ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10131662 | Bronchial tracheal epithelial cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◣ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

INO80D
MTRNR2L8
ZFX
GBA
KMT5B
FBXW4
SNX16
MT2A
SERPINE1
DDX17
MCL1
HNRNPR
ANP32B
DUSP1
TXNDC15
HNRNPA3
RBL1
ASB1
NAA38
CHD3
TBL1XR1
HNRNPUL1
HEXIM2
MTA3
GTF2I
DEK
TRIB3
DDIT4
GABPB2
CSNK1E
XBP1
FAIM
ZC3H4
SEPHS1
QSER1
EIF4G1
PUM2
B4GALT7
BAZ1B
ZNF532
SNRPB
SCMH1
RIN3
FLOT1
NIPAL2
IER3
RAD50
SSRP1
NAA25
EIF2D
ZC3H11A
ATF1
PPIA
ACVR2B
RAN
MTRNR2L2
PRRC2A
EIF5A
RNASEH2B
FABP6
SF3B3
COG4
ZNF783
CHD1
NSD1
ZNF282
DPY19L4
KMT2A
HNRNPF
ASXL1
DUS1L
BRWD1
TET3
KDM3B
ZMYND11
PRTFDC1
FAM169A
PRCC
FBXO4
HSPA8
ACTB
KEAP1
RNF220
UNC50
COA5
NFKBIA
HMGB1
ZNF407
C17orf75
TRIM52
PCBP1
TCERG1
UBE2L3
ADNP
EZH2
WDR76
YARS1
S100PBP
ELOB
ZNF22
RAD23A
SCAF8
NFYC
USP24
TGFBRAP1
HINT1
KRT17
SSBP2
BEND3
KPNB1
CBX3
HNRNPA2B1
ARPP19
CASC3
RPTOR
RCOR3
JUNB
ERAP1
ZSCAN12
MACROH2A1
GTF2IRD2B
ACBD6
TMEM268
BOD1
RPL12
LRSAM1
TUBGCP3
GSTO1
TAF4
EEF2
PRDM15
SFT2D3
DPYSL2
STAT6
RGPD2
RGPD1
SEPTIN8
RAD54L2
ZFR
C4orf36
SENP6
DDX39B
ZFP62
VPS54
COMT
PPP2R2A
PRDM5
SLC9B2
ZNF280D
POGZ
FAM228B
HDGF
PFN4
PHIP
RPS5
NSMAF
UNK
PDXDC1
ANKRD40
SFXN1
PRRC2B
EPC1
FBXL17
RPS23
ATP6AP1L
MARCHF7
AZIN1
SMARCE1
ZBTB38
LNPEP
RANGAP1
HECTD1
ZC3H7B
CXCL2
SREK1
STAG1
DERA
HMGA2
GCN1
MCMBP
KAT6A
HDDC2
VDAC1
HDGFL3
NRF1
E2F4
TLK2
ZNF444
VPS36
ACSF3
SLC38A2
BFSP1
PTBP1
SRSF6
EIF3A
ULK2
PAIP1
NAE1
KIAA1614
RPL5
TBC1D9B
GMEB2
HMGA1
LRRK1
FRA10AC1
ZBTB7A
MTMR2
SLC30A5
PPRC1
HNRNPAB
MAN2C1
ZCCHC3
PHF3
MANSC4
KLHL42
TRMU
CUL1
ARSB
MRPL28
MDM4
PFKM
SENP1
LEMD2
INO80
XPC
LSM3
UQCRH
LRRC41
CEBPG
INTS2
ZNF274
RPL11
CSNK1D
MTF2
RPL37A
TFAP4
COMMD10
SQSTM1
DENND6B
SRSF10
ZC3H6
GEMIN7
ZC3HC1
TRNT1
SELENOT
SPIN1
TRA2B
DYNLL1
SRSF9
ERBIN
CCDC71
POGLUT3
MAP3K20
ARL10
MCM3
ACYP2
FOSL1
AVEN
ELAC1
NFKB1
CEBPB
GJC1
RAD23B
GMEB1
CYB561
CNIH1
BRIX1
H4C11
CERS2
CXCL3
TSEN15
CEBPD
DDX50
EEF1A1
HSPA9
RBM15B
UIMC1
MFSD14A
ATG10
TLK1
PDS5B
RNF145
NUP153
RPL35
ARPC5L
ZNF710
B4GALT2
DYRK1A
ZNF518A
SRSF1
MRPS2
C9orf116
TPM4
STK24
GPX7
MZT2A
RNF214
PCSK7
RFX8
PHF2
BTF3
MSRB2
ATF4
SAR1B
WDR24
LAMC2
PPIF
CASD1
PIEZO1
ARAP3
ATXN10
G0S2
STX18
KDM2A
REPIN1
ZNF236
MGAT4B
PKDREJ
EIF3B
GTF3C6
ZMYM4
BCAR3
C19orf12
ARPIN-AP3S2
ARPIN
RPS2
TMEM42
EIF3E
MIER3
MSL1
RPS8
SDHAF2
CPSF7
RHOB
SMAD5
PRDM2
CCNT2
UBAP2L
C1orf43
TCHP
UBE2E3
SORBS3
PPP4R3A
TNPO1
GLUL
OCIAD1
PAFAH1B2
SMARCD2
NNT
NDFIP1
ZNF618
RNPS1
RRM1
PPIP5K2
GIN1
HDLBP
SEPTIN2
TGFB1I1
STX16
PDIA6
BRF1
N4BP2
BTBD6
CDT1
MPDZ
NKIRAS1
RPL15
NUFIP2
YBX3
ZNF441
SHROOM1
GSAP
STAG3
GPC2
CDC42EP1
KCTD15
FOXE3
TRMT2A
RANBP1
HNRNPU
ARL6IP4
SRCAP
LOC730183
ING4
KANSL1
MPPE1
EEF1AKMT1
E2F1
KDM5C
RPS4X
DOT1L
SYDE1
ZNF354B
CHAMP1
ZFAND6
PBLD
HNRNPH3
GABPB1
RPSA
SRRM2
NPEPL1
SLC24A1
INTS14
TIPARP
DNMT1
ATXN7L3B
TYMSOS
TYMS
NDRG2
TREX1
ARHGEF40
NME1-NME2
NME1
CAPN15
YBEY
MCM3AP
RPS14
HENMT1
CCNE1
IMPACT
RIF1
NFAT5
VAPA
RMI1
HNRNPK
MRPL1
DNPH1
RCN1
BEGAIN
WSB2
EDF1
DDX19B
AARS1
TEX22
GCFC2
STC2
MDK
TOB1
RBM14-RBM4
RBM14
MARCHF6
NFKBIZ
NUDC
SREK1IP1
CWC27
GATAD2B
IRF2
ARIH2
SCCPDH
SETD2
NHLRC2
DCLRE1A
TMEM17
TMCC1
MACROH2A2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PLEKHM3
RPL10A
RDH14
C5orf24
SDC1
EGLN2
GTF3C3
FBXO38
CANX
NFE2L2
RMI2
ITGA3
PXN
ALKBH3
RPS15
RPL37
ARHGEF7
TMEM68
TGS1
TPRA1
MCM2
ZNF768
BPTF
PRKAA1
DUSP16
IFNGR2
RPS7
ATE1
ZWILCH
RPL4
STS
PUDP
TSC1
GFI1B
TDRD3
CRADD
HMGN1
UBC
RPLP1
PDCD7
YWHAE
EBAG9
NCOA7
DCTD
GOLM1
ACOT2
TMEM98
KMT2D
MRPL40
HIRA
CNBP
KRCC1
BIRC3
SCAND1
CDC42
ARRDC3
GGACT
SMC1B
RIBC2
AKT1
POLG
ZNF770
CTPS1
RNF169
ZNF497
GPD2
SMYD2
TRAF3
EIF4A1
H4C12
ZNF747
ENOSF1
ECPAS
YTHDF2
AGPAT3
EP300
ZYX
SLC7A1
PHGDH
FAM131B
RAD52
LARP1
PTMA
BACH1
TFDP1
EIF4G3
CHST3
DCAF10
RPS19
KMT2B
RPS6KC1
URGCP
DCUN1D1
URGCP-MRPS24
IFIT5
SECISBP2
ZER1
TMEM168
ANXA2
KLHL9
VAMP2
HMBOX1
INTS9
ATXN7L2
EIF4E
RUSF1
SLC39A9
ERH
SMC3
SMIM15
TASOR
MTHFD2
PCNP
PGGT1B
RACK1
ODC1
CCDC102A
FAM160B1
SMAD1
AXL
TNKS
SDF4
B3GALT6
ZBTB40
AKAP10
SCLY
UBA2
UQCRFS1
FOXRED2
PTPN9
SLC3A2
WTIP
DDX6
GFER
BRPF3
RAC1
AMPD3
SIK1B
SIK1
MRPL3
ZBTB4
POLR2A
ZNF398
ZNF425
ZNF32
PSMD14
MAML1
HNRNPDL
ENOPH1
DICER1
ZBED5
ITPRIP
MPG
TBKBP1
MCIDAS
SPIRE1
ZBTB8A
DNAJA4
FAM207A
GAPDH
VWA8
ZNF341
TARS1
RDX
ZC3HAV1L
SKIDA1
MCM7
AP4M1
TOP2B
UBOX5
FASTKD5
CTCF
TMX4
ZNF496
ARHGAP21
NFIC
KHDC1
ACOT1
NAGPA
ZNF839
NRL
EIF4B
ARIH1
PCK2
UBE2J1
TK2
SAMD14
KRT7
MAD2L1BP
GTPBP2
DDX1
ADPRS
XPOT
DDX46
HERC3
PYURF
PIGY
VPS52
RPS18
MAGOHB
DYNC2I2
RHBDD3
EWSR1
TRIM44
GTF2IRD2
TAF1D
C11orf54
ATIC
LSM14A
PPP3CC
CPLANE1
FOXK1
STRN4
FKRP
AGO2
MMP14
FBLN7
ZMPSTE24
MYH9
PTHLH
CTBP2
BCL9L
ZBTB47
ZNF143
ITGB1
PABPN1
CDC7
MKNK2
TCF25
RAD21
LRRC37A3
C2orf42
ITGB3BP
EFCAB7
GABPA
ATP5PF
HNRNPD
XRCC5
HNRNPA0
OTUD4
MIDEAS
POLD2
WDR82
HLTF
SNX25
COMMD1
CCT4
SNRPD1
GDI2
SNX5
MGME1
RPL23
ZNF623
NACA
SLC20A1
ZDHHC6
VTI1A
EXOSC9
NSD2
CUEDC1
PAFAH1B1
MARK2
SMIM10L1
PRH1-TAS2R14
NGRN
CHEK1
CNOT3
NFYB
PATL1
TIRAP
ZNF629
POLR2J3
SMN2
SMN1
LATS1
AFF4
FKBP5
ZC3H7A
RNF135
UCK2
SPIDR
PPP4R1
FBLIM1
KATNBL1
CDC16
ZC3H12C
SOCS6
STAU1
SFSWAP
ATXN2
U2SURP
LIG3
RAP1GDS1
COLGALT1
SLC22A15
PITX1
PYGO1
MTA1
NOTCH2
TCF12
RWDD1
MATR3
C1orf53
MICOS10-NBL1
MICOS10
BRD2
SLC7A5
FBXL5
CDKN1A
TENT2
MYO5A
GPR150
GIGYF1
SNAI2
EXOSC6
NOTCH1
TFG
SLC35A4
APBB3
DUT
TM9SF3
RCC2
ZFHX3
PARP8
DIS3L
F3
ABR
SUSD1
ANKRD65
AURKAIP1
PABPC4
TMEM254
PHC3
NIPSNAP2
COPZ2
CTNNB1
POMZP3
BMS1
SNX19
GOLGA3
FAF2
SGK3
GADD45GIP1
UBE3C
SP1
RBM26
TRAPPC12
NCOA6
BASP1
LITAF
AXIN1
C14orf93
GADD45B
HMGN2
R3HCC1
ITGB8
EPM2A
BRD4
LPGAT1
HHIPL1
ZNF316
DNMT3A
HOXB7
EGFR
RPL22
LONP1
CATSPERD
PARK7
SDCCAG8
CEP170
POLR2M
OVCA2
TXNL1
NOXA1
ZNF717
GANAB
ANXA4
MIS18BP1
NAPEPLD
TBCA
MET
ZFP36L1
CLTC
TMEM199
POLDIP2
FBXW11
ACSL3
TRDMT1
CIPC
TNRC6A
ERCC3
ATXN7
MARVELD1
THOC7
POU6F1
ADCY3
HOXA10
MRPS30
ZNF507
ENO1
TIMELESS
SLC15A4
UBE2R2
MTHFD1L
ZNF121
SIRPA
GTF2H2C_2
GTF2H2
NABP1
PCIF1
ZZEF1
CYB5D2
NOP58
ANP32E
RBBP6
PCGF5
NANP
H6PD
LMNB1
EEF1G
XKR6
ZNF518B
MRPL24
DCAF8
TRIP11
U2AF1L5
U2AF1
ZFP1
FRG1
XPO1
HDAC2
DAZAP1
HECTD2
CREBZF
NR3C1
CAPZB
DNAJC5
IGFBP7
SOX6
C11orf58
FAF1
MORF4L1
TM9SF4
RABGAP1
NAXD
FER
TANK
SLC25A6
TMTC4
MYO1C
NMNAT1
LZIC
RPS3
AMD1
CCNC
FAM193A
PDCD6
PTP4A1
TRAPPC8
TMSB10
MTX2
FNTA
JPT2
MTLN
ITCH
PHC2
UPF1
CCN2
FBN2
KLHL5
DUS2
DDX28
SUGP1
MAU2
GNB2
LUC7L3
GOLPH3
PHLDA1
C15orf39
CTNNA1
BRD7
RND3
ILKAP
CHAF1B
OSMR
PAQR3
ZNF384
THBS4
MTX3
TUBB4B
NEK9
SLC35E2B
QRICH1
HIP1
HIPK3
CSNK1G3
NINJ2
CAPN2
SLK
GNL3L
PCBP2
INTS1
AP1G1
TCTE3
ERMARD
ZNF764
MAPK1IP1L
KLHDC4
USP40
DELE1
MBD3
XYLB
EIF4H
SDC4
ADGRA3
CTBP1
CHPT1
PWWP2B
TMEM222
TRIP12
FBXO36
SERBP1
WDR43
LRRC59
PSMD6
RFX3
SPECC1
STK11
ADO
RPL14
RBM12
CPNE1
RBM15
CHD8
DEGS1
MCM5
LENG9
KHK
PRR12
UBE2D3
ELK4
R3HDM2