ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852808 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◣ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
ANKRD35
KRT31
LGALS8
GABPB2
CELF3
RIIAD1
LFNG
SRP68
ARID2
PTMA
NAV2
MTF2
ZMAT4
NKD2
CDX2
GEMIN4
CCPG1
C15orf65
SIPA1L2
CTNNA1
LRRTM2
FAM227A
CBY1
PYM1
DGKA
GALNT10
MAMDC2
BTBD11
TNFRSF11B
COLEC10
SEM1
LRP12
HES1
DPYSL3
CEP20
SRGAP1
NOTCH1
RORC
ECT2
MED25
FUZ
TMCC1
ALDH1A1
TMPRSS15
USP3
TARS3
C2CD4D
FSCN1
LYPD6B
LYPLAL1
DUX4
ANKRD33B
NDUFB5
MRPL47
IFRD1
PRR15
ERMN
MRPL36
NDUFS6
ZNF750
SNX27
PER2
TGFBI
PIPOX
KIAA2012
TTC39C
GSN
SEMA4D
HAUS6
TSKU
CADPS
ERG
SLC12A7
LRATD2
DSP
FGF12
MSRB3
RNF145
NMNAT2
ANKRD6
ATP8B1
PTGR1
CIT
POLR1F
GGH
MPP2
MARCKS
HDAC4
LOC100506422
C1QTNF7
PSEN2
NRCAM
ERCC4
TASP1
RBM48
PEX1
POGZ
CCT2
EPHX3
MRO
SPHK1
EPYC
RSPH4A
TNRC18
LOC100129484
PRSS23
NEDD9
MATR3
LAP3
ANKRD44
DNAJC6
GCNT1
IL21
VWA2
NTN5
PPP1R14D
BAG3
WIF1
TLE3
ZDHHC3
EXOSC7
PLPP2
TTPA
SELE
LINGO1
CLEC4F
SOX21
PLEKHG1
SPRY4
STXBP6
PDE4DIP
MACROH2A1
RPGRIP1
DCSTAMP
IGF1
SLC2A8
SLC25A25
NAIF1
TGIF1
COA8
BAG5
ITGB3
SLCO5A1
ADCY10
MAPRE3
GTF3C3
C2orf66
SCN1A
ESRP1
ADAMTS19
KLF6
ARHGAP8
ARNT
SMCO1
KRTAP3-2
KRTAP3-1
TMPRSS7
BCL2L1
CLIC5
UPF1
TUBB2B
ETV5
VWCE
MYC
SLC20A2
ETV1
CYP24A1
FERD3L
LSM5
AVL9
ACSS3
THEMIS
PTPRO
LOC102724770
DGCR6
SMARCA2
REST
SOX2
TMPRSS11E
NES
NR5A2
DPPA5
TERF1
SMAD7
SACS
SOX6
FRG2C
PLAGL1
ARHGEF38
OTX2
ZNF483
METTL11B
WDR74
STX5
ANKRD1
DNMBP
LRRC10B
MUC4
MUC1
ID3
GAST
MTRNR2L8
ZSCAN2
CACHD1
DUSP6
AGO1
HMGB1
ZBTB8OS
RBBP4
NRG1
ATP1A4
APOBEC3F
SPRED2
NTRK2
TCF7L1
RMND5B
URM1
RIPK1
PIM2
GOLGA6D
CD99L2
FLVCR1
BDH1
SFRP2
LRRN1
MTRNR2L1
VENTX
UTF1
COL17A1
BCOR
TENT5B
LRRN3
HDAC9
MUC3A
FAM222B
TARS1
SOCS3
SERINC5
GIMAP5
FGF1
ZNF608
SHCBP1L
SPATA45
PPBP
PF4
SGK1
GDF11
PHC1
CD82
SSB
MFSD4B
ITGB8
SNRPN
ID1
PRICKLE1
CLDN9
OBI1
KIF21A
MTHFD1L
CLDN6
TDGF1
ZSWIM3
ACOT8
SAMHD1
RPH3A
SRRM4
BTG2
LMCD1
MOBP
SHC1
FAM174B
RNASE6
C9orf85
FLAD1
CKS1B
LRRC2
OR5AR1
EDDM3B
POU5F1
GAD2
SLTM
ZFHX3
FBXW11
GRK6
ABHD17B
DMXL1
TALDO1
ETS1
DNMT3B
TNNI3K
SHISA5
FRG2
NANOG
TREX1
SMPD1
UGT1A6
ZNF436
KLHL7
RNASET2
SCGB3A2
GLYATL1B
MED12
IL2RG
DDX17
ABHD11
HESX1
HOXB1
KDR
LZTS1
RASGRF2
PMEPA1
SLC7A5
CBFA2T2
HSCB
CHEK2
ZNF398
TRIM2
MRPL20
NADK
PPP1R16A
ENSA
NFE2L3
FGD3
FGD4
GBX2
GLRA1
ZNF775
DDX43
FOXH1
KIF5C
HOPX
VCAN
FGFR2
WFDC8
PSMD9
HPD
ITPRID1
ZNF343
RCN1
TRAPPC8
ETV4
COL23A1
GOLGA6B
GLI2
GAS1
CCDC200
NAA50
ATP6V1A
LDB2
SNX16
NCDN
KIAA0319L
SALL4
ART1
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
FZR1
GNAI1
PPP1R16B
RPS24
BUB1
GNAI2
CER1
CELF4
IER5L
STON1-GTF2A1L
LHPP
GSX2
CYP1A1
TEKT3
TMEM70
DAGLB
TRIM48
USP44
GADD45G
ZNF18
SCN5A
ICMT
HES3
ATP8A2
MYSM1
TRIM24
FIGNL2
CSAD
ADAM28
FAM120B
GPRC5B
CDC14B
PHF5A
ACO2
FZD8
LY96
ZNF740
SYBU
LCA5
LIN28B
FBP1
PRKG1
FOXP4
FGF2
C1orf127
MTRNR2L2
MSH3
DHFR
KMT2B
GOLGA6C
MFHAS1
PARP1
PALM2AKAP2
PTBP2
LIMCH1
DDX46
ZCCHC3
C20orf96
ATF4
MKRN1
SNURF
GCNT2
TESK2
CYP2S1
IL34
TMEM63A
SLA2
RIF1
SOX5
PSMG3
PUF60
ZBTB40
FRAT2
FOXP1
APBA2
PBX2
GPSM3
MCCC1
LEFTY1
CYTH2
KIFBP
CDC42EP3
RNF220
TRIP4
PCLAF
MRS2
SGMS2
PHLPP2
FOXA2
NFE2L1
FBXL19
DLL1
SAMD5
FBXO40
MMACHC
SGPP2
PRDM14
MIEF1
WDR55
DND1
ECE1
HOXD11
IQCH
AAGAB
CRH
MDN1
PYGB
ZEB2
SLC35A5
DHDDS
ATG3
SALL3
TMEM41B
AMN1
RASA1
FZD2
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
CREB5
LRRTM3
SLC2A14
ZNF532
SPIC
NOTCH2NLC
SNAPC3
SORBS2
ZFC3H1
THAP2
P2RY12
PRSS48
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
ITPRIP
CDH18
DDR1
GJA1
MBNL2
SMAD3
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
RFX4
LARP1B
MAD2L2
EOMES
SCAF4
TMC5
MID1
H3C15
H3C14
DNTT
ALDH1A2
DCAF4L1
SLC30A9
PREX2
SYT2
TOMM40
DRAXIN
THOC3
GABRB3
UNC13B
FOXB1
VOPP1
ST18
POSTN
CRYAA
CRYAA2
BEND3
PDCL
MORF4L2
TUBB
MDC1
DPH6
DUSP29
DHX32
WBP1L
SOX14
OR5K3
SASH1
CEP41
DGLUCY
EAPP
CHFR
CPA2
COMMD7
PCBP1
TGIF2-RAB5IF
TGIF2
EBF2
SH3GL1
CHAF1A
NDUFS5
AASS
SH3BP4
BFSP1
FAM200B
ANAPC4
ONECUT2
LIN28A
MLEC
KIAA0895
FAM180A
UQCRHL
SULT6B1
NRROS
KCNN2
TPH2
MTM1
ASXL3
CDYL
KNDC1
C1orf100
ZNF335
OR6A2
CCBE1
EEF1A1
GDF3
LRRTM4
MANBAL
SEMA6D
CA6
SEPTIN5
CAPRIN1
SIN3A
PSORS1C2
FEZF2
PIN4
L1TD1
TCF7L2
WDFY1
TES
SMYD2
SRCIN1
WDFY2
EXT1
BICD1
HMOX1
TMPO
GABRQ
ZSCAN10
TIMP4
LIMK2
SMIM32
GPR31
TRIB2
IGFL3
FOXD1
KLF5
CARHSP1
NEBL
SRSF7
PPEF2
OLFML3
HBG2
HBG1
MOG
LMNA
IFT80
RTN4
GET3
ATXN3
BOD1L1
ADA2
CNN3
ACVR1
TBC1D16
ARIH1
AK4
ZBTB45
TIAM2
PHRF1
SLC39A8
SCARB1
NDUFV1
WEE1
KDM2A
TRPM1
PEAK1
HMG20A
CCDC130
NBPF15
GCSAM
TJP2
SLC36A2
PAK1
PSME3IP1
MAST4
PRRC2B
STK31
ZNF781
ABO
UGT1A7
SERPINA1
KLHL3
ISOC2
TTYH1
USP7
PRODH
LOC102724788
SENP2
NDST1
KLHL6
CACNA2D1
INO80D
WDHD1
SOCS4
PCNX2
WDR49
SYN3
IL17RD
SLC46A1
PALLD
SEPTIN9
CCDC9
RASAL2
LRIG1
DST
ZNF304
AHCYL2
ANK2
DENR
VIM
UBQLN4
RAB25
PLSCR4
LAMTOR2
DUSP12
SPIN1
GPR85
C10orf95
NDUFAB1
CCAR2
C8orf58
GTF2I
TPST2
TNC
KIF6
SMN2
SMN1
PYCR2
DDX3X
CUEDC1
PGPEP1
MFSD13A
RBFOX2
PPP2R3A
PNRC1
GMCL2
AEBP2
CAPN3
SNX19
CITED2
TMEM167B
TACC2
CHN2
KCNJ1
PHAX
ALDH7A1
ZNF34
RGS3
SEC22B
EFNB2
NRBP2
SLC66A2
DOK7
SOCS5
SINHCAF
CHRNA1
UNK
H3-3B
PACSIN2
AKIRIN2
KLF7
PTAR1
ZNF536
DACT1
NUAK1
STRA6
PXMP4
TNFSF8
TTC13
ARV1
KCNMB4
PITPNM2
PARP16
FOXI3
HSBP1L1
MT1HL1
KRT8
OAZ2
ABCB5
SLC34A1
PFN3
MAST1
ADAR
LEMD2
TMEM47
VANGL2
DET1
APELA
H2AC19
H2AC18
LRFN5
ABL2
ESR2
TBC1D14
TPCN2
CAMTA1
EMSY
TMUB2
TFAP2A
ZNF296
GEMIN7
RBM22
FAM24B
RSPRY1
ARID3B
SHF
TSKS
AP2A1
PSIP1
ROR1
EPHB3
CHD6
FZD5
FXYD5
CCN3
UFD1
CDC45
NECTIN1
KCNIP4
NOTCH2
FUS
TRMT10C
FXYD7
CFLAR
FYN
ZNF565
KDM3A
HHIP
EPB41L1
KLF3
CSK
URGCP
IRAK1BP1
UBAP2
CCN2
PDE1B
REV3L
AASDH
CTBP2
SOAT1
DIDO1
FAM98A
AUH
NEUROG1
ST3GAL6
RTBDN
RAB15
SIX2
GID8
BTBD10
TRIM28
CCL26
GLDC
ZIC4
ERVH48-1
EYA1
TNS3
RARB
PHC2
CST1
SLC33A1
CXADR
NPSR1
ANXA2
MYCL
CLPB
ZBTB18
TMEM43
MVB12A
CHCHD4
PADI2
TIAM1
PRKAG2
PDIA4
TENM4
FAM20A
INSM1
FAM219A
DNAI1
ZNF600
TRPC4AP
SLAMF1
KANSL1L
VPS37B
ETV6
SLC3A2
ZNF674
SLC23A2
TFE3
ADGRL2
TSPAN14
ZNF649
SMIM14
PLAAT4
SLFN12
SYNDIG1
FOXO6
ATXN7
DPPA4
ZNF195
ZNF517
RPL8
SHANK2
KCNA4
NAA30
TCF4
BCL9
TEAD1
ATP6V1G1
ZNF664-RFLNA
ZNF664
SOX13
CCDC92
SUCO
TCP1
MRPL18
AGK
TSPAN13
RMND1
ARMT1
HNRNPA3
COL4A2-AS2
FAM227B
PXDC1
SOX4
NUAK2
ZNF875
B3GALT5
ZMAT2
INTS9
HMBOX1
ARL4D
TLE1
STOX2
URGCP-MRPS24
F11R
PLA2R1
CDH10
TUT1
MTA2
PCDHB5
SLC25A36
CHMP7
BCAT1
MAGEB2
LBP
AFAP1
NEUROG3
PGBD5
FAM107A
UHRF1BP1L
TAF13
MBD4
IFT122
CNOT11
ARHGAP42
WDR36
LRAT
KNTC1
SDK1
MSANTD4
CERCAM
RASSF8
BST2
FRY
NOTCH2NLB
NOTCH2NLA
ZP2
TJAP1
NBPF19
EIF4A2
MBNL1
MMP10
FAM153B
PDGFA
RNASE9
PKIG
TNRC6A
MTHFD1
TET3
ESX1
OPN5
HSF2
LRRC47
RIC8B
ABCC10
DISP3
VASH2
PDE4D
UAP1L1
SAPCD2
NBPF26
NBPF14
RAPGEF5
PARN
BFAR
FMN1
TBC1D23
CNGA1
STMN1
MEIS2
TBC1D1
SFRP1
S100A16
NUP160
PDHA2
DUSP1
ZSCAN9
SLC16A13