ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX148964 | P493-6
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◣ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HSD17B4
ZMIZ2
UNC93B1
MTRNR2L8
H4C12
H4C11
MTRNR2L2
H1-4
JAG2
PRKAG1
TNKS1BP1
TRAPPC4
RPS25
ZBTB4
POLR2A
H4C15
H4C14
WDR74
GALE
H2BC11
H2AC11
SPATC1L
CD74
H1-2
CCDC66
PAFAH2
RRAS2
H1-5
RNF169
RGPD2
RGPD1
GTF2H2C_2
GTF2H2
RCC1
H3C11
H2BC21
H2AC20
HLA-DRB5
NME1-NME2
NME1
H3C15
H3C14
SLC39A13
H4C9
H4C8
TNRC6B
ERCC2
NCBP3
CALM1
RPL3
SF3A3
PSMD3
TMEM229B
H4C5
RBBP5
ZNF398
POLDIP3
IKZF3
H1-3
H4C3
H2AC19
H2AC18
DDX23
MTF2
IFRD2
HEXIM2
LAMP1
CCNL1
KMT5B
CTNNB1
CLTC
ZC3H6
FEM1A
DSTYK
COPS7B
EIF2D
CALR3
C19orf44
NOTCH2NLC
STX18
TMEM41A
TBL3
TIMM21
FBXO15
BRWD1
ABCF2
UBC
MRPL21
IGHMBP2
NCBP2AS2
NCBP2
CALCOCO1
DCP1A
UCKL1
ATAD2
TSNAXIP1
RANBP10
PPRC1
PPP5D1
CALM3
UNK
GSPT1
TMEM199
POLDIP2
POLR2J3
SOD2
NOTCH2NLA
TMEM222
WTAP
WDR53
FBXO45
GATB
FOXJ3
CLPB
OPA1
NDUFS7
SSNA1
ANAPC2
RBL1
TSN
CCDC88A
SEC13
TOMM22
SPNS1
CALM2
LRP6
MRM3
GLOD4
AURKAIP1
ZSCAN22
CYCS
ORMDL3
NOTCH2
MRTO4
EMC1
TCF3
NDUFS3
KBTBD4
RPL8
COPS8
STX16
TIMM22
KBTBD7
NMNAT1
LZIC
UBB
CCDC77
BTRC
NUP214
SMN2
SMN1
CNOT1
TMEM115
PEMT
MED23
TRIP4
C16orf91
DOHH
CFAP410
ST3GAL2
KMT2D
POMZP3
CHMP4B
SYMPK
SCAF1
KPNB1
CTDP1
ZNF337
BOD1
RPS3
GSTA4
AP2S1
TSSC4
IST1
AMD1
PEX3
ADAT2
PRCC
AHCYL2
RPS20
WASHC2C
FOXA3
PNKD
AAMP
SNX17
EIF2B4
ING3
TCEA2
HTRA2
TSC1
GFI1B
PA2G4
FRA10AC1
CDKL3
GTF2H3
EIF2B1
HMGB1
ADPGK
CKS2
ZNF212
PHIP
CLEC16A
SMPD3
THRAP3
NUF2
WASHC2A
HEXA
PEX26
NAGPA
KCTD9
CDCA2
KBTBD6
MRPL24
RPL22
ZFAND2A
TTC13
DDIT4
USP30
NUDCD1
ZCCHC4
PPP1R12B
MED15
HIKESHI
UBE2B
NOTCH2NLB
KDM5A
ZKSCAN2
ZBTB45
TRIAP1
RPL18A
ZNF721
PIGG
NXF1
UBE2D3
ATP5MF-PTCD1
ATP5MF
SCNM1
LYSMD1
RPS6KB2
PKM
MCM7
AP4M1
FAM207A
RPS28
NDUFA7
MAF1
ATG14
OSCAR
NDUFA3
INVS
ERP44
CRTC2
TOB2
H2AC21
USPL1
MAD2L1BP
MICOS13
HSD11B1L
TMEM127
CIAO1
OAZ3
MRPL9
PNRC2
IPO11
SCRIB
KCTD5
RPIA
CDC25C
PANK4
C8orf33
GTPBP2
NPRL2
CYB561D2
ZNF444
NOP14
GRK4
WDPCP
MDH1
TMTC3
CEP290
RPS26
PPP1R12C
FAM53C
DNAJC11
TRAPPC3
GPAM
DIP2A
TNFAIP1
IFT20
RANGAP1
DUS2
DDX28
EIF4A2
ZNF384
CCAR2
PHB
ZW10
CYP51A1
BRIX1
SLC35B4
MAPKAPK5
SMG5
UBR2
MXD4
ATXN2L
C1orf159
SRSF11
MRPS15
RBM42
TMEM208
LRRC29
ZNF56
FUS
NUP153
UBQLN1
PGBD4
EMC7
CUL4A
TBRG4
ALKBH3
KAT7
RLF
PSMF1
BOD1L1
HMBOX1
PSMD11
COMMD1
PINX1
MRPS35
KDM4B
MFN2
DNAJA3
UBE2Q1
SLC25A19
UBQLN4
LAMTOR2
CCT4
C19orf53
NSFL1C
ADNP
TOR1AIP1
HMGCL
DPP8
DCAKD
GHITM
BANP
CCDC146
ZFYVE1
TAF5
FBXW11
GID4
ATPAF2
PBLD
HNRNPH3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TRIP12
FBXO36
DPP9
PCID2
MMACHC
CCDC163
DCAF10
AP2M1
RIC8B
STK25
LRRC40
SPRYD4
INTS9
SLC33A1
LUC7L
VPS37A
CNOT7
NMT1
NOC4L
DDX51
TTC33
MRPL20
UCHL5
RO60
ENDOV
DOLPP1
AHCTF1
ZNF420
CIC
ZFYVE19
DNAJC17
PIGU
ARHGEF12
HNRNPAB
ZGPAT
ARFRP1
TEPSIN
NDUFAF8
EIF3F
NTAN1
SP2
RPL29
RBM6
CSRNP2
SPTLC1
MRPL58
TCF12
COMMD9
LETM1
ZC3H10
STAU1
ACOX3
IDH3B
DNAJB12
RCL1
SMARCAL1
ABRAXAS2
TFPT
PRPF31
MTMR2
RALBP1
BIRC5
LONP1
CATSPERD
SECISBP2
TRMT44
GFUS
UBL7
PHF13
SNAPC3
HSP90AB1
SUPV3L1
ARF4
GTF2H4
GTF2I
TSC2
NTHL1
GTF3C5
ZFPL1
CDCA5
FDPS
COQ9
CIAPIN1
DDX49
COPE
ARHGAP9
JOSD2
H2AX
DDX1
COG2
HSP90B1
CTU1
ZNF749
ELOC
GABPB1
SNRNP70
SART1
PIK3R3
RPS7
RCOR1
MRPS16
SSBP1
DCAF8
RPL12
LRSAM1
TOP3B
TRAF7
MARS1
RAB5C
TMEM59
MRPL39
BOLA1
DCAF1
WASHC5
NSMCE2
DESI2
RWDD1
PARL
NDUFV1
WAPL
CAND1
PHF12
CHCHD3
TRAK2
STRADB
B3GALNT2
IP6K2
SOX6
C11orf58
CRBN
VCPIP1
C8orf44-SGK3
COX7C
SLC24A1
INTS14
SLC7A6OS
PRMT7
CCDC59
TTC4
WDR87
SIPA1L3
ADPRS
IPPK
DPY19L4
MCU
PNRC1
SLC3A2
PSMD2
TRMT61B
CANT1
POLG
USP48
SKIV2L
NELFE
PRKACA
RPS19
PABPC1
BRF2
ATF4
TMEM242
METTL9
THYN1
ACAD8
PLEKHM3
BICD2
FAM228B
SIRT2
NFKBIB
KLLN
SMIM13
PSMD4
SSR3
H2BC18
THOC6
HCFC1R1
H3C13
MANF
FAM149B1
ECD
GTF2H2C
PTEN
UBE3B
ZNF148
TIMM13
TACO1
GFM1
NDUFB5
MRPL47
CCDC90B
ZNF500
RCOR3
RPS16
VIRMA
TFRC
TARBP2
RPLP1
TMEM217
TBC1D22B
NKIRAS1
COQ7
ASXL1
TRUB1
ZER1
RUVBL1
COA6
COPS7A
NOLC1
LARS1
UBA52
RFXANK
BORCS8
CMTR1
SESN1
EIF4A1
DNM1L
BMS1
SERBP1
CDKN2AIPNL
HAGH
FAHD1
POLR2E
PCBP2
CFAP20
SPRED1
ZC3H3
CAPN10
RPLP0
CACTIN
HPS4
USP15
CLP1
ACTR1A
XRRA1
SPCS2
BUB3
KAT8
NDUFAB1
NLK
ATRIP
PHB2
WBP2
TMEM230
BUB1B
REXO1
SF3B2
ZNF518A
PARK7
NEURL2
CTSA
B4GALT7
SRP68
KMT2B
ZNF225
RNASEH2C
MDM4
HIF1AN
FAF1
CWC25
SLC4A2
CFL1
XPOT
RPL15
SLX1B
SLX1A
BOLA2B
BOLA2
WRNIP1
VCP
TIGD6
HMGXB3
PALB2
DCTN5
MRPS11
MRPL46
PTBP1
RANBP2
DFFA
EIF2S2
SELENOH
CEP350
ZFYVE28
WDR25
WARS1
CCDC150
ZNF189
MRPL50
SNRPD3
GUCD1
CCP110
TEFM
C5orf51
SEC11C
SRSF2
MFSD11
RPP30
FBXO46
CFAP99
UBN1
GLYR1
TATDN3
NSL1
POLR3D
RPL23A
C19orf48
DGAT1
NOL10
ZNF140
CHCHD6
SUMF1
SEC61A1
TRMU
SPHK2
CDK8
RAB1A
SUGP1
MAU2
MRPL3
RAD23A
CCNT2
C12orf43
PHAX
CDK5
SRRD
WDR4
SMIM12
NCDN
KIAA0319L
CCDC124
ZNF451
FAM156A
CASC3
PPIA
VPS33A
TMEM69
LRCH4
FBXO24
EXOSC4
ZNF2
ZNF527
PANK3
FAM156B
SDE2
CLDND1
PEPD
HIRIP3
RTTN
CNPY2
IPO7
COMMD2
CAPN15
CNIH4
RPL18
RTF2
TOP3A
SMCR8
SFSWAP
RAD54L2
KPTN
RPS3A
SNAP47
UBAC1
TOP2B
JMJD4
RPL6
ZNF133
SRSF1
CNOT4
AKIRIN2
ZNF805
AP5Z1
RASEF
MRPL48
FANCD2
CDK5RAP1
RTEL1
WNK1
CCDC86
ATP5PO
SRPRA
SPRYD3
TOR1A
ABT1
L3MBTL2
CCNC
TSFM
MRPL44
USP35
KCTD21
MRPS23
PKN2
DDX46
GPBP1L1
TIMM50
ZNF335
DYRK1B
MAGOH
SEL1L
TBC1D22A
SCAMP3
DUS3L
FASTKD1
SERPINI1
PDCD10
REXO4
USP42
SURF6
TAS1R1
NOL9
RBSN
TMEM258
FEN1
EIF2B5
BOLA2-SMG1P6
DRG2
TUBGCP3
CIAO3
EIF1
FAM133B
KDM4A
GATAD2A
RPLP2
GPANK1
CSNK2B
FAM227B
DTWD1
SLMAP
HBS1L
MTR
AARS2
CCNI
IARS1
PPP6C
PSME3
ZC3H11A
RPTOR
DYNC1I2
HNRNPL
RERE
MRPL4
FBXW2
SUFU
SERP1
EIF2A
PDCD4
UFSP2
EFTUD2
CCDC103
TMEM186
PMM2
RAB5IF
C12orf73
TMEM160
MXI1
TMEM43
CHCHD4
TFEB
EIF5
CLCN7
MON2
ZNF26
PPIL4
INTS1
PSMD8
ECSIT
VIPAS39
AHSA1
NDUFS2
APTX
DNM2
TVP23B
PDE6D
LTO1
NUS1
PCM1
ACAD9
SH2B1
GARS1
VPS4B
TBCCD1
EIF3C
WDR11
CHCHD1
TBCB
POLR2I
MYLIP
NFYC
WDR43
VPS50
HEPACAM2
AJUBA
EIF3CL
SRP9
ZNF567
CBWD5
RAD52
MIA3
SNRPD1
ARFGAP2
FBXO48
APLF
ZNF554
TUBGCP6
ERLIN2
BDP1
ZMPSTE24
POR
CALR
RPGRIP1L
FTO
ZSWIM9
LIG1
STOML2
EIF3D
API5
PRDX1
ZSWIM7
TTC19
RBM28
MAN2C1
SEPTIN9
HUS1
RFX1
MRPL37
CYB5RL
AKAP8
ZNF419
LANCL2
MRPL55
ATP5MPL
NBPF1
MTMR9
DHX33
ZNRD2
THOC1
UMPS
FAM204A
CBWD2
ATG7
SSU72
FAM185A
POLE3
C9orf43
NCOA3
GPR108
ARNTL
YIPF2
TIMM29
EXO5
EIF5B
TXN2
POLR3F
DZANK1
FAM222A
CDK11B
PNPLA6
TRMT2A
RANBP1
VAPA
PMPCA
ENTR1
GTF2IRD2B
FAM193A
UBR4
TUFM
YWHAG
PPP1R8
TSR1
SGSM2
SCAMP4
ADAT3
ADK
VDAC2
CHMP1B
INTS12
GSTCD
EXOSC3
EIF4A3
WDR18
TFB2M
CNST
SESN3
SNX27
LRRC59
GTF3C3
STK17A
ABCC5
DDX19A
NUP54
ZNF436
GOLGA1
METTL26
DNAJA1
SRSF6
ATR
MRPL12
DIABLO
CBWD3
ZNF235
CDK5RAP2
CCNL2
LMAN2
SNAPIN
PELP1
ILF3
CCNG2
SAR1B
STYXL1
NDUFA10
ZNF17
KHDC4
UBIAD1
DDX41
MARCHF5
CPEB3
MIS18A
TXNDC9
NIP7
COG8
IPO13
MTIF2
TMEM245
THOC3
TMEM248
NFXL1
ABCB8
SLC44A2
NOM1
ATP5F1B
UBAP2
SRCAP
LOC730183
ZCCHC8
RETSAT
C17orf75
TRA2B
RPS23
ATP6AP1L
SAP30BP
RECQL5
RPUSD4
RNMT
FAM210A
FAM118B