ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
CCAR2
IPPK
ZMPSTE24
EXO5
CD33
SCNM1
LYSMD1
CAP1
ZFP69B
GRPEL2
MTMR9
LAMP1
SH3BP2
ALOX5AP
CAB39
ITGB2
RPS19
WDFY3
ITGAM
NFYC
NLRP12
NCF2
RXRA
NCF1
LGALS8
STEAP4
PNP
PGA3
SNRNP200
FAF1
PGK1
SPATC1
ZFP69
VTA1
NMBR
TSSC4
CD244
PPT1
HBS1L
HAUS6
ABT1
MTF2
EXOSC3
MRPS18C
HELQ
ARHGAP30
TRIT1
SP110
SETDB1
FCER1G
PGA5
RMND1
ARMT1
IPCEF1
RASA1
NUTM1
NOP10
PPIH
PGA4
MRPL24
PDLIM2
ARPC3
TMEM154
RMDN1
SNAPC3
IL16
SASS6
RNF149
NDFIP2
IFRD2
MTPN
LUZP6
NUF2
UCKL1
MTRNR2L8
POMP
ZNF408
ARHGAP1
VCPIP1
C8orf44-SGK3
UBR7
GON7
SRSF11
LRRC40
NIP7
COG8
TLE4
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
MFSD2A
ARPC2
FAM207A
RNPEP
FOXJ3
CMTR1
ZNF410
HIBCH
SMAP2
MIA3
DISC1
ATP5MPL
MMACHC
CCDC163
RPL37
SLC25A32
DCAF13
FEM1A
VPS33B
UBAP2L
C1orf43
HEATR1
RWDD1
TFB2M
CNST
CEACAM21
CUL7
ATG5
TIGD4
ARFIP1
PPP1R12C
URM1
EIF3D
STK4
PTK2B
TRIM35
UBAP1
EIF2D
SELENOH
YES1
EPRS1
NOTCH2NLC
KHDRBS1
MEFV
TNFAIP8L2
ZNF484
TMEM30A
CBWD5
USF1
RUBCNL
MOB4
RTF2
UBXN8
HMGB1
USPL1
TMEM59
UCHL5
RO60
NIBAN3
TNFAIP1
IFT20
HMBOX1
INTS9
TIPRL
DCP1A
CHMP4B
TMEM127
CIAO1
PISD
OAS3
TTC14
WDR70
TOMM20
MRPS31
DOCK8
CD1A
EXOSC4
MED18
ZNF197
XRCC5
TPRKB
DCAF10
LST1
WDR55
HARS2
HARS1
CLIC5
TGFBR2
SIGLECL1
TIMM21
FBXO15
DGAT1
PEX12
SIGLEC11
MDM4
C4orf3
TTC13
INPP4B
UTP3
KIFAP3
TBL3
GTF2H2C
GTF2H2
UGGT1
ZNF696
CCL2
ATP6V1C1
STK36
RNF25
FPR1
WDPCP
MDH1
OSCAR
NDUFA3
CBWD1
MYBL1
SLC33A1
NECAP2
RPL8
ADPRS
CTSG
CCL4L2
NFKBIL1
ATP6V1G2
SCAF11
C6orf89
ARHGEF1
CCT8
THAP6
UBLCP1
IFNGR1
KBTBD6
NDUFS3
KBTBD4
ZNF622
FKBP1A
VPS25
RGL1
ARPC5
FCAMR
NOXA1
MRPS23
EIF2B3
NSUN5
RNF141
PRPF3
RAC2
SNX19
DR1
ASXL2
HAX1
RTCA
ATG16L1
PDCD2
B3GALNT2
TCF12
PIGM
P3H1
PPP1R12B
WNT2B
PEX3
ADAT2
SDCCAG8
CEP170
N4BP2L2
GOLGA7
NOL11
AOPEP
CBWD2
SDHAF3
MTRNR2L2
PKD2L2
OTUD7B
DENND4B
SCAF1
RRS1
TADA1
PIGU
GOSR1
MTMR14
GALK2
COPS2
TPK1
NOTCH2NLA
ARHGEF12
AGGF1
FUCA1
SLC35B4
AKR1A1
CALCOCO1
ZFYVE1
TRIP4
PIKFYVE
FBXO46
PSMD7
FAM120B
TOR4A
MRPL10
LRRC46
APPL2
SF3B1
RALB
ACAD9
TATDN1
NDUFB9
E2F4
ZNF780A
CEP350
SNX3
CHCHD5
GOLGA5
ZNF56
PACC1
ACVRL1
WDR61
PIGBOS1
PIGB
TCTEX1D1
STAU1
TMEM186
PMM2
NOB1
PHACTR4
ZNF331
TAF11
PRKAB1
CSF2RB
SIGLEC16
THOC5
NME7
BLZF1
STARD6
C18orf54
CCNL1
GET4
CLPP
C1orf74
SLC22A16
FAM227B
DTWD1
CBWD3
THAP12
GVQW3
UCK1
SLC24A1
INTS14
TBPL1
PDPR
PA2G4
SNRPC
TAF12
ZNF142
BCS1L
GSPT1
ZNF337
MRPL17
ITGAL
KBTBD7
XRN2
IPO8
SRSF4
IBA57
NOL6
OPA1
SYMPK
FOXA3
UBL7
THOC3
TERF2
NFX1
LOC100289561
DESI2
TPM3
TLE1
GPR68
WIPF2
UBR1
INTS1
KATNBL1
CXXC1
MAN1B1
TOR1AIP1
ARHGAP25
JOSD2
RPL37A
GTPBP10
RPS6KA1
PPCDC
HK3
ORMDL3
PHB
BRIX1
YKT6
FITM2
S100A2
ELOF1
RPL27
DYNC2H1
DUSP6
DBI
C2orf76
DNAJC16
TAF13
NAPG
ATP5PO
RAD50
CITED4
LAMTOR5
PDF
PICALM
HDDC2
CCDC149
RANBP3
GUK1
PGBD4
EMC7
HSPA13
NLRP3
LILRA2
MRFAP1
IRAK1BP1
CFAP298-TCP10L
CFAP298
GLI4
TPT1
WDFY2
C22orf34
SSNA1
ANAPC2
GTF2H2C_2
CCDC30
SPG11
ZMYND12
PPCS
LYPLAL1
OAS2
AP2B1
NCSTN
COPA
SLC31A1
FKBP15
OCSTAMP
ZNF668
ZNF646
SF3A3
CIAO3
MED10
SLC37A4
CRTC2
NUP133
MDN1
TBC1D23
PUM1
ADAM10
TSN
RAB1A
HUS1
MTFR1
KCTD5
RNF14
TMX1
MLKL
AFG1L
RRM1
SF3B5
CCDC114
CEACAM4
RPIA
MEF2C
BOD1L1
TCTE3
ERMARD
IL7R
CALR3
C19orf44
AHCTF1
ZCWPW2
AZI2
NUP58
TLN1
CREB3
RPL29
RPS16
NR3C1
TOMM6
TRAPPC4
RPS25
PPME1
C2CD3
ZNF697
RPL5
VCPKMT
APH1A
VPS26C
RGPD2
RGPD1
BOD1
COPB1
ANXA2R
OBI1
ACP3
BOLA1
ADSS2
ETNK1
TRMT11
DNAJC10
GOPC
CTU1
GTF2B
CCL22
MRPL55
FRG1
DNAH14
SIGLEC6
ATG7
CSNK1A1
GNPAT
C1orf131
CUTA
MED23
RPL22
SART1
SRP9
ZNF614
SLC1A5
USP3
NBR1
GIMAP8
CTDP1
ZW10
ZNF350
MRPS35
SRPRA
OCIAD1
CATSPERE
SNAP47
JMJD4
CBWD6
KIF15
KIAA1143
RAB44
DHDDS
UBE2V1
PARVB
IL1RN
PPP2CB
ZC3H6
ADAM17
TRIM37
SNX17
EIF2B4
LTA4H
RSL24D1
XRRA1
SPCS2
NUP155
MTMR6
S100A9
VIRMA
SH2B1
TUFM
PUM3
SEC14L1
GTF2E2
LAPTM5
CNOT1
CLEC16A
NOTCH2NLB
NKIRAS1
RPL15
SNAPC5
SKP2
LMBRD2
MEN1
TRIP11
CHMP7
EEF1AKNMT
ARID2
FIGNL2
CTNNB1
COPS8
MED4
TBRG1
ZNF12
NUDCD1
RIC8B
ZNF140
RPL36
GZF1
NDUFC1
NAA15
CHMP5
BAG1
CCDC146
LTN1
GGPS1
ARID4B
ABCD3
ZNF318
RPS7
PPP1R11
CGAS
TNNI2
LILRB4
USP15
MRPL44
DCPS
ZNF397
ZNF221
ABCA3
RPS20
HIGD2B
BBS4
IL6R
DDX41
RPL38
ORC5
AHI1
COX7A2
TLR4
OR4Q2
CCDC150
EMC8
COX4I1
RPL11
ZNF354B
RNF216
POLN
HAUS3
INPP5D
APOL2
GBA
RC3H2
TRIM25
MCOLN1
PRRG2
NOSIP
EED
LYNX1-SLURP2
LYNX1
BHLHE40
THRAP3
KIAA1586
NSMCE3
SYK
GHRL
BRF2
ZNF26
PSMB1
TBP
LONP2
ABCC11
DAB2
TRIAP1
TMEM208
LRRC29
NDUFS2
CNPY3
LIN54
SEC22B
CTTN
PPP6C
LTO1
PNPLA6
IPO13
ERI1
LATS1
MAK16
POM121
EFHC1
PTK6
CD53
NCBP2AS2
NCBP2
CRBN
SLC44A1
PSMD9
HPD
YWHAB
SGO2
NDUFAF6
PSMA6
SLC35F5
AVIL
MAD2L1BP
GTPBP2
PCBP2
ZNF225
CTR9
UTP23
CDC42
NCKAP1L
LILRA1
NOTCH2
ZNF567
ABCB10
ATP2B4
TRMT61B
MAGEF1
WDR7
KIF2C
TESK1
CNIH4
UFL1
PTTG1IP
OAS1
SEC13
INTS12
GSTCD
ZNF230
TOMM7
YTHDF1
MRPL16
GABPA
ATP5PF
DAXX
GNAI3
SLA
FAM185A
KLHL20
WDR36
SMIM26
ZNF354C
ZC3HAV1
NPRL3
SLC30A7
SLC7A6OS
PRMT7
ST7L
CAPZA1
AGT
SSBP1
TPR
ODR4
WSB1
TAF1B
ZNF549
TCHP
DDX23
TOMM22
WASHC5
NSMCE2
SKIV2L
NELFE
ZC3H11A
ALG10B
CEP63
ANAPC13
FAU
NCF4
DEDD
UQCRC1
SPRTN
EXOC8
SNU13
TM6SF1
IFITM2
ZNF212
NAPB
RNF139
KATNA1
UBE2Q1
DUS3L
PPIL4
VKORC1
UNC50
COA5
MRPL45
GON4L
SRBD1
TMEM222
NDUFV1
SPHK2
RPL18
ERLIN2
DNTTIP2
DDX18
FAM200B
STAT2
AP3B1
TEP1
BCL2A1
RRP15
SAMD4B
TRIM46
KRTCAP2
MED15
PPP1R15B
ATP6V0B
WDFY1
PROS1
ICAM1
HMGCL
NDUFAB1
TIGD6
HMGXB3
ZNF189
MRPL50
PKN2
FBXW2
DHX15
SHPRH
ZNF721
PIGG
TTC33
TAB1
MTERF1
SMIM15
TCTEX1D2
AMD1
TMTC3
CEP290
RBM6
SNRPD3
GUCD1
TRMU
CDK19
MIDEAS
TMED4
GIT2
OSBPL7
CTNNBL1
NBN
PPIP5K2
GIN1
FAM32A
FCHO2
PKD1
TNFSF10
DCAF8
RPL6
TOR1A
PPP1R8
CCPG1
C15orf65
ZNF224
MAPKAP1
NUDT9
IKBIP
APAF1
TRAF3IP3
SUCO
ATP9B
RBM15B
RAB3C
TNPO1
CHEK1
LYPLA2
PEX6
SKAP2
QTRT2
CCDC191
ALG10
FBXO38
MRPS10
IPP
CCNT2
EIF1
TMEM248
TSEN15
SDHB
SDHAF2
CPSF7
EXOSC6
ZNF226
HNRNPU
ANGEL1
MED20
BYSL
DHX34
WDR53
FBXO45
MICOS13
HSD11B1L
NBPF1
POLR3E
TIGD1
EIF4E2
TMED5
CCDC18
SNUPN
ITGB1BP1
CPSF3
ARHGAP9
MARS1
PHF1
MINDY2
PIGC
TNFRSF10A
PARP10
ZNF398
ZNF425
SEC31A
WFDC3
DNTTIP1
RBM34
KIZ
OTUD6B
CCDC15
HINT1
MINDY3
NOC4L
DDX51
ZNF148
BAX
MFF
KDM1A
ISY1-RAB43
ISY1
KIF22
SLFN13
TMEM43
CHCHD4
BRMS1
RPAP3
PRKCSH
CCDC151
ZNF268
ORC4
MBD5
PPP2CA
CRB1
VPS13C
BATF2
PRCC
ASB6
ZNF134
MFN2
SESN1
LUC7L2
CEP57L1
FMC1-LUC7L2
FMC1
ZNF669
PIGF
CRIPT
POLR1E
CCL4
SIGLEC14
ZNF658
POLI
ZNF846
ABCF2
POMZP3
SMPD3
TBRG4
EIF2S2
TATDN3
NSL1
SPDYE14
SPDYE10P
DHX8
TRAPPC8
FNTA
PPP1R12A
KIFC1
NIPBL
IMPA1
IFI6
HIKESHI
CDK4
SRSF5
LSM2
DCLRE1B
AP4B1
GTF2H3
EIF2B1
NUP42
RPL22L1
METTL18
C1orf112
CSRP1
COX6A1
PSMC1
PRMT2
TCTN1
EEF2K
IFTAP
AP2S1
NXF1
SURF6
LARS2
EIF4ENIF1
GSN
RAB14
SDE2
GORASP2
ETFDH
C4orf46
RBBP5
TKFC
DDB1
ATP5MC2
TTLL4
RBM45
PPID
PKN1
PCDH20
CKS2
DMAP1
CLN5
VRK2
C2CD5
MIER1
DNAI4