ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX266861 | hESC HUES64
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◣ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

REST
SOX2
SPRED2
SMARCA2
TMPRSS11E
SERINC5
TCF7L1
CDX2
NFE2L3
TERF1
DHDDS
NTRK2
NR5A2
OTX2
GLRA1
CD82
ARHGEF38
VCAN
SMAD7
ITPRID1
SALL3
SFRP2
MOBP
SLTM
NAV2
TNNI3K
GLYATL1B
MFSD4B
SOX6
PRICKLE1
PLAGL1
METTL11B
CLDN9
CLDN6
DNMBP
SACS
GAS1
DUSP6
PIPOX
NXPH2
MAMDC2
ATP1A4
CADPS
SOX21
OBI1
SAMHD1
FOXI3
DPPA5
CACHD1
FAM222B
LEPROT
LEPR
LOC102724770
DGCR6
DEFB113
DEFB114
MUC1
TBC1D16
NRG1
GPRC5B
OR5AR1
TARS1
SNX16
SOCS3
LRRC10B
HESX1
ICMT
HES3
AGO1
CDC42EP3
MUC4
HMGB1
SERPINB3
GIMAP5
EBF2
NAA50
ATP6V1A
FOXA2
CHFR
GSX2
MED12
IL2RG
LIPK
RIPK1
PRSS48
RNASE6
EDDM3B
ANKRD1
TMEM70
LY96
NES
BDH1
PPP1R16A
FOXH1
PRDM14
SGMS2
CDH18
GAST
SMPD1
SMIM32
BCOR
FAM174B
TALDO1
MTF2
SCN5A
SLC39A8
PPBP
PF4
RPH3A
TRAPPC8
SSB
ATP8A2
HDAC9
SHCBP1L
MAD2L2
DRAXIN
PSIP1
URM1
FGF1
SHC1
FLAD1
CKS1B
BUB1
PALM2AKAP2
PPP1R16B
ADAM28
KCNA4
ZFHX3
NXPH1
GDF11
SLC7A5
ZNF483
GLI2
CNN3
GNAI1
BCL2L14
COMMD7
FOXD1
CACNA2D1
GBX2
FZD2
ACSL1
LRRN1
SRRM4
SGK1
CD200
LRRN3
MTHFD1L
GSN
TPH2
PHC1
MRPL20
BRINP2
ASTN1
RPL17-C18orf32
RPL17
TENT5B
MID1
PHF5A
ACO2
APBA2
LIX1
PIM2
CITED2
ZNF532
SAMD5
LRRTM4
IER5L
NRCAM
LARP1B
SOX14
DUX4
FBXL19
ARMH4
DMXL1
ZBTB8OS
RBBP4
TBC1D1
SHISA5
TREX1
AEBP2
GALNT3
FAT1
WLS
FAM227A
CBY1
RMND5B
ZNF608
MFHAS1
ZEB2
ZNF343
CER1
CSAD
ZNF740
C1orf100
ZNF304
KIFBP
TMEM170A
POU5F1
WDR49
BTBD3
HBG2
HBG1
PHLPP2
TIMP4
CARS1
SEMA6D
SHANK2
KAZN
COL17A1
MDN1
RFX4
RPL21
KIF21A
FAM180A
REV3L
TMEM30A
ATF4
MIEF1
DDX46
TFAP2A
FLVCR1
SPATA45
C9orf85
RCN1
FGF2
PGAP3
ERBB2
DACT1
ROR1
HHIP
GATA6
TRIB2
CDK2AP1
LDB2
CREB5
KDR
FGD4
ID3
NRXN1
CRH
SLC6A8
PNCK
ZDHHC14
FBXW11
ZNF436
BOD1L1
GPR85
RAD54B
FSBP
GAD2
BEND3
FIGNL2
KCNIP4
ID1
FBXL14
DHX32
LRRTM3
WDFY1
PAK1
ZSWIM3
ACOT8
HOXB1
PCDH1
FRAT2
BTG2
KIAA0895
FXYD5
FXYD7
MCF2L2
FBXO40
NRARP
FRG2C
WDR74
STX5
LFNG
MTRNR2L8
ZSCAN2
NDUFB5
MRPL47
RPGRIP1
APOBEC3F
GOLGA6D
CD99L2
MTRNR2L1
VENTX
UTF1
PTMA
MUC3A
IFRD1
ITGB8
SNRPN
TDGF1
LMCD1
LRRC2
MED25
FUZ
SMCO1
GRK6
ABHD17B
ETS1
DNMT3B
PLPP2
FRG2
NANOG
UGT1A6
KLHL7
RNASET2
NOTCH1
SCGB3A2
ARID2
DDX17
KRT31
ETV1
ABHD11
LZTS1
RASGRF2
PMEPA1
CBFA2T2
HSCB
CHEK2
ZNF398
TRIM2
NADK
CELF3
ENSA
FGD3
ZNF775
RIIAD1
DDX43
KIF5C
HOPX
BCL2L1
FGFR2
WFDC8
PSMD9
HPD
ETV4
COL23A1
GOLGA6B
CCDC200
NCDN
KIAA0319L
SALL4
ART1
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
FZR1
RPS24
GNAI2
CELF4
STON1-GTF2A1L
LHPP
CYP1A1
TEKT3
DAGLB
TRIM48
USP44
GADD45G
ZNF18
MYSM1
TRIM24
FAM120B
CDC14B
FZD8
SYBU
LCA5
LIN28B
FBP1
PRKG1
FOXP4
C1orf127
MTRNR2L2
MSH3
DHFR
KMT2B
GOLGA6C
PARP1
PTBP2
LIMCH1
ZCCHC3
C20orf96
MKRN1
SNURF
GCNT2
TESK2
CYP2S1
IL34
TMEM63A
SLA2
RIF1
SOX5
PSMG3
PUF60
ZBTB40
FOXP1
ESRP1
TMCC1
LINGO1
PBX2
GPSM3
MCCC1
LEFTY1
CYTH2
RNF220
TRIP4
PCLAF
PER2
MRS2
NFE2L1
DLL1
MMACHC
SGPP2
WDR55
DND1
ECE1
HOXD11
IQCH
AAGAB
MACROH2A1
PYGB
SLC35A5
ATG3
TMEM41B
AMN1
SIPA1L2
RASA1
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
NLRP12
SLC2A14
SPIC
NOTCH2NLC
SNAPC3
ITGB3
SORBS2
ZFC3H1
THAP2
P2RY12
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
ITPRIP
DDR1
GJA1
MBNL2
SMAD3
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
CCT2
EOMES
SCAF4
TMC5
H3C15
H3C14
DNTT
ALDH1A2
SPRY4
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
PRR15
THOC3
GABRB3
UNC13B
FOXB1
VOPP1
ST18
POSTN
CRYAA2
CRYAA
PDCL
MORF4L2
TUBB
MDC1
DPH6
DUSP29
WBP1L
OR5K3
SASH1
CEP41
DGLUCY
ECT2
EAPP
CPA2
PCBP1
TGIF2-RAB5IF
TGIF2
SH3GL1
CHAF1A
NDUFS5
AASS
SH3BP4
BFSP1
FAM200B
ANAPC4
ONECUT2
LIN28A
CTNNA1
MLEC
LRRTM2
UQCRHL
SULT6B1
NRROS
KCNN2
TGIF1
MTM1
ASXL3
CDYL
KNDC1
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
MANBAL
CA6
SEPTIN5
CAPRIN1
SIN3A
PSORS1C2
FEZF2
PIN4
L1TD1
TCF7L2
VWCE
TES
SMYD2
SRCIN1
WDFY2
EXT1
BICD1
HMOX1
TMPO
GABRQ
ZSCAN10
LIMK2
GPR31
IGFL3
KLF5
CARHSP1
NEBL
SRSF7
PPEF2
OLFML3
MOG
LMNA
IFT80
RTN4
GET3
ATXN3
ADA2
TNRC18
LOC100129484
ACVR1
ARIH1
AK4
ZBTB45
TIAM2
PHRF1
FGF12
SCARB1
NDUFV1
WEE1
KDM2A
TRPM1
PEAK1
HMG20A
CCDC130
NBPF15
GCSAM
TJP2
SLC36A2
PSME3IP1
MAST4
PRRC2B
STK31
ZNF781
ABO
UGT1A7
SERPINA1
KLHL3
ISOC2
TTYH1
USP7
SLC20A2
PRODH
LOC102724788
SENP2
NDST1
KLHL6
DSP
INO80D
WDHD1
SOCS4
PCNX2
SYN3
IL17RD
SLC46A1
PALLD
SEPTIN9
CCDC9
RASAL2
LRIG1
DST
AHCYL2
ANK2
LYPD6B
DENR
VIM
UBQLN4
RAB25
PLSCR4
LAMTOR2
DUSP12
SPIN1
C10orf95
NDUFAB1
CCAR2
C8orf58
GTF2I
TPST2
ERG
TNC
KIF6
SMN2
SMN1
PYCR2
ANKRD35
DDX3X
CUEDC1
PGPEP1
MFSD13A
RBFOX2
PPP2R3A
PNRC1
GMCL2
PLEKHG1
CAPN3
SNX19
TMEM167B
TACC2
CHN2
KCNJ1
PHAX
ALDH7A1
ZNF34
RGS3
SEC22B
EFNB2
NRBP2
SLC66A2
DOK7
SOCS5
SINHCAF
CHRNA1
UNK
H3-3B
PACSIN2
AKIRIN2
KLF7
PTAR1
ZNF536
NUAK1
STRA6
PXMP4
GCNT1
TNFSF8
TTC13
ARV1
KCNMB4
PITPNM2
PARP16
HSBP1L1
MT1HL1
KRT8
OAZ2
ABCB5
SLC34A1
PFN3
MAST1
ADAR
LEMD2
TMEM47
VANGL2
DET1
APELA
H2AC19
H2AC18
LRFN5
ABL2
ESR2
TBC1D14
TPCN2
CAMTA1
EMSY
TMUB2
ANKRD6
ZNF296
GEMIN7
RBM22
FAM24B
RSPRY1
ARID3B
SHF
TSKS
AP2A1
EPHB3
HES1
CHD6
FZD5
CCN3
UFD1
CDC45
NECTIN1
NOTCH2
FUS
TRMT10C
CFLAR
FYN
ZNF565
KDM3A
EPB41L1
KLF3
CSK
URGCP
IRAK1BP1
UBAP2
CCN2
PDE1B
AASDH
C1QTNF7
CTBP2
SOAT1
DIDO1
FAM98A
AUH
NEUROG1
ST3GAL6
RTBDN
RAB15
SIX2
GID8
BTBD10
TRIM28
CCL26
GLDC
ZIC4
ERVH48-1
EYA1
TNS3
RARB
PHC2
CST1
SLC33A1
CXADR
NPSR1
ANXA2
MYCL
CLPB
ZBTB18
TMEM43
MVB12A
CHCHD4
PADI2
KIAA2012
TIAM1
NMNAT2
PRKAG2
PDIA4
NEDD9
TENM4
FAM20A
INSM1
FAM219A
DNAI1
ZNF600
TRPC4AP
SLAMF1
KANSL1L
VPS37B
ETV6
SLC3A2
ZNF674
SLC23A2
TFE3
ADGRL2
TSPAN14
ZNF649
SMIM14
PLAAT4
SLFN12
SYNDIG1
FOXO6
ATXN7
DPPA4
ZNF195
ZNF517
RPL8
NAA30
TCF4
BCL9
TEAD1
ATP6V1G1
ZNF664-RFLNA
ZNF664
SOX13
CCDC92
SUCO
TCP1
MRPL18
AGK
TSPAN13
RMND1
ARMT1
HNRNPA3
NTN5
COL4A2-AS2
MARCKS
ERMN
FAM227B
PXDC1
SOX4
NUAK2
ZNF875
B3GALT5
ZMAT2
INTS9
HMBOX1
ARL4D
TLE1
STOX2
URGCP-MRPS24
F11R
PLA2R1
CDH10
TUT1
MTA2
PCDHB5
SLC25A36
CHMP7
BCAT1
MAGEB2
LBP
AFAP1
NEUROG3
PGBD5
FAM107A
UHRF1BP1L
TAF13
MBD4
IFT122
CNOT11
ARHGAP42
WDR36
LRAT
KNTC1
SDK1
MSANTD4
CERCAM
RASSF8
BST2
FRY
NOTCH2NLB
NOTCH2NLA
ZP2
TJAP1
NBPF19
EIF4A2
SPHK1
MBNL1
MMP10
FAM153B
PDGFA
RNASE9
PKIG
TNRC6A
MTHFD1
TET3
ESX1
OPN5
HSF2
LRRC47
RIC8B
ABCC10
PSEN2
DISP3
VASH2
PDE4D
UAP1L1
SAPCD2
NBPF26
NBPF14
RAPGEF5
PARN
BFAR
FMN1
KLF6
TBC1D23
CNGA1
STMN1
MEIS2
SFRP1
S100A16
NUP160
PDHA2
DUSP1
ZSCAN9
SLC16A13
SLC16A11
KRTAP3-2
ZNF552
MBNL3
PCYOX1
MPP2
PTPRB
MUS81
CFL1
TMEM132B
NKIRAS2
PGK1
SELPLG
SPATA13
ABLIM1
RNF43
SLC2A8
RABGAP1L
MAP6
OSBPL1A
MEF2C
IFNE
BIN2
GALNT18
ZNF428
SRRM5
GUCY2C
TRIT1
ZNF285
GNA12
CRISPLD1
LGALS8
SH3GL3
INO80C
G3BP1
YIPF4
KHDRBS1
ZFP3
CSF2RB
ADGRD1
PDE4DIP
ZNF90
SPIRE1
CFAP20
PLPP3
DACT3
ITGA2
PINK1
NEK6
ENKUR
SORT1
APOBEC3G
ABCC2
NIPAL1
CCDC85A
CEBPZ
LIFR
MAGEA10-MAGEA5
MAGEA10
PIK3R3
ACOXL
BTBD11
SPATA22
UBR2
TOX3
FAM110D
PRTG
SAV1
CPT1A