ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
NAV2
NRARP
MANBAL
IQCH
AAGAB
THOC3
VANGL2
NEK6
KRT31
ITGB8
MAMDC2
RCOR1
TRMT2A
RANBP1
CCDC88A
FZD1
INTS12
GSTCD
BAHCC1
SLC33A1
DUX4
LCA5
NOTCH1
ACAP2
SMAD3
UNC13B
SNX16
PLA2G4B
JMJD7-PLA2G4B
JMJD7
WDR74
STX5
MLEC
WDFY2
VWCE
GFM2
ADAM28
TNRC18
LOC100129484
CYB561D1
ATXN7L2
PTMA
PHYHD1
ZBTB40
KDM3A
ARID2
TJP2
PEX3
ADAT2
POLB
MTRNR2L1
GBA
TMEM262
TRMT1
NACC1
NDUFB5
MRPL47
RAET1E
SLC2A8
CTSV
WDR36
HEXIM1
RFLNA
TM9SF1
IPO4
KLF7
OR10V1
EAPP
CEP63
ANAPC13
ZFAND3
OGA
TUT1
MTA2
MRPS14
PER2
DENND2D
CFAP20
STAU2
ZNF335
PGK1
ZSCAN2
PTCHD4
F11R
SYNCRIP
LIMK2
RASAL2
CHSY1
MTRNR2L8
HSPH1
ADGRG7
PPDPF
RTRAF
ASF1A
BARHL2
TSC1
GFI1B
MRPL48
TMCC1
GALNT10
FAM168A
CCDC152
PIK3CA
SLC9A9
COL9A2
ACOT1
HSPA4L
ZNF503
SLC44A1
HMGB1
PYCR2
TUT7
USPL1
FAM227A
CBY1
TP63
PACSIN2
IGFL4
CYTH2
ZNF195
ARL4D
HEBP2
FRG2C
TTC39C
CCL24
SOX14
KLHL6
ZNF37A
RAB23
KRT6A
FBN1
MYEOV
POMT2
GSTZ1
LGR6
COL17A1
MRPL44
H4C12
H2BC15
H2AC15
H4C11
NDST1
FNBP1L
SECISBP2
CKS2
FRA10AC1
GSN
CHST6
LSG1
TRIM2
SSBP1
ARIH1
YLPM1
DDX17
GSC2
MTRNR2L2
MSH3
DHFR
KMT2A
KIF5C
FANCI
NOXA1
SLITRK3
FGF19
GABPB1
PAXBP1
TMEM205
CCDC159
RAB3D
BZW2
ANKMY2
TMEM88B
ANKRD65
PPP1R13B
CAPRIN1
ZBTB6
RC3H2
CHD8
MKNK1
MOB3C
PTPRK
PAN2
IL23A
CCDC200
FMNL3
OGT
CELA3B
MED23
ITGB1
JUP
TAGLN2
KDM2A
ZNF440
GPC1
MRPL3
ZNF426
AP4E1
LY6G6F-LY6G6D
LY6G6F
MPIG6B
LY6G6C
LY6G6D
BCAS1
GOLM2
DKK1
CLPB
GRK6
ANXA11
SKIL
NREP
GBP6
UBTD2
CNN1
ELOF1
RBMXL1
KYAT3
MUS81
CFL1
LAMTOR1
ANAPC15
PHF5A
ACO2
CACNB2
BMS1
NUPR1
CYP2S1
ITPRIP
RMND1
ARMT1
PPP1R18
NRM
DKK3
STN1
FMN1
SHC3
SPDYE14
SPDYE10P
CASTOR2
ENKUR
DSTYK
C17orf75
ZNF207
EIF4A2
KIRREL3
MSANTD4
SOD2
WTAP
INSM1
KMT5B
PGBD2
MRPL21
IGHMBP2
TMEM132A
FSCN1
SMIM35
VWA2
TMPRSS4
SPIN1
CCAR2
C8orf58
STMN1
RAPGEF5
USP30
INSC
ADRM1
LBH
CHD6
PAFAH2
SLC43A2
CLTC
POLR3E
CPSF4L
SLC29A3
BAIAP2
UPK3B
SHF
GREB1
DUSP6
ALCAM
LMX1B
RARB
ESRP1
GPR137
PRKCI
SAMD1
MISP3
C19orf67
DGLUCY
FAM83G
TRAPPC9
EDN1
SLCO1B3
SLCO1B3-SLCO1B7
H3C15
H3C14
H2AC19
H2AC18
H4C14
GALK2
EIF3F
TNFSF15
COPS2
ANTXR1
ID1
CEP41
RAB11FIP1
RBBP5
TIPARP
TMEM242
MTMR1
C1orf116
AAR2
TMEM41A
ZNF23
RNF31
PSME2
EMC9
PSME1
ZNF865
ZNF524
FIZ1
RPL27
IFI35
SLC25A45
FRMD8
H2BC14
H2AC14
FGD3
TRAK2
STRADB
PPIP5K2
CYB5R2
COX16
SUGCT
MPLKIP
MNAT1
SPHK1
TRDMT1
EPS15L1
IRX4
SINHCAF
NCOA7
BRMS1
B4GAT1
MUC3A
PTGES2
MCCC1
ZNF106
SNAP23
CEMIP2
STX16
OTUB2
TES
KNL1
CAV2
AFAP1
GOLGA7B
MRPS31
PHAX
ALDH7A1
SSR3
BICD2
FAM102A
PHIP
GAST
RBFOX2
NUF2
FBXL19
NFIX
POLG
ZNF791
ZNF490
ADAR
NUP160
ATAD3A
PBX2
GPSM3
CSRNP2
NSUN6
ARL5B
ZNF408
ARHGAP1
SLC35A3
TNS4
GAS1
SPATA12
ZBED5
NDUFS3
KBTBD4
FAM180B
TMEM101
YEATS2
NPIPB4
YWHAQ
YDJC
CCDC116
MTDH
SRPRA
BCL2L1
PHLDB2
MIDEAS
PHRF1
GRAMD2B
CEMIP
ZSCAN9
MYMK
OR4F17
ABCA13
KLF1
GCDH
DNASE2
ZBTB8OS
RBBP4
GET3
MARCKS
HEXIM2
EXOC5
AP5M1
ITGB4
ATAD2
CACYBP
CDKL3
UBE2B
NIBAN2
N4BP1
NFKB1
MICB
CCDC57
GCHFR
C15orf62
UBB
SUSD4
LEMD2
OTX2
TRIM48
MRPL42
MRPS18A
H4C15
SPRED1
GPR84
NPIPB8
TEFM
VTA1
NMBR
VARS2
GTF2H4
GTF3C5
PLPP2
RBM39
TBC1D13
ARMCX5-GPRASP2
ARL2BP
ARMCX5
IKBKB
PPP1CC
H2BC17
H2AC17
TBPL1
OR2B2
MAPK6
COMMD2
RTTN
LNX1
NASP
FAM220A
KLHL38
ITGB6
GTF2H2
CELA3A
OLFML2A
NR6A1
TCF12
EIF3E
ZNF627
SGCA
CHMP4B
LTBP1
DNTTIP2
SMUG1
C11orf49
ZNF436
ETV1
NOTCH2NLC
ABO
NOTCH2NLB
NOTCH2NLA
OPN5
ANKRD40
NCBP2AS2
NCBP2
MAP3K9
NFE2L2
C2orf42
DISP3
PIMREG
AIPL1
SMARCE1
ERLIN2
ASXL1
SELENOH
RNF103
CTDSP2
MAPRE2
PRKDC
MCM4
NPIPB12
NPIPB13
PSMB7
TMEM138
CYB561A3
USE1
ANKRD22
CCT2
RTN4
HMGN1
BUB1B
ASB2
B3GLCT
UBE2F
CUEDC1
PTX3
LPP
EFHC1
NTMT1
C9orf50
SLC24A1
SRSF6
DRG2
NPAS4
PHF21A
NDUFS5
WDPCP
MDH1
GTPBP3
ANO8
CALM2
CHD2
TRAF1
PNRC1
RABGAP1
BCAR3
ZBTB26
ADGRF4
GTF2H2C_2
GTF2H2C
SCOC
KAT6A
MEGF9
GLIPR1L2
STK35
PALD1
FAM227B
KLHL24
DTWD1
RCOR2
ALG10
FRG2
ETV4
CLCF1
PAIP2
RALGDS
FAM189A2
SIPA1L2
NTF3
MS4A2
UFD1
CDC45
ZER1
ONECUT3
PDE6D
COPS7B
RUVBL1
TRUB2
COQ4
ITPK1
EGFR
EXOSC2
DEFB110
PEDS1-UBE2V1
PEDS1
SSBP2
MNT
PCNP
SFT2D2
ESRRA
CATSPERZ
ID4
SNAI2
TOX2
STAT1
UNK
H3-3B
BORCS6
POR
DNAJB2
CALM3
RBL1
PPP5D1
NTRK2
SLC3A2
PTPRN2
SMARCB1
OLFML1
POLR2M
ACOT2
LOC100132202
CCNL1
POLDIP3
C16orf46
CCNG2
GOLIM4
ZMPSTE24
TMCO2
RABGAP1L
GARS1
CD55
BRF2
WDR24
STUB1
JMJD8
IFRD1
KRT86
RAPGEFL1
ZKSCAN8
FAM98B
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
NME1
TRIP4
PCLAF
DUSP1
RGPD1
RGPD2
PIH1D2
NKAPD1
CHST15
FGF7
TMEM41B
ZNF391
NELFCD
FHL2
STK3
OSR2
DMAP1
AGO1
OAZ2
TBCA
UQCRQ
LEAP2
GDF9
ARL14EP
RPS7
AADAC
NPIPB5
LFNG
DLX5
RPS21
GADD45GIP1
SMCO1
TCF7L2
ABCC10
PSMD3
PCYT1A
RNF168
KLRF2
CLEC2B
SPRY4
VIT
DRD4
EDARADD
CORO1C
MAP4K4
DCLRE1A
MACROH2A2
CCDC85B
LRRC37A3
FIBP
NHLRC2
CTSW
SH3BP4
PDIA4
NEFH
AQR
FCHSD2
FGF1
CREM
TP53AIP1
BRWD1
FAM160A1
RAB20
PC
C18orf21
SYT1
HR
TCP11L1
CDK5R1
UBASH3B
IQSEC3
KLF12
FOSB
CDKN2AIP
HSPE1-MOB4
HSPE1
HSPD1
NAB1
PLEKHO1
ERAP2
ZDHHC5
CLP1
CCND1
C11orf86
TPR
ODR4
RAD23A
CALR
NPIPB11
CAMSAP1
C1D
ZNF230
AHSG
CTNNB1
CSTF2T
GATA6
ZDHHC3
EXOSC7
MEIG1
DCLRE1C
ALS2
ZNF443
ZNF326
RASEF
STK32C
LRRC27
IREB2
PRXL2A
USP6NL
SLC35E2A
MRPL16
EIF1AD
CST6
BANF1
RAB18
PRMT5
ZNF76
USP14
KMT2B
CPT1A
TMSB10
BACH2
FXR1
ZNF561
NSFL1C
PPIA
PDXDC1
USP47
SDK1
ID2
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
BHLHE40
EPC2
PDCD4
TTC32
SERPINB5
ATF4
FANCF
FAM83B
ZNF33A
ONECUT2
ANXA2
TMEM68
TGS1
SAMD12
NR1H3
ADAMTS8
B4GALNT3
ACP2
SYAP1
CTPS2
GPR39
TGM2
TMEM167B
SORBS1
CDK12
MED1
PSMD14
PPP1R9B
C11orf95
SMTN
ZBTB25
ZBTB1
HDAC9
RFFL
LTA4H
ZNF117
RBBP8NL
CCDC88C
HBP1
LRRC8A
KYAT1
YWHAZ
SCPEP1
DSG3
SOX21
TSPAN14
CPNE2
BLOC1S5
P2RY2
SRSF7
PARP16
ZNF292
SRSF3
KAT6B
RXRA
RILPL1
CCDC24
IST1
FOXP1
PEX12
AP2B1
IGF2BP2
E4F1
METTL9
RPTN
PGAP4
POC1B-GALNT4
POC1B
GALNT4
DNASE1L2
CRLF3
ATAD5
DPY19L4
PCYOX1
TIA1
TINAGL1
FAM3C
ZFAT
DAPP1
SMC2
ISY1-RAB43
ISY1
GADD45G
CEP120
C15orf40
DTD2
MTBP
MRPL13
CYB5R4
STX10
IER2
CSK
ISL2
SFPQ
PCSK5
TOP3B
ANGPT1
SPEM3
TMEM87A
GANC
PPFIBP2
STARD13
ZNF518A
TMEM102
FGF11
CHRNB1
PEMT
YBX3
ENTPD6
PCNA
TMEM230
ZFC3H1
THAP2
C2CD5
JMJD1C
PALMD
MFGE8
CCNJ
UCKL1
LRP6
SPINT1
TRIM29
FAM171A2
PHKA2
PBLD
HNRNPH3
BCL9L
PPARGC1B
GOLGA6L10
KSR1
ZNHIT2
MRPL49
FAU
ANKRD46
EIF2D
SNX27
FIGNL1
MLLT11
CDC42SE1
GFM1
WDR27
FARSA
C6orf120
SOX2
SYT2
SLC25A36
WASF1
CDC40
VCPKMT
FRRS1L
YPEL4
ABHD16A
RAB14
WDR11
KRT80
ZC3H6
ALKBH3
CCDC117
POU2F1
SPRING1
RNFT2
FAM228B
SF3B6
TP53I3
ERCC6L2
RAD51AP1
C12orf4
ZNF354C
TTC14
TSEN54
LLGL2
CASKIN2
PMEPA1
FAM83A
PSMC3IP
PSMF1
CENPE
FETUB
GTF3A
EPB41L1
FRY
GSG1
ZNF184
TPM1
GNAL
CHMP1B
PSMD1
GNG4
RABL2B
OPA1
SNX8
TMEM249
SLC52A2
FBXL6
ABLIM1
MAN2C1
ZNF124
ANKK1
NPIPA3
NPIPA2
SHOX2
RSRC1
BCL3
HNRNPA1L2
ZBTB33
RASA2
TIMM22
SLC36A3
ARMC12
LLGL1
GRAMD1C
COPS7A
MAPK8
TMC1
MKRN2OS
MKRN2
YIPF2
TIMM29
KLF9
FKBP5
SPRR2E
ANKRD39
HGS
ARL16
ZSCAN12
PTPN6
C12orf57
PHF14
KATNB1
GOLGA6L9
PRPF18
ST8SIA6
PLEKHG4B
ADO
ART1