ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
NES
NR5A2
PIPOX
SMARCA2
PLAGL1
NAV2
PPBP
PF4
SOX2
HMGB1
SMAD7
ARHGEF38
CD82
RMND5B
FLVCR1
SPATA45
TERF1
LRRN3
DNMBP
CADPS
MUC1
TALDO1
CDX2
BUB1
SOCS3
RPGRIP1
ATP1A4
TMEM70
LY96
HDAC9
LRRN1
GOLGA6B
SPRED2
OBI1
OTX2
DPPA5
ATP8A2
SSB
NTRK2
AGO1
DNMT3B
KLHL7
GOLGA6D
TCF7L1
LRRC10B
BDH1
METTL11B
ADAM28
OR5AR1
GPRC5B
REST
RIPK1
C9orf85
ABHD17B
TARS1
RPH3A
ANKRD1
MTF2
FGF1
GOLGA6A
FAM227A
CBY1
CACHD1
PSMG3
ID3
MAMDC2
CBFA2T2
CYP2S1
ABHD11
TENT5B
KDR
APBA2
FGF2
SLTM
GLYATL1B
FBXO40
POU5F1
CLDN9
CLDN6
GOLGA6C
CACNG8
TNNI3K
LZTS1
NFE2L3
SCGB3A2
SLC7A5
NAA50
ATP6V1A
PALLD
CYP1A1
GIMAP5
PLPP2
SERINC5
SFRP2
STON1-GTF2A1L
PHF5A
ACO2
RAB17
MUC4
SOX6
FGD3
GNAI1
DAGLB
SRRM4
FIGNL2
PIM2
DUSP6
RNASE6
EDDM3B
PRSS48
PHC1
TNC
SHCBP1L
FAM222B
SAMD5
IFRD1
DHX32
TMPRSS11E
PPP1R16A
FOXH1
ZNF483
FBP1
HOXB1
NANOG
SOX21
RASA1
KIF21A
ITPRID1
DHDDS
GAST
LIN28B
TMEM47
URM1
SLC36A2
GAD2
PPP1R16B
HBG2
HBG1
ASXL3
LRRTM3
FAM174B
PARP1
PREX2
FAM180A
IGFL3
SOX5
BCOR
TNFRSF11A
NCDN
KIAA0319L
TUBB
MDC1
ZNF398
AASS
DDR1
LBP
PSMD9
HPD
SCN5A
APOBEC3F
LMCD1
GLRA1
CD99L2
CCBE1
ETS1
DMXL1
SHISA5
TREX1
EXOSC9
CSAD
ZNF740
ACVR1
SACM1L
MED25
FUZ
DEFB113
DEFB114
KDM2B
LHPP
MFHAS1
APOBEC3D
APOBEC3C
TCAF1
TUBB2A
WDR74
STX5
CER1
CXADR
TRIB2
SLC39A8
TRIM24
GRK6
DDX17
PRICKLE1
SAMHD1
PTMA
ZNF608
HSPG2
FAR2
HSCB
CHEK2
GLT6D1
FADS3
LDB2
HESX1
GAS1
GSG1
GLI2
TOMM40
GMCL2
AGK
TEKT3
FGFR2
PGAP3
ERBB2
GTF2I
BTG2
MDN1
SDK1
PXMP4
RFX4
NRXN1
LIPK
CAPZB
ATF4
MIEF1
TSKS
AP2A1
PLA2R1
SNRPN
ZFHX3
SEPTIN5
NADK
SORBS2
KNDC1
ZNF536
CACNA2D1
KIAA0895
FAM24B
TGIF2-RAB5IF
TGIF2
ZNF296
GEMIN7
SLC2A14
CNN3
ZCCHC3
C20orf96
SGMS2
PRKG1
CREB5
SCAF4
LFNG
GABRQ
PCNX2
MTHFD1L
ZNF304
PSORS1C2
MFSD4B
COL17A1
GNAI2
KCNJ1
ZSCAN2
PRR15
ICMT
HES3
GDF11
DOK7
NDUFB5
MRPL47
MSR1
LRRTM4
CITED2
CLEC5A
COMMD7
TDGF1
LRRC2
HMOX1
RASGRF2
ZEB2
CARHSP1
ITGB8
ID1
SOX13
SMIM3
SULT6B1
NXPH2
PRDM14
USP44
ADA2
HGS
ARL16
ZSCAN10
PHAX
ALDH7A1
MYSM1
DNTT
CD2BP2
MOBP
MTRNR2L8
RASIP1
IZUMO1
FUT1
FGF21
EBF2
SMYD2
RTN4
CDC14B
FOXD1
TBC1D14
S100A16
CTDSP2
SLC46A1
FZR1
FAT1
ZNF428
SRRM5
GSX2
RPL17-C18orf32
RPL17
TSPAN5
NRARP
RCN1
ZFC3H1
THAP2
MAST1
RTBDN
TNFSF8
ZNF668
SEPTIN9
CCAR2
C8orf58
SALL3
NDUFS5
ZSWIM3
ACOT8
CELF3
RIIAD1
TESK2
MMACHC
UFD1
CDC45
PGBD5
DMRT1
CRH
WFDC8
SMC6
GEN1
ZNF18
CCT2
FAM126A
SRCIN1
NECTIN1
ADGRD1
NUAK1
CARM1
ALDH1A2
CD200
TRAPPC8
PHETA2
NAGA
C1orf100
KCNMB4
TLL2
GPATCH8
TLX3
IER5L
KIFBP
OR2AT4
WDR49
LRIG1
PDPN
FGD4
BCL2L1
TCF20
TBC1D1
CDYL
SYNDIG1
BIN2
GET3
CLEC2L
CRYAA2
CRYAA
PBX2
GPSM3
SGK1
MYCL
PYDC5
IFI16
TFAP2B
ROR1
RAX
SMN2
SMN1
PYGM
FXYD5
FXYD7
GADD45G
PCBP1
GDF3
TPH2
CHRNA1
DST
SMIM32
ATP6V1G1
ONECUT2
GALNT3
ARAP3
AEBP2
NRG1
NFE2L1
LRRC47
MCF2L2
PIF1
LCA5
SGPP2
ARSD
FBXL19
FRAT2
CNMD
DEFB110
CHFR
EXOC7
DYSF
BBS7
MAP6
SUCO
ANK2
TRIM13
CTNND2
IFITM1
IFITM2
IFITM5
SIN3A
CNOT11
PLEKHA1
RBFOX2
PDHA2
PHLPP2
HHIP
LMNA
MEX3A
RAB30
CSF2RB
ZNF781
FYN
HIP1R
PPP1R3B
BUB1B
FAM153B
TRIM5
TRIM22
BZW2
ANKMY2
YLPM1
DUX4
DPH6
URGCP
TCF4
URGCP-MRPS24
BRINP2
ASTN1
ETV1
LLGL1
P2RY12
TTYH1
CSTL1
CST11
USP7
ABCB5
LARP1B
TMEM63A
LEFTY1
DUSP29
MMP10
TRIM39-RPP21
TRIM39
SYAP1
CTPS2
HOMEZ
C7orf57
KCNMB1
SUN3
CHN2
ZNF195
LRAT
CPVL
TMEM41B
BTBD10
TRNP1
FRMD4B
DCAF4L1
SLC30A9
EPHB3
SHANK2
KIAA1522
RAD54B
CARS1
FSBP
PTBP2
KLF3
FRY
CSRP2
SDCCAG8
CEP170
KCNA4
ERMN
SLC6A8
PNCK
FBXW11
LEPROT
LEPR
ITGB5
UNK
H3-3B
SDCBP
GCLC
ACSM6
DRD1
QSER1
PLN
FSTL4
NOXRED1
ETV4
FZD7
B3GALT5
TRIML2
RNF213
DLST
SYNDIG1L
SLC34A1
PFN3
PSIP1
FUS
ETFB
NUAK2
QPRT
ZNF763
SPG21
PES1
TCN2
LEFTY2
KBTBD8
KLRC1
KCNN2
TKT
EYA1
AKIRIN1
NMNAT3
PCDH1
ACCS
KMT2B
CELSR3
KMT5C
NFE2
COX6B2
CYTH2
STN1
ARHGAP42
HECW1
LINGO1
ATG10
LEKR1
LIX1
CCDC88C
MAP3K12
TARBP2
NPFF
TBC1D16
FOXI3
BCL9
PRPS1
PILRA
WDR33
APELA
LAPTM4B
PAN2
IL23A
PIGH
PMEPA1
SCARB1
ACSL6
AJAP1
SASH1
DNMT3A
CTSF
MSANTD1
PXDC1
CCDC124
FAM107A
SLC16A13
SLC16A11
MEIS3
SLC33A1
PPAT
PAICS
DDX46
SMIM14
CSGALNACT1
COL12A1
PCBP4
GPR62
ESRP1
RTP4
ESRRA
CATSPERZ
KCNIP4
PAK3
ZNF775
GJA1
GABRB3
RAB11FIP1
GPR146
FAM227B
ETNK2
AHNAK
CRLF2
ARHGAP22
ZNF251
CDX1
RHOBTB2
TEAD1
FZD8
RAB3GAP2
CD4
ST18
TRPM1
KNTC1
CCDC85A
SLC2A12
GSN
VCAN
NEUROG3
CAVIN3
SHKBP1
SOCS5
PACSIN2
BBC3
NRROS
SPATA22
RASAL2
SLC2A10
GSAP
SH3BP4
TJP2
FABP6
SFXN5
WNT6
ZNF317
OR7G3
GCSAM
PHC2
ARSG
SLC16A6
BORCS6
ZNF77
GHRH
C1orf167
GPR31
PLSCR4
ARF4
FIBCD1
HMCN2
PDCL
PCOLCE
MOSPD3
LHX2
RBM39
AQP2
ZNF665
ZNF506
ARHGEF19
AQP5
CPS1
RAB15
ZDHHC14
RNF186
PLA2G3
OBSL1
INHA
ZNF474
DDX43
AMN1
PHTF1
PLCH1
EGR3
GPR150
PANX1
ADAMTS10
LMX1A
OR6A2
WDR36
ZNF518B
ARMC3
SF3B5
PAXIP1
OLFML3
AASDH
RARB
DPPA4
PAIP2
ZBTB8OS
RBBP4
C1orf127
SMAD3
PLEKHB1
REV3L
ZNF664-RFLNA
ZNF664
CCDC92
GALNT18
FAM110D
NFAT5
POLL
DPCD
KDM2A
TFE3
GUCA1A
RBPMS
CNKSR3
SUFU
ACTR1A
KDELR1
GRIN2D
SRSF7
ADAMTS1
BEND7
TMCC1
SENP2
ADAMTS9
ZNF101
ATP13A1
ACSL1
GRAP2
CCDC90B
PDHB
ITPRIP
CDH10
RARG
ITGB7
PARP16
CCDC33
SDE2
RIF1
FZD2
TMPRSS15
CHD9
EPB41L3
INO80C
CLEC19A
PAK4
DGLUCY
YPEL3
TBX6
FAM155A
BEND3
BFSP1
SORT1
ART3
TYRO3
MUC3A
WEE1
NOTCH1
EMSY
CDKN1A
RPL27
IFI35
GOLGB1
TCP11
ST6GAL1
EXOSC2
TEX50
RAPGEF5
PLEKHG5
NDST1
RNF19A
EBF3
UQCRHL
LRGUK
SLC25A11
RNF167
PFN1
GP1BA
SLC25A48
CXCL14
NRCAM
GCNT2
CPA2
ARID3B
FOXA2
PLEKHG3
CDH18
DACT2
SPRYD4
MIP
ZNF484
PRR14L
DEPDC5
ZNF202
C18orf25
SNX19
DVL2
PTGS1
RPL21
PHF23
GABARAP
ELP5
CTDNEP1
NACC2
TMEM31
VENTX
UTF1
PTPN2
SLC38A3
S100A7
PSME3IP1
RSPRY1
SPRY4
CSNK1E
STEAP3
ARMH4
ARID2
MAD2L2
DRAXIN
PPP2R5A
CDON
SNURF
TSGA10IP
CACNA1S
ASCL5
HOPX
L1TD1
TGIF1
PRICKLE2
FOXD3
CCDC54
MRPL20
KLKB1
ADAR
CRYBG2
LIMK1
ARIH1
SMPD1
ZNF532
TFAP2A
ETV6
ZAP70
DPYSL5
COX8A
DLC1
FBN2
MOG
TRDMT1
LRRC70
AUH
PCDHB16
PCDHB9
PCDHB8
PCDHB7
LMOD1
ZBTB45
TRIM28
MAGEB2
CDK17
CELA1
PPEF2
UQCRQ
LEAP2
GDF9
SGCA
LOC107986453
FEZF2
HEY2
TMED7-TICAM2
TMED7
C6orf132
MCM10
TRAPPC3
MAP7D1
PYGO2
PBXIP1
LOC101928120
TMC5
KDM3A
WASF1
CDC40
BCL2L14
SEMG1
CAPRIN1
OAZ2
RNF24
SCOC
SVOPL
ATP5F1E
TUBB1
CDK2AP1
KIF26A
SYT12
SPAG11B
SPAG11A
DEFB104B
DEFB104A
FMNL3
LPCAT1
JAK2
INTS9
HMBOX1
TUT1
MTA2
GFPT2
FRS2
PDIA4
GSPT2
TTF2
RNF144B
RNASET2
SAXO1
RRAGA
KRT6A
CCDC30
GNA12
LRRC8A
KYAT1
ZNF35
RGS3
DTX2
ARF3
WNT10B
ZNF436
RAG2
IFTAP
ZNF3
COPS6
TES
GET4
RCAN3
MSANTD4
ESR1
POU3F4
CFAP298-TCP10L
CFAP298
IDNK
KCNAB2
PDCD6IP
MTM1
NPR1
ILF2
SH3GL1
CHAF1A
INO80D
PCYOX1
SLC9C1
TIA1
ZNF438
MICAL3
SALL4
ALPL
NODAL
N4BP2L2
UNC13B
DUSP12
ACOXL
TIAL1
NRIP2
MAP3K9
LRMDA
ZXDC
MEX3D
TRPM3
TOP2A
UBD
CST1
TTC39B
XYLT1
SPARCL1
ABCC2
ARHGEF4
EIF4E3
RNF220
ZIC4
SLC25A36
PWWP2A
ZIC1
PDZK1IP1
DUSP15
ZYG11A
CBX8
COBL
CANX
NTN1
ATP6V0D1
AGRP
FAM200B
MARCKS
SPHK2
CCDC167
RPL18
FAM83E
ZNF180
NAALADL1