAMBPL1
C12orf45
SLC25A51
MRS2
UNC13B
TNFAIP8
HARBI1
ATG13
ATXN1
RPIA
TMEM123
NSRP1
GBE1
TXNDC12
BTF3L4
TGDS
GPR180
LGALS3
F13A1
CHMP4C
OGFRL1
ANKRD31
PSTK
SACM1L
PRDM2
YAP1
RBM17
SMAD5
SEC24D
DELE1
EXOC2
STX12
FERMT2
CENPE
C12orf50
C12orf29
SRSF11
NFYB
FBXW2
TASOR2
HMGCLL1
ZNF596
UQCC2
PAPSS1
NAA20
SLC8B1
CCDC130
SNX19
CCN3
ATP6V1G1
MEF2C
TRDMT1
AGL
EXOC5
AP5M1
ACYP2
SFXN1
CTNNA3
ACSS3
MRPS30
CEP135
INTS12
GSTCD
SHQ1
ANKRD28
THUMPD2
PHF3
DLG1
CRB1
PRDM1
ENTPD7
NUCKS1
XRN2
YTHDC1
PTPRQ
TTC14
COL8A1
H3C3
GDAP1
PAWR
CYB5R4
H2BC3
HSPA5
SUCLG2
LOC100996750
KRTAP4-7
CFAP70
SNRPF
VAMP3
ASCC3
GMDS
AKT3
MMUT
CENPQ
RIPPLY2
LYRM4
FARS2
SPIN4
MAK
TRIM32
ASTN2
ZNF804A
RASSF6
LRRK2
LOC441155
MICU2
ZNF266
HECTD1
TSHR
GFRAL
KCNJ2
VWDE
PLCXD3
DEFB112
AGBL4
PPME1
C2CD3
RAD18
ARHGAP5
RNF13
STAM2
TOR1AIP2
CSNK1G3
PPIC
ERMAP
ROCK2
BOD1
POFUT1
PLAGL2
FANCL
PPP1CB
ELMOD2
TRIQK
ZNF700
LSM11
USP38
ZNF32
SART3
ISCU
ZNF445
KIF5B
NDUFAF2
ERCC8
SVBP
ZSCAN26
ZKSCAN4
NKAPL
C14orf28
C7orf25
ARF4
CCDC88A
ZCCHC4
CTSC
H2BC17
H2AC17
APAF1
NUDCD1
RORB
PEX3
ADAT2
H3C12
FAM149A
IKBIP
BMT2
ZFYVE9
TET2
TRPS1
BLMH
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
TM9SF3
OR2L13
OR2AJ1
AK2
DNMBP
DDX46
PTPN2
C2
ZNF391
CGGBP1
PHF20
LRRFIP2
ZNF654
FAM83B
EIF2B2
EHMT2
HAPLN1
BRINP3
TDP1
EFCAB11
ZBTB12
THAP9
SEC31A
DNAH14
USP2
GPCPD1
PIH1D2
NKAPD1
RAB38
EIF2D
RAB11FIP2
TAF11
ANKS1A
LAMTOR3
RNF180
UHMK1
PTGER2
DHRS4
KTN1
ANKEF1
WWP1
DEPTOR
TMEM19
SORBS2
KRBA2
STX16
RERE
HNRNPUL1
H4C9
H2BC11
H2AC11
PPP1R11
CLK4
RNF39
COPS3
RPL26
POLR1H
RWDD1
SESN1
CEP57L1
DDX1
MIPOL1