ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968908 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◣ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
TRIM48
WDR74
STX5
DUX4
MTRNR2L1
NT5E
MTRNR2L8
C1orf198
COL23A1
LOC102724770
DGCR6
NGB
MUC3A
CCDC102B
PGK1
MTRNR2L2
MSH3
DHFR
MBP
MTF2
VWCE
LRTM1
LOC100509620
LMCD1
SOX21
TMEM200B
FYN
CCDC200
TMTC4
ATXN7
SOWAHA
SHROOM1
NRARP
SMARCA2
REST
CDX2
SOX2
TMPRSS11E
NES
NAV2
FAM227A
CBY1
NR5A2
DPPA5
TERF1
SMAD7
SACS
SOX6
FRG2C
PLAGL1
ARHGEF38
CADPS
PIPOX
OTX2
ZNF483
METTL11B
ANKRD1
DNMBP
LRRC10B
MUC4
LFNG
MUC1
ID3
GAST
ZSCAN2
CACHD1
DUSP6
AGO1
HMGB1
ZBTB8OS
RBBP4
NDUFB5
MRPL47
RPGRIP1
NRG1
ATP1A4
APOBEC3F
SPRED2
NTRK2
TCF7L1
RMND5B
URM1
RIPK1
PIM2
GOLGA6D
CD99L2
FLVCR1
BDH1
SFRP2
LRRN1
VENTX
UTF1
PTMA
COL17A1
BCOR
TENT5B
LRRN3
HDAC9
FAM222B
TARS1
SOCS3
SERINC5
GIMAP5
FGF1
ZNF608
SHCBP1L
SPATA45
IFRD1
PPBP
PF4
SGK1
GDF11
PHC1
CD82
SSB
MFSD4B
ITGB8
SNRPN
ID1
PRICKLE1
CLDN9
OBI1
KIF21A
MTHFD1L
CLDN6
TDGF1
ZSWIM3
ACOT8
SAMHD1
RPH3A
SRRM4
BTG2
MOBP
SHC1
FAM174B
RNASE6
C9orf85
FLAD1
CKS1B
LRRC2
OR5AR1
EDDM3B
POU5F1
GAD2
MED25
FUZ
SMCO1
SLTM
ZFHX3
FBXW11
GRK6
ABHD17B
DMXL1
TALDO1
GSN
ETS1
DNMT3B
TNNI3K
SHISA5
PLPP2
FRG2
NANOG
TREX1
SMPD1
UGT1A6
ZNF436
KLHL7
RNASET2
NOTCH1
SCGB3A2
GLYATL1B
ARID2
MED12
IL2RG
DDX17
KRT31
ETV1
ABHD11
HESX1
HOXB1
KDR
LZTS1
RASGRF2
PMEPA1
SLC7A5
CBFA2T2
HSCB
CHEK2
ZNF398
TRIM2
MRPL20
NADK
CELF3
PPP1R16A
ENSA
NFE2L3
FGD3
FGD4
GBX2
GLRA1
ZNF775
RIIAD1
DDX43
FOXH1
KIF5C
HOPX
BCL2L1
VCAN
FGFR2
WFDC8
PSMD9
HPD
ITPRID1
ZNF343
RCN1
TRAPPC8
ETV4
GOLGA6B
GLI2
GAS1
NAA50
ATP6V1A
LDB2
SNX16
NCDN
KIAA0319L
SALL4
ART1
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
FZR1
GNAI1
PPP1R16B
RPS24
BUB1
GNAI2
CER1
CELF4
IER5L
STON1-GTF2A1L
LHPP
GSX2
CYP1A1
TEKT3
TMEM70
DAGLB
USP44
GADD45G
ZNF18
SCN5A
ICMT
HES3
ATP8A2
MYSM1
TRIM24
FIGNL2
CSAD
ADAM28
FAM120B
GPRC5B
CDC14B
PHF5A
ACO2
NRCAM
FZD8
LY96
ZNF740
SYBU
LCA5
LIN28B
FBP1
PRKG1
FOXP4
FGF2
C1orf127
KMT2B
GOLGA6C
MFHAS1
PARP1
PALM2AKAP2
PTBP2
LIMCH1
DDX46
ZCCHC3
C20orf96
ATF4
MKRN1
SNURF
GCNT2
TESK2
CYP2S1
IL34
TMEM63A
SLA2
RIF1
SOX5
PSMG3
PUF60
ZBTB40
FRAT2
FOXP1
ESRP1
TMCC1
APBA2
LINGO1
PBX2
GPSM3
MCCC1
LEFTY1
CYTH2
KIFBP
CDC42EP3
RNF220
TRIP4
PCLAF
PER2
MRS2
SGMS2
PHLPP2
FOXA2
NFE2L1
FBXL19
DLL1
SAMD5
FBXO40
MMACHC
SGPP2
PRDM14
MIEF1
WDR55
DND1
ECE1
HOXD11
IQCH
AAGAB
MACROH2A1
CRH
MDN1
PYGB
ZEB2
SLC35A5
DHDDS
ATG3
SALL3
TMEM41B
AMN1
SIPA1L2
RASA1
FZD2
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
CREB5
LRRTM3
SLC2A14
ZNF532
SPIC
NOTCH2NLC
SNAPC3
ITGB3
SORBS2
ZFC3H1
THAP2
P2RY12
PRSS48
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
ITPRIP
CDH18
DDR1
GJA1
MBNL2
SMAD3
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
CCT2
RFX4
LARP1B
MAD2L2
EOMES
SCAF4
TMC5
MID1
H3C15
H3C14
DNTT
ALDH1A2
SPRY4
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
DRAXIN
PRR15
THOC3
GABRB3
UNC13B
FOXB1
VOPP1
ST18
POSTN
CRYAA
CRYAA2
BEND3
PDCL
MORF4L2
TUBB
MDC1
DPH6
DUSP29
DHX32
WBP1L
SOX14
OR5K3
SASH1
CEP41
DGLUCY
ECT2
EAPP
CHFR
CPA2
COMMD7
PCBP1
TGIF2-RAB5IF
TGIF2
EBF2
SH3GL1
CHAF1A
NDUFS5
AASS
SH3BP4
BFSP1
FAM200B
ANAPC4
ONECUT2
LIN28A
CTNNA1
MLEC
LRRTM2
KIAA0895
FAM180A
UQCRHL
SULT6B1
NRROS
KCNN2
TGIF1
TPH2
MTM1
ASXL3
CDYL
KNDC1
C1orf100
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
LRRTM4
MANBAL
SEMA6D
CA6
SEPTIN5
CAPRIN1
SIN3A
PSORS1C2
FEZF2
PIN4
L1TD1
TCF7L2
WDFY1
TES
SMYD2
SRCIN1
WDFY2
EXT1
BICD1
HMOX1
TMPO
GABRQ
ZSCAN10
TIMP4
LIMK2
SMIM32
GPR31
TRIB2
IGFL3
FOXD1
KLF5
CARHSP1
NEBL
SRSF7
PPEF2
OLFML3
HBG2
HBG1
MOG
LMNA
IFT80
RTN4
GET3
ATXN3
BOD1L1
ADA2
CNN3
TNRC18
LOC100129484
ACVR1
TBC1D16
ARIH1
AK4
ZBTB45
TIAM2
PHRF1
FGF12
SLC39A8
SCARB1
NDUFV1
WEE1
KDM2A
TRPM1
PEAK1
HMG20A
CCDC130
NBPF15
GCSAM
TJP2
SLC36A2
PAK1
PSME3IP1
MAST4
PRRC2B
STK31
ZNF781
ABO
UGT1A7
SERPINA1
KLHL3
ISOC2
TTYH1
USP7
SLC20A2
PRODH
LOC102724788
SENP2
NDST1
KLHL6
DSP
CACNA2D1
INO80D
WDHD1
SOCS4
PCNX2
WDR49
SYN3
IL17RD
SLC46A1
PALLD
SEPTIN9
CCDC9
RASAL2
LRIG1
DST
ZNF304
AHCYL2
ANK2
LYPD6B
DENR
VIM
UBQLN4
RAB25
PLSCR4
LAMTOR2
DUSP12
SPIN1
GPR85
C10orf95
NDUFAB1
CCAR2
C8orf58
GTF2I
TPST2
ERG
TNC
KIF6
SMN2
SMN1
PYCR2
ANKRD35
DDX3X
CUEDC1
PGPEP1
MFSD13A
RBFOX2
PPP2R3A
PNRC1
GMCL2
AEBP2
PLEKHG1
CAPN3
SNX19
CITED2
TMEM167B
TACC2
CHN2
KCNJ1
PHAX
ALDH7A1
ZNF34
RGS3
SEC22B
EFNB2
NRBP2
SLC66A2
DOK7
SOCS5
SINHCAF
CHRNA1
UNK
H3-3B
PACSIN2
AKIRIN2
KLF7
PTAR1
ZNF536
DACT1
NUAK1
STRA6
PXMP4
GCNT1
TNFSF8
TTC13
ARV1
KCNMB4
PITPNM2
PARP16
FOXI3
HSBP1L1
MT1HL1
KRT8
OAZ2
ABCB5
SLC34A1
PFN3
MAST1
ADAR
LEMD2
TMEM47
VANGL2
DET1
APELA
H2AC19
H2AC18
LRFN5
ABL2
ESR2
TBC1D14
TPCN2
CAMTA1
EMSY
TMUB2
ANKRD6
TFAP2A
ZNF296
GEMIN7
RBM22
FAM24B
RSPRY1
ARID3B
SHF
TSKS
AP2A1
PSIP1
ROR1
EPHB3
HES1
CHD6
FZD5
FXYD5
CCN3
UFD1
CDC45
NECTIN1
KCNIP4
NOTCH2
FUS
TRMT10C
FXYD7
CFLAR
ZNF565
KDM3A
HHIP
EPB41L1
KLF3
CSK
URGCP
IRAK1BP1
UBAP2
CCN2
PDE1B
REV3L
AASDH
C1QTNF7
CTBP2
SOAT1
DIDO1
FAM98A
AUH
NEUROG1
ST3GAL6
RTBDN
RAB15
SIX2
GID8
BTBD10
TRIM28
CCL26
GLDC
ZIC4
ERVH48-1
EYA1
TNS3
RARB
PHC2
CST1
SLC33A1
CXADR
NPSR1
ANXA2
MYCL
CLPB
ZBTB18
TMEM43
MVB12A
CHCHD4
PADI2
KIAA2012
TIAM1
NMNAT2
PRKAG2
PDIA4
NEDD9
TENM4
FAM20A
INSM1
FAM219A
DNAI1
ZNF600
TRPC4AP
SLAMF1
KANSL1L
VPS37B
ETV6
SLC3A2
ZNF674
SLC23A2
TFE3
ADGRL2
TSPAN14
ZNF649
SMIM14
PLAAT4
SLFN12
SYNDIG1
FOXO6
DPPA4
ZNF195
ZNF517
RPL8
SHANK2
KCNA4
NAA30
TCF4
BCL9
TEAD1
ATP6V1G1
ZNF664-RFLNA
ZNF664
SOX13
CCDC92
SUCO
TCP1
MRPL18
AGK
TSPAN13
RMND1
ARMT1
HNRNPA3
NTN5
COL4A2-AS2
MARCKS
ERMN
FAM227B
PXDC1
SOX4
NUAK2
ZNF875
B3GALT5
ZMAT2
INTS9
HMBOX1
ARL4D
TLE1
STOX2
URGCP-MRPS24
F11R
PLA2R1
CDH10
TUT1
MTA2
PCDHB5
SLC25A36
CHMP7
BCAT1
MAGEB2
LBP
AFAP1
NEUROG3
PGBD5
FAM107A
UHRF1BP1L
TAF13
MBD4
IFT122
CNOT11
ARHGAP42
WDR36
LRAT
KNTC1
SDK1
MSANTD4
CERCAM
RASSF8
BST2
FRY
NOTCH2NLB
NOTCH2NLA
ZP2
TJAP1
NBPF19
EIF4A2
SPHK1
MBNL1
MMP10
FAM153B
PDGFA
RNASE9
PKIG
TNRC6A
MTHFD1
TET3
ESX1
OPN5
HSF2
LRRC47
RIC8B
ABCC10
PSEN2
DISP3
VASH2
PDE4D
UAP1L1
SAPCD2
NBPF26
NBPF14
RAPGEF5
PARN
BFAR
FMN1
KLF6
TBC1D23
CNGA1
STMN1
MEIS2
TBC1D1
SFRP1
S100A16
NUP160
PDHA2
DUSP1
ZSCAN9
SLC16A13
SLC16A11
KRTAP3-2
ZNF552
MBNL3
PCYOX1
MPP2
PTPRB
MUS81
CFL1
TMEM132B
NKIRAS2
SELPLG
SPATA13
ABLIM1
RNF43
SLC2A8
RABGAP1L
MAP6
OSBPL1A
MEF2C
IFNE
BIN2
GALNT18
ZNF428
SRRM5
GUCY2C
TRIT1
ZNF285
GNA12
CRISPLD1
LGALS8
ACSL1
SH3GL3
SLC6A8
PNCK
INO80C
G3BP1
YIPF4
KHDRBS1
ZFP3
CSF2RB
BRINP2
ASTN1
ADGRD1
PDE4DIP
ZNF90
SPIRE1
CFAP20
PLPP3
DACT3
ITGA2
NXPH2
PINK1
NEK6
NXPH1
ENKUR
DEFB113
SORT1
APOBEC3G
ABCC2
NIPAL1
CCDC85A
CEBPZ
LIFR
FBXL14
MAGEA10-MAGEA5
MAGEA10
PIK3R3
ACOXL
BTBD11
SPATA22
UBR2
TOX3
FAM110D
GATA6
PRTG
SAV1
CPT1A
LRGUK
PTPRN2
GALNT10
ZXDC
YAF2
CD200
KRTAP3-1
TP53
SACM1L
RUNX1T1
DICER1
DNAJC7
PPAT
ZNF202
CELSR3
ARID5A
TNFRSF6B