ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407084 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◣ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMCO1
MTF2
FAM227A
CBY1
IGF2BP2
NDUFB5
MRPL47
NAV2
LTBP2
KRT31
PADI2
THOC3
RPGRIP1
MYEOV
SYNE2
LIMK2
DDX17
MCCC1
CDKAL1
ITGB8
VWCE
PLPP2
CDC42EP3
MED25
FUZ
OSER1
PYCR2
IQCH
AAGAB
PHF5A
ACO2
NEBL
RFC4
ANKRD35
SVIL
OR7C1
OR7A5
OR7A10
WDR74
STX5
BCAS1
MAST4
ERG
COL17A1
SERPINA1
SLC9A8
CAPNS2
PTMA
KMT2B
KIAA0040
KLHL6
JUP
SH3BP4
RABGAP1L
ST6GALNAC2
HES1
ZSCAN2
RBFOX2
GALNT10
TMEM63C
SYT2
HMGB1
ZNF335
ZNF37A
PXMP4
CDH13
NTN5
NIBAN2
TTC39C
LFNG
RNF31
PSME2
EMC9
PSME1
KRTAP3-2
KRTAP3-1
SMCP
CYP24A1
PLA2G6
HERPUD2
ZNF608
ZNF436
KIF6
NRP1
ZC2HC1C
ACYP1
MLH3
F11R
CEP20
ETV4
PTPRB
FXYD3
PSG1
PHYHD1
MTMR1
ACP6
MANBAL
RFLNA
STK31
RIN3
ZNF609
UACA
CNP
CYB5A
UGT3A2
FGF12
FGF2
LRRFIP2
OPHN1
TJAP1
PHLDB2
LGALS14
NTF3
ANKRD33B
TAF12
DYRK1B
CLUAP1
C16orf90
FBL
VIT
LRRC72
SOAT1
LMCD1
EVA1A
CUEDC1
CCDC57
CNKSR3
SRGAP1
SLC25A5
ANKRD1
TAGLN2
ARID2
KLHL38
TRIOBP
ETAA1
NOL12
TRIM2
POLR2M
NRARP
PER2
PMEPA1
DST
LYRM1
DCUN1D3
GSC2
ABCC1
SOCS3
SERPIND1
NOL6
VWA5B2
ECT2
ALPK2
HNF4A
HMOX1
KRT86
SLC10A1
IFRD1
GRK6
ZDHHC3
EXOSC7
SLC20A2
TMEM205
CCDC159
RAB3D
TEAD4
PHACTR2
TM9SF1
KLHL24
IPO4
SLC2A5
OTUD7B
TUT1
MTA2
CYP1A1
SIPA1L2
UNK
H3-3B
FOXJ3
ROS1
TMCC1
PLA2G4B
JMJD7-PLA2G4B
JMJD7
YLPM1
OLFML1
CCT2
ATXN7
THOC7
BAHCC1
MMP10
TGFBR2
SLC9A1
TJP2
POLDIP3
ATP8B1
KIF13A
PARP16
CHRNA9
MKNK1
MOB3C
MIDEAS
LTF
PPP1R13B
ITGB4
C11orf86
NOTCH1
ELAPOR1
C1orf194
SMCO2
MT1F
MT1B
CTSV
CPNE2
ZNF503
GPRC5A
NOTCH2NLC
NDST1
NOTCH2
GRAMD1C
ENKUR
PRDM2
CHST12
HGS
ARL16
PLEKHG1
MYH9
ACP3
SPRED2
TRPV4
MAP3K2
ARNTL
ARHGAP10
SYNGR2
MTBP
MRPL13
SOX2
DNAH5
RMDN2
CALHM4
C1QTNF7
PTPRS
FAM89A
MFGE8
BCL11A
CHD8
FBXO27
FBXL19
SLC16A13
SLC16A11
HDAC9
ZNF148
OSBPL9
SINHCAF
MTHFD1
FAM168A
NINJ2
SYCP2
FAM217B
TMUB2
ONECUT3
CEP63
ANAPC13
TMEM255A
CDCA4
SLC35D2
LNPEP
EAPP
GGT1
OTULIN
KRT6A
GABPB2
EP300
FAM72C
FAM72A
ID1
SOX21
CEP41
TSNAXIP1
RANBP10
TPCN2
ATXN1
MAMDC2
SDC1
ICE1
TRMT2A
RANBP1
SPTLC2
SH3D19
SELENOI
ADGRF3
OGA
SPRY4
SORT1
ME2
SRBD1
KLHL13
SAR1B
SRSF7
PXDC1
NOTCH2NLB
NOTCH2NLA
PTHLH
TMEM260
KCNMB2
NKD2
SPHK1
UPK1B
FGD3
SIX2
SLC33A1
ITGB6
FHL2
LCA5
OAZ2
MTHFD1L
NDE1
MARF1
OR1K1
PIN4
CA12
JPT1
C18orf25
TBPL2
TNRC18
LOC100129484
ETV6
RAI14
PIGX
CEP19
CNTN1
WDFY2
ERVH48-1
CCL26
STN1
SFPQ
MUS81
CFL1
NAALADL2
POMT2
GSTZ1
UBQLN4
RAB25
LAMTOR2
SAV1
CMYA5
UGT1A6
PRMT5
TRERF1
ZBTB40
EPHB3
MRPL33
HAO2
ZNF117
NPIPA8
NPIPA7
DDX59
AHSG
CD2BP2
AKAP6
DENND2B
AKIP1
ZNF106
SNAP23
RETNLB
SIRT4
TFB1M
FAM72B
PDIA4
ABLIM1
LYPD5
MSMP
MALT1
SECTM1
ABCC10
ANO3
CTNNA1
LRRTM2
GET3
GREB1
CELA3B
INPP5D
RNF152
DNAJC16
CASP9
ELFN2
PELATON
CSRNP2
GRAMD2B
NDUFS8
LRP11
SLCO1B3
SGTB
NLN
TGIF1
E2F1
PADI4
DSG3
ZFHX3
CEMIP
TUBB
MDC1
TMEM258
FEN1
WEE1
TNFAIP2
ATP6V0D2
PTPRF
TMEM212
WDPCP
VARS2
GTF2H4
LTA4H
MAPRE2
FAM83A
CERS3
G3BP1
CFAP20
FURIN
KRT13
C10orf67
DENND1B
GDA
S100A16
S100A14
CYTH1
CLIP4
PCTP
CYP2S1
ZNF34
AKIRIN2
SMAD5
LGALS9C
CPSF4L
GNAL
CHMP1B
CBLC
TMEM221
LRRC25
SLC25A47
KLF5
MOV10L1
ETV1
ARIH1
MTUS1
SULF1
TOMM40L
APOA2
ARHGDIB
SENP7
KIF22
ZG16
OTX2
DGLUCY
ZNF57
VDAC2
RDH14
ZFAND3
EML2
PEDS1-UBE2V1
PEDS1
TRIM48
ADAM28
NDUFS2
ADAMTS4
FAM219B
EPM2A
UFD1
CDC45
TIAL1
LIN28A
FOXN3
PPP1R10
MRPS18B
ATAT1
TPM1
PLS1
PPP6R1
PYGB
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
RIPOR1
HID1
GUK1
WDR36
PLEKHG3
MORF4L1
KRT19
KRT15
OCIAD2
PLA2G2F
APOBEC3B
MLEC
SSUH2
SENP8
MYO9A
RCOR1
NRL
DCAF11
SMIM35
TMPRSS4
ADAR
CLDND1
SPO11
PRRC2B
LRIG1
CHST6
SHISA7
DGKH
UBB
KDM2A
ETV5
RHOBTB2
ZFR
UBE2L3
RIMBP3C
RIMBP3B
PTPN2
PRKACB
CTNNAL1
EPHA2
NOS3
RPL27
IFI35
CDR2L
RSU1
ZNF304
PIF1
ITGB1
DNAJC21
BRIX1
DLG1
RBBP8NL
MED9
PRKDC
MCM4
TRMT12
LGALS9B
PNKD
SLC12A7
VPS37C
MLLT11
CDC42SE1
NRDE2
HTR3D
ARSG
SLC16A6
ACAP2
PIP4P1
OSGEP
APEX1
IKZF3
KLRK1
PEMT
IGFL3
RASAL2
HEXIM2
ZDHHC5
LOC105370980
UQCRQ
LEAP2
GDF9
PTK2
ID3
TOMM40
PIK3R3
MEIS3
ZBTB7C
OTOGL
TCF3
LCLAT1
NAAA
RLF
RPL6
TTC6
FOXA1
PTPN11
C18orf21
BCL2L1
ECE1
CAPRIN1
CNN3
CCAR2
C8orf58
CYREN
FAM220A
ID4
IL1F10
ZNF76
CPT1A
SCOC
CLIP1
EFHC1
ARHGEF19
LBH
ZBTB20
DLX5
GBA
TNFAIP8
NOX4
SUV39H2
GADD45G
ANKHD1-EIF4EBP3
ANKHD1
EXOC5
AP5M1
MERTK
OR10V1
CLDN12
CCDC9
ECH1
AQP8
SYTL5
H2AP
CA6
MOG
CCL24
RIOX1
NAA40
ERLIN2
ABCC5
C9
GUCA2B
H3C15
H3C14
H4C14
H4C15
CYB5R2
ZNF80
CAPN13
LDAH
SSBP1
RBM25
SGPP2
FOXO6
DPP3
TMTC4
NEK10
ZFP36L1
MCTS1
IRX2
C5orf38
CSK
CXCL5
APBB2
ALK
KLK13
CASTOR1
SLC25A11
RNF167
PFN1
GP1BA
TM4SF1
PYM1
DGKA
ADGRG7
SH3PXD2A
EMP2
CALM1
FMNL2
KBTBD6
PARP2
CCNB1IP1
FAM91A1
GSTP1
KIAA0930
RNF113A
NDUFA1
ICA1L
DKK3
ZNF286A
SNRPE
MMP13
CHD6
ZNF77
LPCAT2
TBX4
EXOC6
CLDN10
RNF11
RIPK1
ADNP
ZNF710
B4GALT1
TBC1D23
ERV3-1-ZNF117
ERV3-1
LAMC1
KRT9
KRT14
GPR158
ATP1A2
HMGB4
PTPN1
MYPN
XCR1
GSN
KCNN2
UPF1
ITPK1
CORO1C
TUBA1C
TMC1
SPAST
SFR1
ROPN1B
CLDN1
CELF3
RIIAD1
SDCCAG8
CEP170
CLDN4
C22orf15
METTL9
ZNF70
VPREB3
AHNAK
KLHDC8A
GOLGB1
FCHO1
OGT
LOC100509620
GPR137
ASXL1
MUC13
CYS1
CRYGB
ZSCAN9
LGR6
ITPKB
RAC3
ALCAM
CENPX
LRRC45
PPIH
SNRPN
SNURF
DNAJB1
TECR
S100A6
CRKL
BUB1B
PHB2
TRIM29
PARD6B
NTSR1
SLC7A5
SHANK2
TMEM107
MNT
NFAT5
CEP120
STK24
IL1R2
GUCA1C
LIMA1
MOBP
SPAG9
SCD5
TMEM139
CASP2
YDJC
CCDC116
CLOCK
SLCO1B3-SLCO1B7
SGMS2
TTC13
ARV1
ANO1
PCID2
CUL4A
FBXO48
APLF
ACOT2
NFIB
TBC1D17
AKT1S1
PNKP
PLSCR2
ZNF268
FAM3C
COL21A1
CAST
PAWR
GAST
MMP20
MLPH
ITGBL1
MEIOB
CNOT11
SMARCC1
SMIM3
BCL11B
STRN3
AP4S1
RAB40B
EMSY
DDAH1
HEXB
CBX1
MAP3K9
SPAG4
PPP1R9B
VPS50
HEPACAM2
TASP1
WBP1L
SLC25A36
HLTF
MYOF
HERC5
TRAPPC6B
PNN
KIAA0319
CCR4
HACD3
FETUB
TRIB2
DSP
PACSIN2
DACT3
PPP1R12B
RGS2
SLC45A4
YPEL5
CCDC130
LEMD2
CLEC9A
XAB2
STXBP2
PCP2
GJC1
CRYGD
RNF13
ACVR1B
CRYGC
PLXNB2
MFN2
FOXP1
DDR1
SLC26A9
AGPS
GUSB
CACHD1
CELSR3
PGM2L1
CCT7
MAST2
HMGCS1
PRRG4
TGM4
EPB41L1
CRISPLD1
GDF5
CEP250
COX8C
COPS7A
CCDC174
VRK2
TMEM88B
ANKRD65
SDR39U1
SPRR2E
LOC388282
MFSD2B
UXS1
HEXIM1
SPINDOC
ARID1A
R3HDML
RARB
FAM193B
CCDC80
KCNJ15
DDX58
PZP
TRIP4
PCLAF
SLC2A8
ANXA3
BTG1
RBMX
SLC7A11
TMEM87A
GANC
ZNF250
ARHGAP36
PCBP2
ETFRF1
CFAP94
CYP19A1
ST3GAL5
SHC1
FLAD1
CKS1B
LMNA
MEF2C
SH3GL3
AGPAT3
SDHD
UHRF1
DHCR24
TAF1L
MRPL1
MTA3
PAQR8
KCNG3
SRRD
HPS4
KRT16
RGS22
GSDMC
GDNF
DNMBP
METRN
ANTKMT
FBXL16
FAM72D
ATAD3A
MRPL16
TRAM1
NGDN
KCTD4
KRTAP17-1
KRTAP16-1
ARFGAP3
SPATA12
OARD1
NFYA
RBM47
RFX1
RDX
RNF216
GJB1
ZFC3H1
THAP2
MATR3
DOCK5
GTF2H1
CSTF1
AURKA
HPS5
PF4V1
CXCL6
UFSP1
ACHE
DUSP1
BIN2
SLC25A25
HNRNPL
NAIF1
MEF2A
APOLD1
FBXO32
FER
TAGAP
ZBTB33
GZMH
TESK2
MMACHC
PSORS1C2
ANKUB1
CTSB
MPP3
CD300LG
CDSN
WFDC8
DHX8
FNIP2
RTRAF
GALK2
ANXA11
RPS6KA1
COPS2
MGAT5B
LY6L
GFM2
PTGES2
CEP85
SH3BGRL3
MIOS
C1QTNF1
SERINC5
ESRP1
PRR15
SOX14
SRP14
PEX12
AP2B1
SH3PXD2B
CLRN1
TBCCD1
DNAJB11
ZNF688
IFT52
CHADL
NOX5
SOX13