ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

FRG2C
TNFRSF6B
NRARP
MUC1
FRG2
RPEL1
DUX4
BTNL9
ARL4D
DRD4
TMEM242
FAM227A
CBY1
MTF2
COL23A1
GALR1
PIRT
MMP8
SPATC1L
CCDC200
PDE4DIP
ZNF285
CBWD5
MTRNR2L1
CGRRF1
CYP4F11
CBWD3
CBWD6
FAM153B
SEC22B
NOTCH2NLC
EEF1A1
NOTCH2NLB
NOTCH2NLA
ZFAND3
COL6A2
C12orf50
C12orf29
NUDT4B
NUDT4
FAM240C
SOX2
PRDM4
C6orf89
PPIL1
HGC6.3
CXCL3
NUDCD1
POLR2K
SPAG1
TTC12
ZNF718
ZNF595
WDHD1
SOCS4
ELMOD2
ARHGAP39
ADGRB3
SAYSD1
GNPTAB
SRPK1
NBPF1
TMEM14B
RGS19
OPRL1
LKAAEAR1
PERM1
BIRC2
NPDC1
ENTPD2
MOCS1
EBAG9
KRCC1
TMEM217
TBC1D22B
PPARD
NTS
RBM19
TMEM71
PHF20L1
POLR2J3
MSRB2
EMC2
GPAM
MTMR2
NBPF15
RTRAF
LMBRD1
TFAP2A
ATL1
STARD4
FANCL
MAP4K5
SART1
ZSCAN30
WASHC4
NUF2
ZNF322
MTCH1
PCMTD2
AARD
DENR
IRF2BP2
HCFC2
GLT8D2
PSMB8
TAP2
TRPS1
FBXO43
TMEM260
ARL14EP
DAB1
OMA1
MIER1
DNAI4
LYSMD3
PPP1R12A
ZNF330
SH3TC2
ZNF451
HIVEP1
FANK1
DDX10
FANCE
THAP9
SEC31A
ZNF311
GPR89A
TMEM30A
ANKRD46
FDXACB1
C11orf1
ALG9
SPATA33
PSMD6
ATG14
CYP2E1
ZSCAN31
GAGE2A
GAGE12H
GAGE12E
GAGE12D
GAGE12C
TNFRSF11B
COLEC10
CDC7
SECISBP2
CKS2
MTHFD2L
MNAT1
CHST10
KIAA1586
COMMD10
TCF7L2
SUPV3L1
TBC1D7-LOC100130357
TBC1D7
FILIP1L
EXOC5
AP5M1
HLA-DRB1
LYRM9
TTC29
GMNC
GALC
NOTCH2
FRMD4B
CMTR1
UTP20
SLC35B3
SNRNP48
FAM200B
PLA2G6
PIK3CA
CLEC12A
ZC2HC1C
ACYP1
CNIH1
JRKL
CCDC82
NRAS
ACYP2
SESN3
COL21A1
TTC17
DHX35
ATG10
ZNF391
MGAT4C
PLEKHH2
KDM4D
CWC15
SCFD1
DDX1
NAF1
STK38
SEC62
CR2
NAT10
ZNF202
DLG2
EFHC1
UTP23
TMEM126B
SMARCA5
LRRCC1
SERF1B
SERF1A
C12orf75
ZNF76
ARFGEF2
SIK2
ANKRD18B
LMCD1
SPATA7
LRRC1
PCTP
KRTAP4-8
KRTAP4-9
PRMT2
HMGCS1
NAPG
FDX1
KRTAP3-2
UBR2
MECOM
FRA10AC1
KRT40
TEX9
GORAB
RPP30
GLRA3
MMUT
CENPQ
KRTAP3-3
CTTNBP2NL
NOXRED1
ZNF184
H4C2
MRPL27
EME1
H3C2
H2AC4
MFAP3
FAM114A2
SLC35C2
DCAF4L1
SLC30A9
SLC26A8
MAPK14
TRIM44
PAK1IP1
C6orf52
FBXL5
GFPT1
COMMD8
DPH5
RPUSD4
FAM118B
HSD17B12
NEDD1
SMC6
GEN1
CCDC167
TAF4B
LHX9
RNF38
RNF103
C1orf53
ZBED8
OSER1
RLF
NIPSNAP3A
MTERF2
CPQ
AFF1
RNF19A
CCDC88A
DNMT1
CD83
RABGGTB
PTGS2
RABEP1
SPATA3
GOSR2
OXR1
UBE2D1
SCN11A
PRKN
PACRG
WDR48
OXNAD1
DPH3
CRADD
FBXO48
APLF
FRMD6
GTF2H1
HPS5
RTKN2
NME6
ISOC1
SNX13
COPRS
ZFP69B
ADGRA1
HACL1
BTD
EPN1
MED20
BYSL
LSM6
MLH3
TTC32
ACTR5
KIAA1109
GRPEL2
ERMARD
VSTM5
RNF8
EXT1
USP53
PTP4A1
PAQR3
KIF2A
DSN1
MTREX
DHX29
SCYL2
DEPDC4
CCN3
PGBD2
OARD1
NFYA
TMC1
ELAPOR2
MAML2
GBE1
SRGAP2
PRRC1
TEX10
PXT1
KCTD20
KIFAP3
KRT10
GMNN
HLA-G
MAPRE2
CAST
BAG2
MAPKAP1
STX7
CEP126
ANGPTL5
ATXN7
TP53RK
PANX1
H1-7
CLASP2
ZSCAN16
RBM7
C11orf71
IL15
SHPRH
SLC13A3
FERMT2
UFL1
SGCB
EXOSC9
BOD1
FLT4
MOCS2
SNX2
RPL7
RDH10
NDST3
EEF1E1
SUPT3H
CCDC30
SARS1
MED23
GMFB
KRTAP2-4
KRTAP2-3
METTL15
KIF18A
RPE
KRTAP2-2
SRSF11
MINPP1
PTGFR
SCLT1
C4orf33
MAST4
SRP9
H2BC17
H2AC17
SRBD1
H3C12
CENPC
SNRPB2
ECI2
REXO2
KIF5B
CRY2
RAB4A
PKIG
SERINC3
CEP120
FAM91A1
PRKCI
ACBD6
TOMM34
STK4
ZSCAN9
CEP135
TDP2
ACOT13
GPSM2
TCAIM
TCERG1
STAMBP
OPN3
CHML
TOMM20L
UQCRFS1
NAA30
FZD6
MYO1B
BMS1
CLK4
TMF1
C6orf226
DNAJC19
SNRPF
AP3B1
PPFIA4
KCTD8
DEPDC1
ZCCHC4
MRPL42
EDEM2
FARSB
SYCP2
FAM217B
PHLDA1
L2HGDH
DMAC2L
RPP21
PPP1R3D
TECPR2
CINP
P3H2
DEF6
DPY19L3
NOL10
OAZ2
SCGB1C2
SCGB1C1
ODF3
CSNK2A1
GPR89B
RNLS
LIPJ
C10orf88
MITF
SDHAF4
ZPR1
APOA5
STX17
AKIRIN1
POFUT1
PLAGL2
TPR
ODR4
ANTXR2
LRRC37A3
TEFM
FIP1L1
CC2D2B
BCL10
MYLIP
CCDC86
PARVA
KCNN2
DST
SUCO
PACRGL
SC5D
MTBP
MRPL13
EPM2A
MKRN2OS
TMEM154
MKRN2
RDH5
PIP4P2
UQCRB
BBS12
SUCLG2
CHMP2B
BLOC1S1
CCNH
NDUFAF2
ERCC8
ZNF691
ITGA7
SERPINB7
GTSF1
ADGB
LEMD2
INO80C
CSRP2
SIPA1L1
MAPK8
MAPK1IP1L
AMACR
CFAP58
VPS54
C18orf21
IFT57
RCBTB2
VAMP3
STN1
PAG1
MOCS3
DPM1
PDCD6IP
CDKL1
CEP295
B4GALT5
GCH1
SYBU
H4C9
H2BC11
H2AC11
RFX3
SEL1L
VPS8
CDCA7L
MFSD2A
SLC25A46
AMZ2
PABPC4L
DCAF8
FAM151B
SLC25A27
CYP39A1
TMTC3
CEP290
PAQR8
ZNF35
CRY1
MRPL2
KLC4
CUL7
IQSEC3
USP17L21
USP17L20
USP17L12
TBC1D5
USP17L22
EIF2S1
ATP6V1D
MCUR1
HTATIP2
OGFRL1
MTOR
METAP2
KRTAP9-9
RNF180
KRTAP9-3
KRTAP9-2
DPH6
CHD6
FOCAD
TCP11
STX18
EXPH5
TMEM14A
LRRC6
DUSP15
NCEH1
CLDN1
MMS22L
AMER3
TWF1
ZSCAN23
SS18
TFAM
TTLL9
DCUN1D5
CUL1
NCSTN
COPA
GXYLT2
FAM174A
FIGN
RAD21
USP49
RCHY1
LNPEP
DCK
MED30
RAB33B
ZNF829
ZNF568
CD302
KHDC1
MSANTD4
TNFAIP8
PRKAR1A
FOXO3B
PPP1R11
POLR1H
IDI1
WDR37
BPHL
EPS15L1
OTUD6B
SPTLC1
NUP54
ST7L
CAPZA1
MRE11
ANKRD49
RALGAPB
PRPF38B
MED10
TESK2
MMACHC
UNC13B
SCARB1
TOP1
RPP14
HTD2
E2F6
GOLGA5
DISP1
ANKS1B
NBAS
RAB28
ERMAP
DYNC2H1
EFR3A
FAM102B
NDUFV2
ZFPM2
SVBP
LCORL
DET1
ANGEL1
H3C13
H2BC18
APPL2
DDHD1
C6orf118
RNASE4
ANG
NAP1L1
MAL2
DEK
ALKBH3
TICAM2
NEK11
HMGCLL1
CRBN
NFRKB
PRMT6
ASTE1
HMGB1
LRP12
INPP4B
USPL1
NCOA5
PHF3
TTLL7
TMEM263
MMAA
ANTXR1
BTBD9
PLPP1
GAGE2B
TMED8
SAMD15
POMP
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
GAGE12I
THOC3
PSMG2
E2F7
PELI1
OAZ3
VRK2
MAEL
ILDR2
CEP76
PNPLA8
KAT7
UTS2B
CCDC50
CCNG1
UHRF1BP1
SH3GLB1
SEC13
TRMT5
SLC38A6
PLRG1
TMEM45A
SLC25A4
PPWD1
CENPK
ALMS1
FYB1
GABRB3
RASAL2
ZBTB18
ARID5B
CCDC171
ETFDH
C4orf46
RGL1
TMEM17
NME7
BLZF1
CXCL2
USP6NL
MYL12A
SRGAP2B
TIGD6
HMGXB3
DNAH6
PTPDC1
MYL12B
ZKSCAN8
PPP1R42
GNG12
OXSM
NGLY1
PELI2
PTS
LOC100287896
LIPT2
RBM12
CPNE1
L3HYPDH
JKAMP
SLC4A4
DEFB121
STPG2
SPAG16
ATP10D
PRKCH
RFX6
OR6B1
MYH4
DAZ4
DAZ3
PHTF1
PAFAH2
VCPKMT
FAM3C
NTAQ1
ACADM
ALG8
SMC5
DPYD
ARG2
ITPR1
CHMP4C
ATAD2B
LRRC39
KIF6
RIC8B
PGAP3
ERBB2
NPL
USP30
NREP
ZNF124
SVOP
ERAP1
SMAP2
SAMD12
TCTN2
TIMM23B
PARG
BTN3A1
NFYB
RFESD
DUSP12
EIF1B
ATP5F1E
COX10
TMX1
RPL22L1
MKLN1
CDC73
TTC4
SNRK
DR1
PIGF
CRIPT
TTC33
IFT81
TRIM3
TIMM10B
ZNF133
COQ2
FBXO4
ZSCAN26
ZKSCAN4
NKAPL
CFAP43
BDP1
IQCH
AAGAB
NUP160
SAV1
H4C11
VPS37A
CNOT7
NUDCD2
HMMR
SLC41A2
H2BC14
H2AC14
CNPY3
NBN
H3C10
H2BC13
H2AC13
BNIP3L
EIF2D
USP47
GOLGA6L4
LONRF2
ATP6V1C1
MSMP
CTNNB1
H2BC4
H2AC6
ZNF491
LGALS3
ASCC3
ZW10
CLDN25
RGP1
GBA2
VPS37B
ALDH2
PPME1
C2CD3
PPP1R21
LRRC8B
DGUOK
GNL2
TRIM60
SDC4
CSE1L
SH3RF2
ARPC5
ARL6
GLO1
ELMO2
AGBL3
GPATCH2L
UBA6
RAB35
SNF8
RNF2
PIN4
ROR1
RAD18
PRICKLE2
CTSC
PCLO
C12orf73
TDG
MIA3
ITIH1
CTXN2
MYEF2
MSMO1
CCDC15
SELENOK
ACTR8
RWDD1
ANKRD17
APTX
DNAJA1
METTL25
CCDC59
CMTR2
MIPOL1
UBXN2B
NEK4
UGGT2
CEP83
SMCO4
SMIM15
SNX7
PSMD9
HPD
JPT1
BOD1L1
IKZF5
ACADSB
LRRFIP2
ING3
ANKRD50
COX18
CHMP3
SCAND1
NDUFAF4
KLHL32
EPB41
RNF141
ZNF596
MAK
NEK7
RANBP17
EML5
NEGR1
EBPL
SNAPIN
KDM3A
HSF2
ARHGAP19
CDK17
LRRC74A
RRP36
MEA1
TNPO1
H4C1
H3C1
H1-1
ADH5
ZNF587
AP3S1
LAYN
GEM
GCLM
C5orf51
TMEM192
CASP5
SEC61G
IL6ST
UQCC2
ALDH18A1
TIGD4
ARFIP1
ZNF134
GRAMD2B
MRFAP1L1
BLOC1S4
SLC35D1
RFX1
ZNF519
TEX2
C1orf105
TXNDC16
SRSF6
PDHX
APIP
BMP4
PEX3
ADAT2
JHY
BIRC3
TP53BP2
HSD17B7
PI4K2B
ZC3H12C
PIGC
PIGL
NCOR1
ARFGEF3
MRRF
SOX4
NBPF19
NBPF26
NBPF14
RUNX1T1
FOXN3
NUP93
RGS2
OSCP1
SETMAR
KIAA0319
PLD1
ARMC4
CPEB4
PSMF1
TEP1