ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11919277 | hESC derived neuromesodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMAD7
DPPA5
CER1
CDX2
METTL11B
ANKRD1
PPP1R16A
FOXH1
VENTX
UTF1
URM1
TMPRSS11E
HOPX
ZNF18
MTF2
CD99L2
REST
CLDN9
CLDN6
ATP1A4
CDH18
SFRP2
SHISA5
TREX1
SMARCA2
OR10AD1
LOC102724770
DGCR6
TCF7L2
RPH3A
FAM174B
GATA6
RNASE6
EDDM3B
DUSP29
GOLGA6D
MBNL1
VOPP1
NAA30
POU5F1
HIGD1A
ACKR2
GBX2
SP5
ZNF600
GIMAP5
MICA
ID3
OR5K3
ARHGEF38
SCGB3A2
C9orf85
ABHD17B
NTRK2
CMC2
SHCBP1L
LIN28B
OTX2
WBP1L
DUSP6
FBXW11
BTG2
GAD2
RASGRF2
LEFTY2
MTRNR2L8
HSCB
CHEK2
BDH1
ABCB5
DEFB4A
PRKG1
SACS
MAMDC2
MT1HL1
DHDDS
NLRP12
TERF1
SIPA1L2
PSMD9
HPD
ZPLD1
SH3GL1
CHAF1A
DEFB4B
DAOA
MACROH2A1
ARID3B
SCN5A
GAST
SLC7A5
ENO1
FOXP4
MESP1
FOXA2
ZBTB8OS
RBBP4
RIPK1
TCF7L1
KIAA0895
ETS1
TRPM1
KIF21A
CST1
OR5AR1
ITPRID1
APOBEC3F
ENSA
TNNI3K
WNT5B
TENT5B
MUC4
GNAI1
MBNL2
SERINC5
NES
FZD8
CREB5
FGF2
COPZ1
FLVCR1
SPATA45
BCOR
DDX46
KCNIP4
KIAA1522
CACHD1
UGP2
CCL26
PRICKLE1
C10orf99
EOMES
MFHAS1
GUCY2C
ZNF90
APLNR
CCDC169-SOHLH2
CCDC169
IL34
DUX4
ZNF664-RFLNA
ZNF664
CCDC92
CD82
RNF24
ZNF436
FRAT2
SOCS3
LHPP
NAV2
AMN1
PRSS56
CHRND
CADPS
PPBP
PF4
LRFN5
GCNT2
PRODH2
TRAPPC8
NRG1
PHLPP2
HOXD11
HOXD13
HOXD12
PREP
TIAM1
LINGO1
SSB
SAMHD1
EBF2
EPHA4
ALDH3A2
ZSWIM3
ACOT8
AK4
SEMA6D
FANCF
MDK
GPR31
ZNF608
SLC16A12
FAM83F
ZNF649
REV3L
CTNNA2
LRRTM1
LIPK
KCNA4
BOD1L1
PACSIN2
CRTAM
NEUROG3
P2RY12
CCBE1
GSN
PINK1
GNAI2
AGPAT3
LOC105370980
DSP
PLAGL1
PMEPA1
GGCX
EXOC7
LGALS12
PLPP2
CBFA2T2
FAM151B
ZFP36L2
HBG2
HBG1
STN1
USP7
C1orf127
INO80D
LEMD2
ZP2
IL17RD
ABHD11
CCPG1
C15orf65
CAV1
NR5A2
SNX16
HESX1
TALDO1
FOXB1
DDX43
MDN1
ZNF343
ARHGAP10
CCND3
TAF8
SUN5
BPIFB2
PHC1
TMEM43
CHCHD4
WDR25
WARS1
FGFR2
IFNE
DLX6
CHFR
PIPOX
NKIRAS2
DNAJC7
DCLK1
RMND5B
SMIM32
GOLGA6B
GABRB3
TEKT3
FAM120B
DLL1
ENPEP
B3GALT5
MTHFD1
PNRC1
TMEM63A
LEFTY1
CRISPLD1
MYSM1
PREX2
CCDC9
MSX2
MFSD4B
EFNB2
ITGB5
PDGFA
AGO1
LRRC10B
OPN5
ACTN4
C1orf100
FBP1
CRYGB
CCDC85A
MYC
TDGF1
SRRM4
RAB11FIP1
HOXB3
HOXB4
SRCIN1
TMEM70
LY96
F11
GLYATL1B
LRRC70
TUBB2A
SLC46A1
TMEM225
HGC6.3
CST5
DMXL1
MRS2
CEP152
SLAMF1
CFAP410
FBXO40
ZNF281
LRRN3
IER5L
NFE2
TFAP2A
PSMA1
CA2
RASA1
AGFG2
LCN1
BCL2L1
DEFB132
TMCC1
PITX2
LRAT
STON1-GTF2A1L
RBM20
ZNF486
LOC107986453
PIM2
COMMD7
LYPD6B
TFPI
CNOT11
UNC5A
PPEF2
CLIP2
SESN3
TNFRSF9
PLSCR4
SMN2
SMN1
TACC2
FRG2C
GOLGA6A
PKIG
SERINC3
TPGS1
GOLGA6C
CDKN1A
GPRC5B
TBC1D23
RPS13
MRPL20
RNF43
KBTBD8
NFU1
BTBD10
MAD1L1
WASHC3
HOXB1
GDF3
NKX1-2
RBPMS
ANK2
DACT1
KHDRBS1
SLC22A23
RNFT1
DHX32
PALLD
MAGEA11
KLF6
SLC39A8
TTC13
ARV1
KRT8
KRT18
TPCN2
CDX1
DKK4
PYGM
SGPP2
DNMBP
SNRPN
ARAP3
PLA2G2A
VAMP8
VAMP5
GRAMD2A
OR8H1
OR5T1
LRRC2
SPIRE1
RANBP6
C5orf63
RNGTT
SCARB1
PSMG3
EXT1
FMNL2
SMAD3
DDX3X
TRIM2
PLAAT3
DMTN
FGF17
CSAD
ZNF740
OR7D2
ZNF503
ZCCHC3
C20orf96
PAK1
TNFSF8
FAM222B
DNTT
SLC35A2
PLAAT4
SCAF4
CSF3
NANOG
STEAP3
NRARP
RNF220
CSK
TBC1D16
HSD17B4
ZNF121
TLE3
PCSK1
ZNF16
VANGL1
TDRD7
DMRTB1
FAM153B
DACH2
LONRF3
RAPGEF2
PLP1
SEPTIN9
NIN
TRPM2
STIM1
SOX6
MUC1
CCDC93
CHI3L1
MYBPH
CCN2
IL22RA2
SULT1C4
MVB12A
BST2
FZR1
CARHSP1
SHANK2
CERS4
RNASET2
CTBP2
ST3GAL6
NADK
CSF2RB
SALL3
SULF1
HAS3
ST18
TMPO
ZEB2
PDHB
ERICH2
PHETA2
NAGA
ZNF391
SPART
GTF3C4
DDX31
ZNF483
SULT6B1
RCN1
SEPTIN5
S100A7
ZNF577
SMYD2
L1TD1
SOX2
TBC1D2
SIN3A
PPP1R16B
GPR19
VANGL2
RHBDF1
MPG
ID1
NMNAT2
SPDYA
OBI1
MAGEB2
C16orf78
ODF2
KIFC3
HERC3
ETS2
MCF2L2
PCNX2
RNF144B
STRA6
FLRT3
FAM110D
LSM6
FAM227A
CBY1
BUB1
ACSS3
METTL24
AP3B2
GTF2I
IFITM1
IFITM2
IFITM3
ADGRL3
EIF4A2
UHRF1BP1L
AKAP13
ANKRD34B
KDM2B
SLC66A2
HSBP1L1
ZNF296
GEMIN7
INSM1
MPZL2
DNASE1
PTBP2
RFX8
FRG2
FAM227B
LIN28A
SUCLA2
CRYL1
RIF1
FGF1
DPPA2
DPH6
SPIN1
TBX3
NCDN
KIAA0319L
FAM24B
ZNF202
MSL2
SASH1
SPRED2
LRRN1
GCNT1
MRPS15
SLC2A14
ART1
PIM1
GATA4
KLHL7
GPR179
MUC3A
SGK1
GABRQ
CACNA2D1
SYT16
PRKX
COLGALT2
DAGLB
TPST2
DDX59
ZSCAN2
TFE3
PSEN2
MS4A4A
REX1BD
MTRNR2L1
KDELR1
GRIN2D
FOXD1
LAPTM4B
ROR1
IFRD1
IGSF21
CHD7
FEM1B
ZNF536
FAM200B
FZD10
BRINP1
HOXD1
TIMP4
CCAR2
C8orf58
ARHGAP40
TCAF1
MNX1
TCHP
ABR
LRRTM3
CAPRIN1
AEBP2
PRAC2
PRAC1
HOXB13
ARFGEF1
VSNL1
INO80C
WNT3
SAV1
CR1L
GADD45G
NXPH2
IKZF5
ACADSB
ADGRF5
OCLN
FAM25A
HLCS
CARMIL1
CD9
ZFP64
SRSF4
ARID2
AHCYL2
ENKUR
FSTL5
HGD
YWHAQ
GSTT2B
ALDH1A2
PLEKHG5
SOX5
RIMKLB
GMCL2
PPP1R18
NRM
CUX2
SYT6
ADA2
PRODH
LOC102724788
FOXJ3
ZNF814
TMPRSS15
LZTS1
LHX4
ZBTB40
LRMDA
XIRP2
CCL20
FEZF2
DOK7
DTNA
CKAP5
CORO1C
GPR39
GSAP
TOP1
RNF182
APOBEC3D
APOBEC3C
ISOC2
AUH
MOBP
TM9SF1
GJA10
PCDHB16
PCDHB9
PCDHB8
PCDHB7
CFAP298-TCP10L
CFAP298
TSSK4
ZYG11A
RBP1
MLLT6
OLFML3
FZD5
RTL9
KCNMB4
ADGRL2
MBNL3
ZNF705B
LMNA
MEX3A
COBL
CYP2S1
KIFBP
ZNF781
PHC2
NOXRED1
SAMD5
HIP1
CHN2
CPVL
XCL1
PKDCC
C22orf39
DKK1
STMN1
ARMC12
KNG1
NBPF12
PHF19
MDFIC
CFLAR
PROCR
MED12
IL2RG
PLA2R1
HDAC9
CELF4
PES1
TCN2
SEMA3A
FZD2
SET
H3C8
H2BC10
SLC2A11
HOXA1
DERL3
SNAPC3
SOX14
ZNF572
MSX1
ADAM18
SMPD1
NAA50
ATP6V1A
ST6GAL1
CDC42EP3
CRYBB1
CRYBA4
LIMCH1
ATG9B
ABCB8
MX1
SLC6A7
KNDC1
LDB2
TGIF2-RAB5IF
TGIF2
ZDHHC14
KAZN
LIMS1
ZC3H11A
ZBED6
STAM2
SALL4
SNURF
UBAP2
ZBTB38
CLEC7A
TAF4B
PCDHGC5
PCDHGC4
PCDHGC3
HPGDS
ZNF875
TPCN1
ZNF705G
OLFML2A
NR6A1
CYP11A1
WDFY2
SAMD3
POSTN
ACVR1
LRATD2
ZBTB45
PSME3IP1
RSPRY1
TRIM28
GALNT8
TNFRSF19
GJA1
IGDCC3
LPCAT1
CPLX2
LFNG
PBX2
GPSM3
MTM1
ABCC2
MT1X
MT1H
MT1G
DST
DISP3
ZIC2
BCL2L14
OPTC
ZCCHC14
CALM2
ILDR1
SEC22B
RFFL
VCAN
TKT
PGAP6
KDM3A
TTYH1
EGFLAM
SLC7A1
ADCY5
MCM6
ZC3HAV1L
CCN3
MSR1
ATXN7L1
INTS10
SEC14L1
DMRT1
CLSTN1
OCIAD2
PGPEP1
SPRY4
EPHB4
SLC12A9
SC5D
MOG
MYLK4
PDE4C
KMT2B
UNC13B
LAMP5
PITPNM2
RUNX1T1
PHLDB2
TEAD4
AADACL3
ROR2
ZNF565
VASP
PPM1N
DENR
IDH2
TENM4
ANKDD1B
WDHD1
SOCS4
GRIP1
SSTR2
PTX3
DPPA4
ALPL
FANCA
TCL1B
GORASP2
SPIRE2
WFDC8
ONECUT2
BRINP2
ASTN1
KRT6A
LAX1
WDR74
STX5
PDE1B
GABBR1
ZFAND3
EPB41L2
HROB
FRA10AC1
KDR
SORBS2
NDUFS5
TJP2
SIX1
UGT2B4
CCDC200
ATF4
MIEF1
OTX1
TSGA10IP
GREB1
PPP1R1B
AKIRIN1
NODAL
NOD1
HAPLN1
FAM180A
ZSCAN10
CNN3
GPC6
SUPT4H1
PPP1R3B
MEIG1
DCLRE1C
HERC2
BIN2
RAI14
DTX2
EMC8
COX4I1
FAT3
TRIM24
RIN3
FOXP1
MAD2L2
DRAXIN
LRGUK
ETV4
CGNL1
NRXN1
HEY2
CELF3
RIIAD1
TRPM3
RUNX1
RYR2
ASXL3
LGR6
NUDT4B
NUDT4
GRK7
FBXL14
ZNF43
RNASE10
SRCAP
LOC730183
ETV1
GSX2
SPAG9
TRIP11
ZP4
RPGRIP1
ANXA2
RBM47
PTCH2
LHFPL5
CLPS
SNX30
UHRF1
ARRDC5
YARS1
S100PBP
WDR36
BRDT
C6orf132
MMS19
UBTD1
CNGB3
DUSP12
HNRNPA3
CDH6
CLEC6A
UNKL
FHDC1
SPARCL1
RAPH1
SPIC
GUCA1A
ITGB1
SPO11
VRTN
GUCA1ANB
ADAM28
DDR1
S100A11
TMEM104
NAT9
KLF7
MAST1
RTBDN
MPZ
SDHC
PDCL
CDYL
SPATA12
KLF3
TLE6
TEAD1
CFAP20
APOBEC3G
SACM1L
BCL9L
TRIM39-RPP21
TRIM39
FOXI1
KMT2A
GDF11
MTHFD1L
ZSWIM4
C7
SOAT1
MYCL
SORBS3
ECHDC1
CRYBG2
IFIT1B
IFIT1
PRRT1B
GAS1
RCOR1
ABCG2
HEATR4
MPP1
DEFB110
LSR
ZNF335
ADAR
P2RY14
HELZ
LRIG1