ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
LOC102724770
DGCR6
ITGB8
PIGX
CEP19
SMCO1
MAMDC2
KRT31
PYCR2
CCDC38
AMDHD1
HES1
MANBAL
COL17A1
PAMR1
MBNL1
NDUFB5
MRPL47
THOC3
BTBD3
SOX2
CAPNS2
LMCD1
CDKAL1
VWCE
SDK1
NAV2
CPSF4L
FJX1
GRK6
OLFML1
PCCA
LYRM1
DCUN1D3
RPGRIP1
MTF2
RFLNA
ABCC1
ARSG
SLC16A6
F11R
EVA1A
DUX4
TES
TNRC18
LOC100129484
MMP20
CCZ1
GADD45G
LCLAT1
LIMK2
ZNF775
MAP3K7
PTMA
ANKRD1
CYP24A1
VIT
HMGB1
MED25
FUZ
SLC20A2
ZNF770
CYP1A1
PXMP4
NWD1
ZNF341
SMCP
PSPH
CCT6A
KRT16
CDC42EP3
SGPP2
ITGB4
FAM227A
CBY1
KIF6
SSR3
KMT2B
GUSB
MANSC1
BORCS5
SYT2
ANXA11
LBH
HGS
ARL16
TM4SF1
HERPUD2
TAGLN2
EPB41L1
PLPP2
GOLPH3L
RAG2
IFTAP
ARID2
CNP
ARID5B
ALPK2
PLA2G4B
JMJD7-PLA2G4B
JMJD7
ZNF503
PPP1R13B
NFE2L2
FXYD3
FGD3
TM4SF20
UNC13B
NOTCH1
MEOX1
BCL2L1
SAXO2
EFL1
ERLIN2
WDR74
STX5
PLSCR2
SH3PXD2A
UGT1A6
ACVR1
CHST6
NME1
ETV1
DDX17
CEP41
CYP2S1
TNXB
C4B_2
C4B
FBXO27
CUEDC1
PPP3R1
DST
WDFY2
TRMT2A
RANBP1
CYP21A2
C1QTNF7
CDR2L
PHF5A
ACO2
SIPA1L2
LOC391322
CEMIP
CTSV
CHSY1
KIF13A
RNF13
GAST
JUP
BMP7
TMEM17
ADH7
ZNF608
FAM102A
ZBTB34
ABCC10
IGFBP2
FCHO1
SNX31
SCPEP1
PSG1
ST6GALNAC2
SPDL1
TJAP1
MMP10
TMEM132A
LAMP1
SMAP1
IQCH
AAGAB
ZMYM1
OGN
ETV4
NDE1
MARF1
IKBKB
SERPIND1
SMCO2
ZSCAN2
HOPX
NOS3
AGPAT3
PER2
LCA5
CORO1C
UBTD2
PYGB
TRIM2
IFRD1
CYTH1
IFT80
MNT
TPM1
SMC4
SAR1B
NFIB
ALK
NIBAN2
PLD1
PLEKHG1
SEM1
HOMER2
NINJ2
MARCKS
SUN1
KANK1
SLC25A25
NAIF1
KDM5B
RNF183
AADAC
KCNN2
PHACTR2
ZNF423
SLC7A5
CLDN4
SDC1
PPDPF
ABHD11
SIX2
TCP11L2
SEMA3D
DDX5
CEP95
POLG2
ARNTL
NUP153
MTMR1
KIF14
ID1
ABCC2
EHF
SPAST
FOXN2
LFNG
SMAD3
SNRPE
DGKH
SLC2A8
CNTN1
TMEM200B
TLK2
FIGNL1
IER3IP1
TUT7
LRP11
MAPKBP1
HDAC9
EXT1
MMP11
CHCHD10
RMI1
HNRNPK
LGALS7
NAA35
DENND4A
ZFAND3
POLR2M
MS4A2
CCT2
GALNT11
ADGRL1
THG1L
LSM11
SMARCA2
DUSP1
DHX8
MAST4
LPP
CSTA
BST1
SHF
DYNC2I1
ESYT2
NRCAM
MCCC1
PTPRB
YEATS2
UACA
TUBA1C
OGA
POMT2
GSTZ1
CAMKK2
NKIRAS1
NR1D2
STK3
OSR2
FDXACB1
C11orf1
ALG9
PTCHD4
KCNJ15
LRRC18
FOXP1
P2RY12
DMRT2
P2RY13
CCDC200
RDX
DAGLB
TBC1D2
ERG
KRT86
CHST12
GSTO1
SLCO1B3
RABGAP1L
TTC39C
GGH
SLC44A1
IBTK
BFSP1
UAP1L1
SAPCD2
RNF152
CYP3A7-CYP3A51P
CYP3A7
MMP13
VDAC2
PPP1R10
MRPS18B
ATAT1
MNAT1
MPP3
CD300LG
TMUB2
SMARCAD1
KRT74
CAPRIN1
KLHL6
KRTAP3-2
KRTAP3-1
ONECUT2
CBX1
RAP1A
GPR87
ADAM28
UNK
H3-3B
MUS81
CFL1
BAHCC1
VGF
NPIPB12
ACYP2
PSME4
TRPV4
GPC1
ZNF436
ZCCHC3
C20orf96
SNCA
TP53AIP1
EMP2
SPIN1
RPL27
IFI35
RBM39
KIAA0040
PGAP4
OTOGL
C3orf20
EIF4A2
UBR2
LAPTM4B
PEDS1-UBE2V1
PEDS1
SPTSSA
FGF1
GET3
CCL26
HMGN1
UNC5A
CEP20
IL1F10
KIF22
IL36RN
ZG16
CD44
OR5K3
OR7C1
OR7A5
OR7A10
DLGAP1
TJP2
NTN5
NELFCD
EFNB2
SYNCRIP
S100A6
SH3BP4
TRMT1
NACC1
PMEPA1
LRRC72
CHD1L
PRKAB2
CLSPN
FMN1
CTTNBP2NL
FGD6
VEZT
TMX2
MED19
N4BP1
TACC2
OSER1
MSMB
LDLRAD3
CHD6
KLHL38
CDH13
RAPGEFL1
DLX5
EGFR
DUSP29
ZDHHC3
EXOSC7
CCDC57
ETFB
GOLGA6C
ABLIM1
RFWD3
MAP11
BAG3
LAMA1
LAMTOR4
NACA2
KIF21B
IGF1R
CPN1
MSANTD4
GDF5
CEP250
HSBP1
SYCP2
FAM217B
TEX26
WDR49
MUC20
PHF20
SLC9A8
CLNS1A
ART1
ZFC3H1
THAP2
ECT2
LSM5
AVL9
SLC9A9
PARP8
KLF5
POLB
TMEM139
CASP2
ACTR2
ZNF703
LCE3B
LCE3A
SLC7A11
MERTK
UBALD2
CTXN3
ISL2
ETV5
CLUAP1
C16orf90
LRRFIP2
CES3
GRAMD1C
SMIM11B
SMIM11A
CDIN1
NPIPB8
COL23A1
ESRRA
CATSPERZ
ITPKB
ADRM1
CLDND1
KRT13
H4C3
H1-6
TAL2
RAPGEF5
S1PR3
C9orf47
DGLUCY
PRDM2
TNFAIP8
ETFRF1
CFAP94
ETF1
NT5C2
KDM2A
NAAA
SCNN1A
LTBR
CTDSP2
SOST
SYBU
BCL3
DDR1
CHMP4B
FNIP2
KRT19
KRT15
WWTR1
OPA1
SLC6A2
ID3
DMRTA2
STEAP3
ADAM18
ETHE1
PPP2R3A
NFATC3
PIN4
GRAMD2B
TCF12
PNKD
TP53BP1
SGTB
NLN
METTL7A
EXOSC2
MCM7
AP4M1
MTRNR2L8
ARHGEF19
GGT1
GSN
ABO
SERPINA1
CRISPLD1
ACSS1
TMEM138
CYB561A3
SPRED2
SNAPC3
FILIP1L
CMSS1
VRK2
IQGAP1
COLGALT2
PDC
MTHFD1L
RABGAP1
ZNF609
MYH11
MEF2C
ZNF277
DOCK4
OSCP1
SLC6A1
CERS3
RIMKLB
ALDH3A1
ZBTB40
KLHL5
TMEM254
PELO
ITGA1
TJP1
IGFL3
LNX1
HNRNPUL1
PALMD
GPAT4
SFR1
CNN3
MTUS1
TP63
CASD1
SIX4
SPRY4
EAPP
TSKS
AP2A1
RNF43
RBBP9
TTF2
POLR3E
SEC23B
AHR
PCYT1A
STK31
C1orf105
DSC2
UFD1
CDC45
BCAT1
SPO11
TAF1L
NPIPB13
DNAJB1
TECR
MME
KMT5A
LTBP2
SFXN1
RBM47
CELA3B
SLC25A28
GNA13
CD163
ESRP1
SPTLC2
IL1A
IGFL4
NPIPA8
NPIPA7
ZFR
FAM83G
ANTXR1
SOD3
PDIA4
CYB5A
BCO1
PCYOX1
TIA1
CCDC43
EHD4
HLTF
HBP1
REXO2
CC2D1B
IGSF3
TTC7A
MCFD2
COL7A1
ERAP1
TPST2
ABTB2
SCOC
PROSER1
NHLRC3
LOC100505841
SYNGR2
AMN1
COA6
KIF23
C12orf43
TGIF1
KIAA1549
SLC25A11
RNF167
PFN1
GP1BA
XPA
BCL2L13
STARD7
OTOP3
ATP6V1E1
STON1-GTF2A1L
STON1
CAV1
CAVIN1
PLCB4
RTP1
IL10RA
PHAX
ALDH7A1
ZMIZ2
SMAD5
ENAM
SGK3
MICALL1
TUT1
MTA2
REST
CDX2
TMPRSS11E
NES
NR5A2
DPPA5
TERF1
SMAD7
SACS
SOX6
FRG2C
PLAGL1
ARHGEF38
CADPS
PIPOX
OTX2
SOX21
ZNF483
METTL11B
DNMBP
LRRC10B
MUC4
MUC1
CACHD1
DUSP6
AGO1
ZBTB8OS
RBBP4
NRG1
ATP1A4
APOBEC3F
NTRK2
TCF7L1
RMND5B
URM1
RIPK1
PIM2
GOLGA6D
CD99L2
FLVCR1
BDH1
SFRP2
LRRN1
MTRNR2L1
VENTX
UTF1
BCOR
TENT5B
LRRN3
MUC3A
FAM222B
TARS1
SOCS3
SERINC5
GIMAP5
SHCBP1L
SPATA45
PPBP
PF4
SGK1
GDF11
PHC1
CD82
SSB
MFSD4B
SNRPN
PRICKLE1
CLDN9
OBI1
KIF21A
CLDN6
TDGF1
ZSWIM3
ACOT8
SAMHD1
RPH3A
SRRM4
BTG2
MOBP
SHC1
FAM174B
RNASE6
C9orf85
FLAD1
CKS1B
LRRC2
OR5AR1
EDDM3B
POU5F1
GAD2
SLTM
ZFHX3
FBXW11
ABHD17B
DMXL1
TALDO1
ETS1
DNMT3B
TNNI3K
SHISA5
FRG2
NANOG
TREX1
SMPD1
KLHL7
RNASET2
SCGB3A2
GLYATL1B
MED12
IL2RG
HESX1
HOXB1
KDR
LZTS1
RASGRF2
CBFA2T2
HSCB
CHEK2
ZNF398
MRPL20
NADK
CELF3
PPP1R16A
ENSA
NFE2L3
FGD4
GBX2
GLRA1
RIIAD1
DDX43
FOXH1
KIF5C
VCAN
FGFR2
WFDC8
PSMD9
HPD
ITPRID1
ZNF343
RCN1
TRAPPC8
GOLGA6B
GLI2
GAS1
NAA50
ATP6V1A
LDB2
SNX16
NCDN
KIAA0319L
SALL4
LEFTY2
ZYG11A
TUBB2A
GOLGA6A
FZR1
GNAI1
PPP1R16B
RPS24
BUB1
GNAI2
CER1
CELF4
IER5L
LHPP
GSX2
TEKT3
TMEM70
TRIM48
USP44
ZNF18
SCN5A
ICMT
HES3
ATP8A2
MYSM1
TRIM24
FIGNL2
CSAD
FAM120B
GPRC5B
CDC14B
FZD8
LY96
ZNF740
LIN28B
FBP1
PRKG1
FOXP4
FGF2
C1orf127
MTRNR2L2
MSH3
DHFR
MFHAS1
PARP1
PALM2AKAP2
PTBP2
LIMCH1
DDX46
ATF4
MKRN1
SNURF
GCNT2
TESK2
IL34
TMEM63A
SLA2
RIF1
SOX5
PSMG3
PUF60
FRAT2
TMCC1
APBA2
LINGO1
PBX2
GPSM3
LEFTY1
CYTH2
KIFBP
RNF220
TRIP4
PCLAF
MRS2
SGMS2
PHLPP2
FOXA2
NFE2L1
FBXL19
DLL1
SAMD5
FBXO40
MMACHC
PRDM14
MIEF1
WDR55
DND1
ECE1
HOXD11
MACROH2A1
CRH
MDN1
ZEB2
SLC35A5
DHDDS
ATG3
SALL3
TMEM41B
RASA1
FZD2
STN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
SMC6
GEN1
WNT5B
GSAP
CRYGB
LIPK
NLRP12
CREB5
LRRTM3
SLC2A14
ZNF532
SPIC
NOTCH2NLC
ITGB3
SORBS2
PRSS48
UGP2
JPT1
TRIML2
PDPN
PHETA2
NAGA
KDM2B
ARAP3
ITPRIP
CDH18
GJA1
MBNL2
APOBEC3D
APOBEC3C
ITGB5
ATG10
GXYLT2
RFX4
LARP1B
MAD2L2
EOMES
SCAF4
TMC5
MID1
H3C15
H3C14
DNTT
ALDH1A2
DCAF4L1
SLC30A9
PREX2
TOMM40
DRAXIN
PRR15
GABRB3
FOXB1
VOPP1
ST18
POSTN
CRYAA
CRYAA2
BEND3
PDCL
MORF4L2
TUBB
MDC1
DPH6
DHX32
WBP1L
SOX14
SASH1
CHFR
CPA2
COMMD7
PCBP1