ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

PAXBP1
ZMYM3
KCNIP4
CMSS1
FILIP1L
PLA2G7
BAIAP2L2
TNRC6A
NBPF1
ITPRIP
ARHGEF35
SPDYE14
SPDYE10P
SNX16
CRYBB2
ARHGEF5
MTRNR2L2
ELMOD1
MTRNR2L8
LYRM1
DCUN1D3
CLTC
KRTAP9-6
ELAVL2
SLITRK3
SLC35F3
ZNF462
TES
ITPRID2
EREG
LDB2
ERRFI1
KRTAP2-4
UBAP2L
C1orf43
RAPH1
CSAG3
COPS7B
E2F3
H2BC18
H3C13
ANXA2
SULT6B1
CEBPZOS
WASHC1
C11orf97
ACTB
FANK1
UBE2Z
SIMC1
H3C15
H3C14
APPBP2
ECHDC1
SPATA16
SUV39H2
SHTN1
CTAGE8
CTAGE4
PDLIM5
RPL8
UBC
HMGA2
ARFGEF1
IDNK
COL6A1
AREG
RAB11FIP2
TCERG1
SLC25A32
DCAF13
ANTXR1
H2BC21
H2AC20
H2AC21
HNRNPA3
DSCC1
H2BC17
H2AC17
STRIP1
YBX3
SLC35B1
SPATC1L
TOB1
KRT19
STK3
CPLX2
BCL9
EGR1
UBR5
FBXO11
IER3
EIF3F
MFSD14B
CSNK1G3
FOSL1
PCMTD1
LUZP2
MND1
VCP
NFE2L1
SLC25A3
NCOA5
CHEK1
CBX3
RAB4A
ARHGAP39
USP25
MAML1
ADAM15
SMNDC1
GOPC
GALNT10
NOTCH2NLC
SLC12A8
RMDN1
CPNE3
NOTCH2NLA
ZCCHC4
LMBR1
COMT
DTD1
CUL4A
NSFL1C
PCID2
TCTE3
ERMARD
DR1
UBE2V1
NCK1
UBE2O
AANAT
CADM2
RXFP3
ENTPD7
UBE2D1
TMSB10
ID1
MRPS26
ZFP36L1
RPL18A
ZBTB38
SLC16A5
KLLN
PTEN
BZW1
HECTD3
BRAF
VWA2
CIB2
EEF1A1
POLR2M
XPC
LSM3
SLF1
KIAA0825
TMEM71
PHF20L1
FAHD2B
KRTAP2-2
DIRAS2
GABRA4
SLC5A8
SRSF2
MFSD11
CBWD5
CBWD3
DUSP5
FH
TRIB1
FRMD3
CXCL2
SEC61A1
CBWD6
PDXDC1
LRRC58
MTHFS
MFAP3L
H2AX
WDR43
MALSU1
CEP55
TRIM26
ZNF280D
FAM8A1
CCSER1
CSNK2A2
HMGB1
HDLBP
SLTM
ZKSCAN1
RMI2
PPP1CB
FDX1
CIBAR1
TMEM43
CHCHD4
SLC30A5
FAM149A
TCF7L2
CLDND1
LRRC37A3
FAM160B1
TUBD1
RPS6KB1
FMNL2
RESF1
FAM120B
C7orf26
PHTF1
VANGL1
RECK
PARG
SCO1
ADPRM
NDUFAF6
ZHX1-C8orf76
ZHX1
FGGY
OXR1
SMC6
GEN1
HERC6
KRTAP2-3
CCDC88A
SGK3
HNF4G
RPS20
PSMC5
FTSJ3
AFTPH
H2BC11
H2AC11
GRPEL1
SMARCD2
CRPPA
ANKRD18A
EBPL
KRTAP10-12
PSKH2
NFKBIZ
GCFC2
DENND4A
ZFP3
EXOC6
ENTPD6
FAM221A
OGA
ATF1
SLC7A5
RCN2
NOMO2
FECH
NOMO3
CETN1
TTBK2
LOC100287896
LIPT2
OSER1
TRRAP
DYNLL2
ZNF800
CLN5
FBXO34
WDR1
MTAP
HEXD
NFIB
RAD21
MAEL
ILDR2
KRTAP4-5
RPS2
ZFP91
BFSP1
MAP11
LEPROTL1
SH3BP5
FA2H
KLHL7
CPSF6
GPD2
KITLG
PTPRA
H3-2
NCKAP1
AK4
UBE2J2
USP36
WDR45B
SLC20A1
LIG3
VPS36
PCLO
KRTAP2-1
SCYL2
DEPDC4
SNX9
ARRDC4
JMJD1C
CHMP7
H2BC4
H2AC6
EXT1
POMGNT2
NFRKB
EMB
LRP11
MLLT3
CTAGE15
ABRAXAS2
SRRM2
EIF3A
PET117
KAT14
SFT2D3
HOMER1
PTMA
PRKAR1A
ZDHHC3
EXOSC7
INO80D
SYBU
TBC1D2B
EPM2A
ZNF697
SPG7
PANX1
PAM
HSF1
BOP1
LOC100996750
KRTAP4-7
SEC13
NXF1
FAM207A
RNASEH1
NOCT
DDX59
IMPACT
XYLB
RANBP9
TMX4
C3orf70
SLC7A1
TMEM268
MYZAP
GCOM1
DYNC1LI1
ATMIN
KCNS1
UHMK1
CYREN
TMED7-TICAM2
TMED7
CLK4
FBXL4
NDFIP1
LPGAT1
MLYCD
MAP3K21
EGFR
GRK3
PPP1R2B
TFRC
ZNF124
ZSCAN25
RAD23B
CKAP5
RWDD3
MYO5A
DEPDC7
CACNA1E
ZNF337
CKS2
LRRC59
SLC38A2
DUS1L
YBX1
CPOX
PTK2
APEH
PTS
MIB1
TKT
GPRC5C
ENGASE
REXO1
EIF4A3
H3-3B
PSTK
LOC100289561
KDF1
PIBF1
DIS3
INPP5F
EIF5A
CUL1
TPD52
GNAL
CST3
IDH2
WDR4
WASF1
CDC40
MIDEAS
PTDSS1
MTERF3
PER2
PKP4
CCDC148
TLL2
MAFF
FAM220A
ANKRD18B
NIPAL2
ITGA6
MAP3K14
USP10
DPY19L2
STX18
SOD2
WTAP
ACOX3
TRMT44
MKRN2
CNP
RAB18
CITED2
HDDC2
POLR2D
CPT2
SIRT5
GCLM
SPTBN1
ARHGAP31
TRIP12
FBXO36
SERP1
EIF2A
YPEL2
PROSER1
NHLRC3
MFSD14C
TRIM25
TIFA
ARSG
ERN1
TRIM39
CEBPG
DSE
C5orf63
NTAQ1
C10orf95
EPB41
TSPYL4
LAMA2
SLCO6A1
TCL1A
GHITM
MLEC
BORCS5
KDM3A
SLC25A4
STK40
RABEP1
TMEM229B
CDK17
OCIAD2
BCAP29
KRTAP10-6
PLEKHH1
DSG2
STEAP3
SLC12A5
LRP5
KRTAP4-12
NOTCH2NLB
KANSL1
RPS6
FKBP1A
CHD1L
C9orf85
ABHD17B
STRIP2
APOLD1
SPTLC2
VEZF1
MIF
TMEM70
ATP2A2
TAPT1
REST
HTATIP2
B4GALT2
AMD1
API5
AMMECR1L
XPO6
MBTPS1
KAZALD1
PLEKHA8
BLCAP
PARD6B
TAB2
PDCD5
GRK5
ARHGAP29
ZBTB7C
SEPTIN4
HEXIM2
CFL1
ERI1
CUL7
SUPT20H
GEMIN4
TOMM34
PRDM2
SPEF2
KRTAP10-5
UNC79
BTBD7
VOPP1
MAP3K7CL
ANO2
PARK7
PDCD4
MCL1
SCAF4
HSBP1
NUDT18
TXN
MAP3K5
FBXO43
SRCIN1
ALOX5
PTPRD
SPHKAP
NKIRAS1
WASHC4
ATXN7L2
TRMT1L
SWT1
C1orf53
ADAR
SMC3
MAGI3
HESX1
APPL1
FUCA2
NR1D2
SREBF1
ODC1
CFLAR
ZNF441
ROCK1
PATJ
LGALSL
TRIM47
FOXD4L3
EIF2D
ZFAND5
MCMBP
COG1
TBCD
KLHL9
MALL
SLC16A6
LRRCC1
ZFHX3
NDEL1
PFN1
NT5C2
RTKN2
CMTM7
HOXB9
LRFN1
MICALL2
PEX3
ADAT2
DNM1L
CDK8
RAB1A
SLMAP
KBTBD8
DNAJC25-GNG10
DNAJC25
AMOTL2
GAPDH
AP3M2
SAAL1
ANKRD36C
EHD4
NPM1
ELMO2
CCDC57
SLC39A8
CEP68
TMEM251
MOAP1
TYMSOS
TYMS
TMEM65
PKD1
SERPINB9
CD38
CDYL2
NPY4R
UBE2D3
SPHK2
RPL18
HNRNPL
P4HB
AGK
SLC25A36
CLK1
SDCBP
BTF3L4
FBXL5
TPGS2
NUDT4
ITSN2
RASAL2
MKI67
NUDT4B
PM20D2
BRD3OS
CASD1
ADNP2
SH3D19
MAP2
PITX3
DOCK5
MRAS
MOXD1
ZNF80
PPRC1
NOTCH2
RPL6
ARNTL
PTPN11
RPL35
ARPC5L
PTPN4
PTP4A1
DDX42
CCDC47
INTS6
UQCRFS1
GGCT
KCTD18
SMIM19
SLC20A2
NDUFA6
TRIP13
BRD9
XPR1
SPIDR
H2BC13
H2AC13
ACTR5
TMED3
ARSB
IMPA2
HLA-B
PDE8B
RPL13
NBN
RUBCN
ANKRD46
ELAC1
AEN
ADI1
TPD52L1
SFXN1
FBXL13
ARMC10
TGFBR2
NCOA6
PARD3B
EFR3A
CLSTN1
GALNT7
FSTL1
HSPG2
KRTAP9-2
RAD54L2
AKIRIN2
UBE2L3
RCAN1
CD55
ANKRD36B
GSTO1
PANK1
IQSEC3
HELZ
STRN3
AP4S1
RAN
CAV2
SCN8A
BOD1
WAPL
NFYC
SNX19
TOMM40
TXNDC15
PGAP2
SRRT
IPO8
CCZ1B
EHBP1
PELI1
KPNA2
KLF6
BTF3
OAT
ANXA4
DENND4B
PCTP
AAK1
NCOA2
GNPNAT1
SLC38A10
PARP8
GEM
PSEN2
GMNC
BAG3
TLK2
PLAAT1
ACADS
JAK1
PTPRE
GAS8
NANOS1
DBNDD1
ARHGAP32
RBM20
PSD3
INPP4A
HEG1
CTAGE6
HOXB3
SLC25A52
BANP
RPS19
PRPF19
ATAD3B
RFX3
PIGO
HNRNPUL2
SZT2
MED8
FBXW4
LOC100421372
HSPA14
CDNF
CMTR2
RAE1
DDX17
GRB2
SYNCRIP
DHX15
SMARCC1
SH3BGR
LCA5L
MFSD8
ABHD18
CD44
ASAP1
DEK
FAT1
ADRB1
AARS2
FBXO31
MAP1LC3B
PRRC2B
AZIN1
ZNF354B
SETD3
CCNK
OARD1
NFYA
PHF3
DCUN1D4
SETD4
GLRX2
ATG16L2
RALY
POMK
DHRS13
ATPAF1
MET
TDRD7
ANXA11
DHRS4L2
TMEM74
STIM2
AXL
SORL1
PRSS12
SLK
ICA1
GORASP2
PAFAH1B2
PIK3CA
OTUD5
SMAP2
RNF32
MYCBP2
SEC24D
NEDD4
PAG1
REEP3
GTF3A
LINC02210-CRHR1
TANC2
CBX2
ZNF532
CASR
ADNP
EIF1
LEMD2
PPP1CC
HNRNPD
DDT
KMT2E
RHOB
ZNF623
MFSD14A
IGSF9
TMEM109
DYNLT1
ENDOD1
NMT2
TBL2
RNF145
PXK
CDK16
WWP1
SMCO4
PRNP
ZXDB
CYTL1
ADAMTS2
SMG5
DDX1
SPRED1
TMEM245
OTUD7B
RPL14
UBN2
RTN4
GATM
SPATA5L1
COMMD10
EGLN1
KRT18
MALT1
CDKN1B
NUMB
ZNF799
NAB1
TESMIN
BTG3
CXADR
RNF24
NOMO1
BTBD3
FZD6
ARHGAP42
TBC1D1
TSPYL5
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CYP51A1
C7orf25
TRDMT1
TUBA1C
CCZ1
IFNGR1
PLEKHF2
OCLN
THAP3
CEP43
CNOT6L
LRRC61
ACTR3C
ICA1L
PITPNC1
PHC1
SLC45A3
PHIP
PPIA
DIMT1
RABL2B
IREB2
PTK2B
TNRC6B
TRIM35
MTCH1
YRDC
C1orf122
FAM20B
FAM110A
NUDCD2
HMMR
KIAA1109
CBX8
ORAI1
ROCK2
TTC36
TMEM25
HBEGF
RBP1
LIMD1
MAP10
TMEM184B
MAPRE2
ST14
MIER2
SLC25A48
CXCL14
LRP5L
CSMD3
MTMR9
NUDT15
RAB5A
EFHB
CDH1
SUGCT
MPLKIP
MACROH2A1
SLC39A10
RSF1
AAMDC
RGPD8
RGPD5
RGPD6
TERF2IP
KARS1
ETV3
SIK3
IAH1
MIOS
HIVEP1
TMEM64
RIMS2
STIMATE-MUSTN1
STIMATE
USP6NL
FGFR4
ZNF365
CPXM2
CIDEA
CTDP1
ATRIP
NEURL2
CTSA
ORC2
LNPK
FAM3C
PPP6R1
ME2
NT5C
CCDC149
TRIM65
ZC3H12C
MSX1
RHOU
PKD2L2
GNPDA1
PDLIM3
RBPMS
PTPRS
KRT3
NPFFR1
RANGAP1
PHAX
APTX
DNAJA1
MARCHF5
CPEB3
G3BP1
RMND5A
RNF103-CHMP3
PTCD1
CPSF4
RBL2
KDM1A
GXYLT1
MYL12B
CACUL1
NFATC3
ATP5F1E
SNX14