ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX512370 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◣ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NR5A2
NES
SMAD7
CDX2
TARS1
MAMDC2
BCOR
SOX6
PIPOX
FGF1
MTF2
PPBP
PF4
PIM2
SMARCA2
SACS
SPRED2
SOX21
MUC1
NAV2
ANKRD1
SRRM4
GDF11
CD99L2
TERF1
APOBEC3F
SOX2
LZTS1
DNMBP
LFNG
FLVCR1
SPATA45
LRRN3
GAST
GLYATL1B
NFE2L3
LDB2
OTX2
EYA1
ADAM28
CD82
DUSP6
VENTX
UTF1
IER5L
NRARP
SGK1
NTRK2
APOBEC3D
APOBEC3C
TEKT3
ARHGEF38
ID3
ETS1
TGIF2-RAB5IF
TGIF2
NDUFB5
MRPL47
CREB5
ZNF532
PLAGL1
RMND5B
NANOG
SLC36A2
BDH1
CADPS
CLDN9
CLDN6
OBI1
HMGB1
FAM227A
CBY1
PRICKLE1
GOLGA6D
SHC1
FLAD1
CKS1B
NFE2L1
TFE3
ABHD11
REST
SLTM
FBXO40
CARHSP1
AHCYL2
MUC4
MRPL20
POU5F1
GOLGA6A
FBP1
RPGRIP1
FOXD1
TENT5B
NADK
ITPRID1
KDR
GLI2
RPH3A
DPPA5
GSAP
GSX2
CBFA2T2
ATG10
RAB17
KCNJ1
GNAI2
KIFBP
TMPRSS11E
CAPZB
SSB
ZFHX3
PSMD9
HPD
GPRC5B
NAA50
ATP6V1A
POU3F4
SAMHD1
METTL11B
LRRC10B
CACHD1
CNMD
SNRPN
RNF220
TCF7L1
RIPK1
PRSS48
DDX17
COMMD7
PSMG3
URM1
NCDN
KIAA0319L
AGO1
GAS1
ZIC3
BUB1
SPIN1
SGMS2
VCAN
PRAC2
PRAC1
HOXB13
SCGB3A2
RNASE6
EDDM3B
USP44
CBX8
NRG1
ATP1A4
ZCCHC3
C20orf96
TFAP2A
MID1
MED25
FUZ
TALDO1
CHFR
SULT6B1
TMEM70
LY96
FAM180A
DOK7
MDN1
SMPD1
ESX1
SIX3
GOLGA6C
PRKG1
ZNF398
SHCBP1L
OLFML3
POSTN
GJA1
MAD2L2
DRAXIN
ICMT
HES3
FGD4
DDX43
HESX1
SFRP2
GBX2
LINGO1
SLC2A14
PARP1
FOXA2
UBD
AASS
FOXI3
AFF1
CSAD
ZNF740
GOLGA6B
BRINP2
ASTN1
WDFY1
SEPTIN5
CITED2
HDAC9
VOPP1
RPS24
DEFB113
DEFB114
TLE1
SLC7A5
PLPP2
TDGF1
LRRC2
TMEM47
DMXL1
PPP2R3A
DCAF4L1
SLC30A9
LRRTM3
SGPP2
NLRP12
ATP8A2
HOXD11
HOXD13
HOXD12
GET3
GIMAP5
RNASET2
MBD4
IFT122
OR5AR1
MRS2
PHC1
ETV4
PGBD5
PPP1R16A
FOXH1
SHISA5
TREX1
RASGRF2
LHPP
CACNG8
ZNF608
DHDDS
DAGLB
SMN2
SMN1
LMCD1
GADD45G
SNURF
PDCL
ZNF536
MAGEB2
DUSP29
GUCY2C
DIDO1
GID8
TUBB2A
ZNF343
EBF2
SLFN12
AGK
TNRC6A
DPH6
FAM120B
DLL1
ZNF483
IFRD1
TMEM30A
KIF21A
HOXB1
LIPK
ST18
LRRN1
ARHGAP21
GABRB3
SALL3
MYSM1
PDPN
PMEPA1
CACNA2D1
RARG
ITGB7
TRIM24
ZFC3H1
THAP2
PHETA2
NAGA
PHLPP2
BTG2
LRRTM4
SOCS3
SMC6
GEN1
SMYD2
DDX46
TMEM63A
LEFTY1
OBSL1
INHA
PTMA
HSCB
CHEK2
RFX4
ALDH1A2
FAM222B
OR5F1
ZXDC
TMEM170A
AASDH
OR5K3
PARN
BFAR
FRAT2
AJAP1
ARF6
ADGRL2
RNASE9
SMIM14
SUCO
C9orf85
ABHD17B
STN1
SRMS
FNDC11
FAM20A
PRPS1
ARHGAP42
SLC35A5
ATG3
SORBS2
GAD2
GNAI1
TIMP4
CLEC5A
RASA1
TRIML2
DDX3X
KIAA0895
PLA2R1
ZBTB8OS
RBBP4
CYP2S1
PITX2
WDHD1
SOCS4
SEPTIN9
IRAK1BP1
ATXN3
SCAF4
CCDC169-SOHLH2
CCDC169
FBXL19
FGF2
GPM6B
LHX2
ZSCAN2
XK
ITGB8
SERPINA1
GRK6
FAR2
L1TD1
USP7
ZNF565
PILRA
RIC8B
APBA2
NOTCH1
TMEM132B
WDR49
SMAD3
MOG
GPR85
ZNF202
PYGM
ZNF781
CER1
COL17A1
NDUFV1
PXMP4
FIGNL2
AEBP2
ZBTB40
LEPROT
LEPR
OLFML2A
NR6A1
PLEKHG5
FGFR2
SOX5
TLCD1
RPL23A
RAB34
PROCA1
CDH10
OSTM1
P2RY12
FHL1
ZNF484
SIN3A
EXOC7
PALLD
PACSIN2
ZNF428
SRRM5
WNT5B
MAPK1IP1L
CLPB
ESRP1
BUB1B
CHMP7
ONECUT2
KCNA4
GNPTAB
MTHFD1L
UGT1A4
DUSP8
UGT1A3
GCNT2
PBX2
GPSM3
SERINC5
KNDC1
PCBP1
SLAMF1
TOMM40
CHD6
MFSD4B
DLX5
FAM174B
ATF4
MIEF1
TEAD1
ZNF75D
ETDC
ZSWIM3
ACOT8
HOPX
PTBP2
BCL2L1
ZNF304
KDELR1
GRIN2D
FOXP4
RTP4
HOXD1
MOBP
CCBE1
CSNK1E
MFHAS1
HES5
PANK4
SHANK2
CRH
SLC46A1
FZD8
NXPH1
FOXB1
TUBB
MDC1
PHF5A
ACO2
ATP6V1G1
LBP
SOX14
KCNN2
GLIPR2
ARAP3
CDH18
HMOX1
HGS
ARL16
TRIM13
DLST
MECOM
TREM2
CAPZA2
SFXN1
CLEC6A
LIN28B
CAV3
CDKL5
KCNMB4
CCDC27
DUX4
KLRC1
FRMD4B
TCAF1
HEY2
FAM153B
RTN4
CD200
TJP2
DMRT1
WDR74
STX5
TESK2
MMACHC
PPP1R3B
G6PC2
CSF2RB
ZAP70
KLHL7
IL34
GPR31
CELSR3
ID1
FBXW11
RHOBTB2
TRAPPC8
TCF7L2
POLL
DPCD
PLPP3
STON1-GTF2A1L
KDM2B
GRHL2
ZNF677
VN1R2
MBNL2
APELA
PCNX2
RPSA
IQCH
AAGAB
GALNT3
RAX
NXPH2
DNTT
EBF3
VAX2
FUBP1
DNAJB4
KXD1
ARID2
PALM2AKAP2
IGFL3
ZFP3
CHRNA1
PDHA2
CHCHD3
SYN3
RGS3
MAST1
FZD5
RTBDN
FERMT1
KRT13
SNAPC3
PDZK1IP1
TPST2
GRID2
IFNE
GTF2I
EPHB3
LITAF
FZR1
EPB41L1
TP53
WRAP53
ANKRD40
SLC10A2
LUC7L3
SLC39A8
DUSP12
ARSD
TBC1D1
PRDM14
GFPT2
LAPTM4B
HECW1
TRIM2
ACSL6
MUC3A
MACROH2A1
CAPN3
SOAT1
CSRP2
PRICKLE2
MED12
IL2RG
TOX
CCDC88C
TRIB2
NMNAT3
ENSA
A2ML1
SLC25A36
AKR1D1
RBP3
MYH15
TBC1D16
KAZN
ARHGEF19
GHRH
KCNMB2
MTRNR2L8
FGD3
HBG2
HBG1
FUS
ARF4
DDX59
C1R
PUF60
NRBP2
PTCH1
CERCAM
TSGA10IP
CANX
NBPF15
GCSAM
MCF2L2
PI4K2A
ETS2
MTRNR2L1
TIAL1
GABRQ
NCOA7
TUT1
MTA2
CDKN1A
GSPT2
MSC
CST1
COBL
ARID5A
ZSCAN10
TMUB2
TRMT10C
TAL1
GDF3
ATXN7
THOC7
MKRN1
HIP1
ZNF101
ATP13A1
SRPK1
FYN
CEBPZ
TSNAXIP1
RANBP10
SUPT20HL1
ARID3B
HSD17B4
ZNF296
GEMIN7
CCDC85A
IL1RAPL1
CELF4
ESR1
PSORS1C2
DET1
NOXRED1
SMIM5
SMIM6
PTAR1
STOX2
LONRF3
NFE2
ACADM
BARHL1
MAPK8IP3
SAMD5
RBPMS
MAP3K3
VMO1
PSMB6
GLTPD2
ZEB2
FAT1
TRIM38
TFAP2B
HSPA13
ENOX2
NDUFAB1
GLB1L3
FAM200B
DCAF4L2
SCN5A
EXOC5
AP5M1
FABP6
LRAT
DHX32
MTM1
SLC66A2
HSBP1L1
PSIP1
LRRC47
WDR44
CELF3
RIIAD1
FAM227B
BBC3
MEIS2
ZSCAN9
USP53
PAK3
UBQLN4
RAB25
LAMTOR2
INO80C
SYAP1
CTPS2
SALL4
ISL1
TRMT2A
RANBP1
GOLGB1
MSI2
TMEM87A
GANC
FILIP1L
GARS1
SLC38A3
C7orf57
ASPA
SUN3
ZNF600
PDGFA
VIM
ZNF674
CTBS
SMCO1
SRSF7
FTCDNL1
BTBD10
ZNF875
PRUNE2
HLA-A
ZNF34
ZNF517
RPL8
SCD5
SMIM32
THEM4
KMT2B
RMND1
ARMT1
RAB30
ZC3H12B
BEND3
CCDC9
NFIB
ZNF121
CYP2B6
TTYH1
SLC16A13
SLC16A11
F11
NRROS
C10orf95
MFSD13A
LIMCH1
LRGUK
BCL2L14
UBOX5
FASTKD5
CAPRIN1
FAM151B
OR13A1
KCNMB1
RIPK4
AMN1
PEAK1
HMG20A
LRRC20
PCDHB5
PRDM16
NOSTRIN
MCTP2
RHEX
TMC5
CDX4
EIF1AX
TC2N
ZNF814
GID4
ATPAF2
CLTCL1
ANK2
CYTH2
UGP2
ARHGEF10L
ST3GAL6
ZNF649
BORCS6
ALDH1L2
CCDC124
SDK1
ZDHHC1
FHIT
PTPRN
PPP2R2B
HS6ST1
TRIM71
PROCR
NTN1
ROR1
CTSF
OR6C76
CAPN1
SLC24A2
SPIC
FADS3
QSER1
PANX1
RIF1
ST6GAL1
GSG1
CFAP298-TCP10L
CFAP298
ALPP
PPP1R16B
LAMTOR1
ANAPC15
UQCRC1
PLAAT4
SFPQ
PHOX2B
CYP1A1
EOMES
TTC13
ARV1
ABCB5
TRAK2
STRADB
ZNF138
ZNF518B
COL12A1
ARHGEF6
JPT1
SRCIN1
ZNF77
ENKUR
NEPRO
PGAP3
ERBB2
GPATCH8
PTPN2
MEIS3
CDH11
CDC14B
SPRY4
NKX1-2
NPAS3
HABP2
FEM1A
RBFOX2
PDIA4
UAP1L1
SAPCD2
GRIK4
WFDC1
SNX19
CARS1
LPCAT1
ETV6
IP6K2
EPHB6
PREX2
DACT3
SKIDA1
BICD1
SLC33A1
VPS37B
DNMT3B
C1orf127
FAM110D
RPL24
KLRB1
ERMN
CFAP20
MTHFD1
FOXN3
RAPGEF1
CDK17
CGNL1
TNFRSF11A
STK32C
LRRC27
GNA12
SLC6A8
PNCK
BHLHE22
TAFA1
PRKAG2
SACM1L
PPAT
JMJD1C
IL22RA2
PAICS
NR2F2
NRXN1
EXT1
FAM24B
EXOSC9
MTMR9
PAN2
IL23A
LANCL3
RPA2
GUCA1A
CLCF1
CRLF2
TOP2A
EPHA4
APC2
TRPC4AP
CDH9
ZNF436
HOXA1
FOXP1
MLN
GADD45A
DPYSL3
MLLT10
JADE1
PIN4
MSANTD4
RNGTT
ARID1B
AIG1
INO80D
HECTD4
GLDC
CDK6
MSANTD1
FXYD5
FXYD7
ZBTB39
TAC3
STRA6
ANKRD6
KLF3
TBL1XR1
E2F7
SASH1
ZNF770
BMP2
ZBTB45
TRIM28
TOX3
TEAD4
PBX1
FOXO1
RNF31
PSME2
EMC9
PSME1
ADAMTS1
ZNF729
LEKR1
HNRNPA3
TKT
SIPA1L2
ZIC4
OPN5
AKIRIN1
ZIC1
COL6A1
BMPER
LCA5
CCAR2
C8orf58
GMCL2
SDHD
SLC24A3
ACVR1
KIF3C
NKX2-8
NOL3
KIAA0895L
EXOC3L1
E2F4
TSPEAR
CDX1
KRTAP10-12
SCRG1
GCNT1
ARSL
SVOPL
CACNB2
ADGRG7
CDIP1
MT1HL1
ZIC2
LMX1A
CPB1
CEP41
DPPA2
SPRED1
LCP2
FAM236B
FAM236A
CPA2
CLEC2L
LEF1
SP8
GCLC
RTL8C