ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532165 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◣ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

LOC102724770
DGCR6
NRARP
EEF1A1
GOLGA6D
NR5A2
PPBP
PF4
TERF1
SOX2
SMARCA2
CADPS
CDX2
TCF7L1
GOLGA6B
FRG2C
CBFA2T2
NES
ID3
SRRM4
FGF1
RMND5B
DNMBP
PIPOX
MAMDC2
DUX4
TARS1
OBI1
FOXA2
SMAD7
DUSP6
URM1
GOLGA6A
DPPA5
ARHGEF38
POU5F1
GAD2
SSB
LFNG
HMGB1
PRICKLE1
ANKRD1
APOBEC3F
ZSCAN2
FAM227A
CBY1
NANOG
ZNF483
MUC1
GOLGA6C
FGF2
AGO1
ETS1
PLAGL1
PTMA
GPRC5B
PHC1
PRKG1
LRRN3
SFRP2
MTF2
LHPP
SULT6B1
RPH3A
TALDO1
RNF220
CREB5
SNRPN
WDFY1
VENTX
UTF1
CDC14B
RPGRIP1
LRRC10B
NAV2
GIMAP5
CD82
SOX6
TENT5B
OTX2
FOXD1
TMPRSS11E
BDH1
MUC4
CLDN9
CLDN6
SACS
BUB1
SCGB3A2
SGMS2
SAMHD1
CACHD1
ABHD11
NFE2L3
NADK
APOBEC3D
APOBEC3C
COMMD7
DDX17
NTRK2
FAM151B
RIPK1
ZNF532
PPP1R16A
FOXH1
TRIML2
PCBP1
IER5L
RIF1
KDR
FLVCR1
SPATA45
NCDN
KIAA0319L
PRSS48
ZSWIM3
ACOT8
PIM2
SACM1L
NLRP12
RNASE6
EDDM3B
BCOR
ZNF398
TMEM63A
LEFTY1
SOX5
PLPP2
ATP1A4
LRRN1
HDAC9
NFE2L1
FAM174B
REST
ZCCHC3
C20orf96
CHFR
FAM120B
DLL1
SLC2A14
ZNF775
TLE1
SHISA5
TREX1
EYA1
DPPA4
SOCS3
FAT1
ISOC2
DDX43
MYSM1
WNT5B
CYTH2
AHCYL2
SLTM
TGIF2-RAB5IF
TGIF2
FBXO40
CBX8
TUBB2A
C9orf85
ABHD17B
SMYD2
NDUFB5
MRPL47
ART1
CAPZB
BCL2L14
AASS
FRG2
DPH6
FAM180A
PGK1
ZFHX3
LRIG1
GNAI2
PSMG3
TRIM13
MDN1
SHCBP1L
NAA50
ATP6V1A
KNDC1
CER1
METTL11B
GLYATL1B
PSMD9
HPD
SMN2
SMN1
CARHSP1
ESRP1
POSTN
TMEFF1
ENSA
LDB2
GTF2I
MRS2
KLHL7
SCAF4
CDH10
GRK6
PHETA2
NAGA
TMEM70
TRIM24
LY96
DNTT
FAR2
BTG2
ZNF536
PCNX2
ARAP3
L1TD1
ZNF781
HSCB
CHEK2
GLI2
GADD45G
LRFN5
PARP1
KIFBP
AEBP2
ATG10
DMXL1
KIF21A
GCNT2
PLA2G2A
FGFR2
ZNF18
HESX1
JMJD1C
RASGRF2
CACNG8
CSNK1E
LIPK
CNMD
OR5F1
HGS
ARL16
HOPX
SNURF
TFE3
LIN28B
AKIRIN2
LINGO1
PCDHB5
GSX2
TAL1
MFSD4B
SGK1
AKR1D1
SAMD5
FZR1
GSAP
ZBTB45
TRIM28
TNRC6A
PTBP2
MBD4
IFT122
AFF1
DEFB113
DEFB114
ICMT
HES3
S100A11
A2ML1
KCNN2
FBP1
NOTCH1
FGD4
EOMES
FAM153B
ZFC3H1
THAP2
ZNF608
TKT
SINHCAF
GNA12
LZTS1
MEIS2
FOXN3
MOBP
SP9
GDF3
SIN3A
FAM24B
NRG1
CD99L2
MEX3D
SHANK2
PRDM14
PDGFA
ZNF202
SOX21
GFPT2
KMT2B
GLB1L3
IGFL3
SNAPC3
SEPTIN5
ITGB5
MED25
FUZ
PHLPP2
CELF3
RIIAD1
CHMP7
ETV4
P2RY12
OBSL1
INHA
LRRTM3
ESR1
BEND3
LIN28A
MS4A4A
PMEPA1
AJAP1
CHRNA1
SMCO1
ADAM28
TES
SOX14
TIAM2
DAGLB
FOXI3
LRRTM4
SEPTIN9
PRAC2
PRAC1
HOXB13
GUCY2C
E2F7
RFX4
DIDO1
GID8
EXOC7
ETV1
GMCL2
CFAP298-TCP10L
CFAP298
TUBB
MDC1
CHCHD3
KIAA0895
ZNF304
TCHP
TEKT3
QSER1
TRAPPC8
SYNDIG1
PDCL
PGAP3
ERBB2
FADS3
CCDC169-SOHLH2
CCDC169
LRRC47
KDELR1
GRIN2D
TMC5
EBF2
ROR1
HOXD11
HOXD13
HOXD12
INO80C
GABRB3
CSRP2
CELF4
TFAP2B
UGP2
ZNF649
TPST2
NEUROG3
LRGUK
FAM222B
MKRN1
FOXP4
MAD2L2
DRAXIN
TPH2
FRMD4B
RASA1
TACC2
GSTT2B
LITAF
SYN3
FZD5
SP8
CMAS
PLPP3
ZIC2
ZIC5
ZFP36L2
KBTBD8
FBXL19
SLC25A36
F11
UNK
H3-3B
RAD54B
FSBP
GJA1
TDGF1
LRRC2
IL34
SPIN1
STOX2
PGBD5
USP44
DMRT1
CSAD
ZNF740
CYP2S1
OR5K3
MARCKS
HMOX1
PPP1R16B
PDE1B
SMPD1
TMPRSS11F
RNASE9
CDH9
MID1
VCAN
TFAP2A
HBG2
HBG1
ARHGAP42
HSD17B4
ARSD
ZEB2
TTC13
ARV1
ZNF519
SMIM14
ADGRD1
MSR1
MOG
PBX1
CCT2
BRINP1
SENP2
ZFAND6
SALL3
ANK2
FBXW11
UBQLN4
RAB25
LAMTOR2
ID1
TNNI3K
SMC6
GEN1
KNTC1
LEFTY2
PRR15
GPR31
CLCC1
SLC39A8
TSKS
AP2A1
PYDC5
IFI16
MEF2C
ZXDC
BUB1B
CTBS
PREX2
GET3
ARID5A
FZD8
SMIM32
VASH2
MT1HL1
GABRQ
RNASET2
SMAD3
SIX2
PANX1
PPP2R3A
SUCO
CRYBB1
KCNMB1
CRYBA4
DCAF4L1
SLC30A9
FXYD5
FXYD7
HSPA13
ATOH1
TFAP2D
FGD3
DDX3X
NANOGNB
CLEC4C
SERINC5
PBX2
GPSM3
SLFN12
ZBTB8OS
RBBP4
TENM4
C7orf57
ZNF627
SUN3
TRPM1
LRFN3
SEPHS1
ARID2
TMEM41B
GID4
ATPAF2
KCNJ1
C1orf127
SKIDA1
MLLT10
RIPK4
CFAP20
SLCO5A1
SRSF7
POU3F4
HMGN1
PER2
PAK1
CAPN3
AASDH
MLLT6
PHRF1
KDM2B
CACNA2D1
OPN5
BRINP2
ASTN1
CD200
RAB17
IL17RD
TEAD1
GRIN3A
SCD5
SLC9C1
SLCO1A2
SPRY4
CCBE1
ARIH1
JADE1
RPS24
STN1
SASH1
UBD
ZIC4
ZSCAN10
PDP1
MUC3A
CRH
OLFML3
FERMT1
FOXP1
VSNL1
SLC46A1
AFAP1
LOC389199
COL6A1
FAM98A
SVOPL
FAM81B
TRIM71
TRPC4AP
PPAT
PAICS
PHF5A
ACO2
SERPINA11
TBC1D16
TCAF1
RPSA
RABEP1
THY1
OR5AR1
RBPMS
TBC1D2
TESK2
MMACHC
ONECUT2
VGF
ZDHHC1
HSD11B2
EP300
CXADR
RNF186
PILRA
KLRC1
SLC1A3
ADD2
IGDCC3
CNOT11
GMPPA
ASIC4
USP7
ESX1
ARF4
CRLF2
BORCS6
RNF213
DEFB4B
CYP1A1
CHD6
ARHGEF19
SRCIN1
NUAK1
KCNA4
CEP41
ADA2
NECTIN1
NXPH1
PAG1
PDHA2
CCDC88C
IP6K2
RARG
ITGB7
NR2F2
ZYG11A
S100A16
ITM2B
GAST
USP53
CAPRIN1
PDIA4
RRBP1
RTN4
DISP3
NXPH2
ITPRID1
CTTNBP2NL
RPRM
CPA2
CAV3
SALL4
TRMT2A
RANBP1
CSRNP2
HOXB1
RPL27
IFI35
PIN4
MAST1
RTBDN
ZNF140
INO80D
WDHD1
SOCS4
MRPL20
IQCH
AAGAB
SOCS5
AHCY
SEMA6D
TRAPPC3
MAP7D1
GAS1
TIAL1
GRHL2
HES6
LPCAT1
LBP
FOXJ1
KLF7
PRKAG2
ZNF428
SRRM5
ITGB1
IKZF5
ACADSB
VIM
NFASC
ARHGEF10L
PDPN
SLC16A13
SLC16A11
CPT1A
ESRRA
CATSPERZ
ALDH1L2
LMCD1
WDFY2
AK4
KLKB1
FYN
HEBP2
ZNF506
PPP1R12B
UBE2T
ERVH48-1
GATA3
TSPAN14
ADRM1
DNMT3A
TRAK2
STRADB
CDK17
TJP2
LHX2
TSPAN5
POLR3G
MBLAC2
TCF7L2
GUCA1A
MTMR9
ATF4
MIEF1
ZIC3
ATAD2
MAGEB2
GPM6B
FOS
DPPA2
CYP2B6
SFRP1
PLCH1
EGR3
DTX2
TRIM2
DUSP16
MIDN
ATP5F1D
ZNF195
UNKL
ZNF484
SPRR2F
CITED2
ZNF77
DAAM1
FAM227B
C6orf132
TBC1D17
AKT1S1
PNKP
ALS2
ZSWIM4
ELF2
PLSCR4
CSF2RB
ZAP70
HK2
MSI1
SYNDIG1L
KCNQ4
FAM110D
TMED7-TICAM2
TMED7
LCA5
MACROH2A1
IFRD1
ERG
KLF3
SPAG4
SLC10A2
CGNL1
SHC1
FLAD1
CKS1B
DDR1
ISL2
RBP1
LOC100130520
CD300H
GABARAPL1
MUS81
CFL1
LRRC8A
KYAT1
FOXJ2
HEY2
VOPP1
DUSP29
TMUB2
SLC4A2
CDK5
ASIC3
MTRNR2L1
FOXB1
SLX4IP
MKKS
GHRH
SIX3
CCDC9
PXDC1
LIMCH1
ZNF296
GEMIN7
PLAAT4
TSGA10IP
POGLUT2
BIVM
DHX32
CAVIN3
NRROS
FOXO6
DDX11
TFAP2C
TRIB1
MDK
SOX13
SLC6A8
PNCK
SET
SLC24A3
ISL1
ZBTB6
C1R
RC3H2
PTX3
C11orf58
ZNF518B
BCL9
ANO1
EXOSC9
TICRR
TLE6
PLCG1
CCN2
TMEM43
CHCHD4
AMOTL2
HRG
SH2D3C
PALLD
IFITM1
IFITM2
IFITM5
UGT8
PHAX
ALDH7A1
OR7D2
UGT2B4
CELSR3
CACNB2
LDB1
TOMM40
STK32C
LRRC27
PLA2R1
TDRP
ST6GAL2
FRAT2
HIP1
KRT8
RNF31
PSME2
EMC9
PSME1
HNRNPDL
ENOPH1
NPY2R
WBP11
C12orf60
MKNK2
PRICKLE2
SKIL
GJC1
FEM1A
SPRED2
SUCLA2
CDH6
ARF3
WNT10B
PTAR1
ZBTB37
GPATCH8
EXOC5
AP5M1
ZNF101
ATP13A1
ST18
ZP2
PIMREG
AIPL1
THBS2
SLC2A4
SGPP2
DACT3
ST6GAL1
EMSY
TUT1
MTA2
POLB
PRKCA
HECW1
ADNP
IQSEC2
AGK
CD2BP2
PSMB7
PPP1R1B
FZD2
C1orf100
PPEF2
ZNF121
SCN5A
PALM2AKAP2
AMN1
FZD10
CKB
TRMT61A
WDR49
DDX59
DPYSL3
ARID3B
ST3GAL6
BARHL1
GBX2
H2AZ2
SULF1
SOX4
RHOBTB2
EPHA2
ZNF184
CCDC172
ZNF343
TMPO
RASSF8
FOXO1
HSPA4
PSME3IP1
RSPRY1
IGSF9
SLAMF9
FAM167B
MTRNR2L8
PRODH2
TC2N
INSM1
YAF2
TRPM3
HECTD4
KDM5B
HNRNPU
CTBP2
CALR3
C19orf44
DGLUCY
OAZ2
SPATA22
PSMA1
LMX1A
PDE3B
ERVMER34-1
CCDC200
TRMT10C
AUH
FGD6
VEZT
GAL3ST4
STAG3
GPC2
GRIP2
NELFCD
EPHA1
RAB30
GALNT3
SFPQ
RGS3
SMARCAD1
TMEM132A
THEM4
RBP3
NMNAT3
SH3GL1
CHAF1A
PTPN2
PWWP2A
ZIC1
TRIM38
ARC
PPP2R1B
IFNE
OTX1
FSCN1
GRID2
USP17L21
USP17L20
USP17L12
USP17L22
SDK1
ZNF90
PHF19
DNM1L
CLEC6A
TRIM39-RPP21
TRIM39
PKIG
GADD45A
WASF1
CDC40
SERINC3
INKA2