ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

H4C11
GSTA4
H4C12
H4C15
H4C14
UBC
FLOT1
KLF6
H3C2
HEXIM2
AREG
H3C15
H3C14
H1-4
CALM2
EIF2D
DCP1A
H2BC11
H2AC11
H4C5
PRDX1
ERRFI1
KMT2A
EEF1A1
H2BC18
H3C13
CDC25C
FAM53C
ZBTB4
POLR2A
KRT19
H2AC19
H2AC18
EREG
H4C3
H2BC21
H2AC20
H2AC21
ZFAND5
GTF2IRD2B
MTHFD2
GAPDH
ARPP19
CITED2
PKM
VRK2
HEXB
ID2
TRIB3
H2BC4
H2AC6
ARHGAP32
DRG2
PMAIP1
PPP4R3B
EGLN1
C17orf75
NUCKS1
CCN1
H1-2
INO80D
TMEM242
EPC1
STX16
CALM1
ZC3H11A
BCL9L
H2BC17
H2AC17
TMEM68
TGS1
VWA8
ZER1
ACYP2
DCAF10
H2AX
GTF2H2C_2
GTF2H2C
ZCCHC3
SYDE2
TOB2
GTF2IRD2
H4C1
ZNF341
H3C1
NRL
PCK2
POLR3D
EPCAM
RCOR3
ACSF3
PERP
RHOB
SRSF2
MFSD11
MKNK2
MED23
PTBP1
GTF2H2
AAR2
TMSB10
CIRBP
NFKBIA
PRSS22
RPL18A
NOTCH2NLA
GEMIN7
H3C7
H2BC9
TPD52
LAMA3
PRSS23
PLEKHM3
H4-16
GDF15
IST1
SRSF6
AMOTL2
KRT8
ZNF518A
TUBGCP3
NABP1
JUNB
STX18
TRA2B
SMAD3
ELOB
BUD13
SDC4
TBC1D22A
TP53BP2
MIER1
HNRNPA3
DHRS13
FAM227B
DTWD1
P4HA1
TPI1
TMA16
FAM136A
GBA
LATS1
MYL12A
C5orf24
ANXA4
TACSTD2
UBE3C
TBC1D14
ARHGEF35
TRAM2
PPFIBP2
ADPRHL1
DDIT4
GTF2A2
CASC3
PRRC2A
SNX5
MGME1
ETS1
PRAG1
RORA
FRA10AC1
RPL10A
SRSF3
DMTF1
SRCAP
LOC730183
ZNF143
KRT18
MRPL44
GADD45B
H3C4
SKIDA1
NOXA1
KNTC1
NFIB
HIC2
INO80
ZNF292
ZNF410
HMGN2
GRHL3
CTNNB1
SLC24A1
INTS14
PSMD8
RTN4
ITGB1
ARL15
TRIB1
SIPA1L1
TNFSF15
HRH1
MANF
SLC44A2
MPHOSPH10
MCEE
KEAP1
CHAC1
MTF2
USP30
MTMR2
ZMPSTE24
SAR1B
COX18
KIF21A
ZNF609
TBX3
RNF220
FAM162A
CCDC58
ZC3H12C
TGFB2
XPO4
PHKB
ITFG1
DDX6
CRIM1
GTF3C2
RBM25
TM2D1
PIAS3
CFL2
KDM7A
H3C11
KANK2
H4C13
NDUFS7
RMDN2
RAD54L2
NFYC
TMEM106B
MTCH2
H2BC12
H2AC12
PFKFB3
ADAP1
DNPH1
EIF4A3
GET4
DNAJC19
TBC1D19
UGP2
TUBA1B
PDCD2
DYNLL2
MRPL21
IGHMBP2
PPIA
EIF1
AFF1
C1orf53
EIF4G1
LSM14A
ATP8B1
LDHA
RFT1
VPS35L
RHBDD1
SPTAN1
RNF146
IER3
ZCCHC4
RPL5
TRDMT1
CREBL2
WSB1
ZDHHC17
ZNF706
POLR3H
NIPSNAP2
DUS1L
ZBTB37
PDF
USP3
ATF4
ZNF84
DARS1
USP24
TBL1XR1
NFKB1
UBE2J1
GFER
ZFAND6
ANKRD18A
FECH
GTF3C5
MCL1
UBE2S
STAG1
SUCLG2
TATDN3
NSL1
STMP1
KMT2E
ARID1A
H4C4
RGS3
MTA3
TFF1
NME1-NME2
NME1
TERF2
PRDM15
H2BC15
H2AC15
DOCK7
SYK
NIBAN2
HUS1
FRG1
PKP4
VHL
DENND6A
MLLT10
DLX4
FOXJ3
TOB1
SLC25A51
SMIM19
SLC20A2
MEMO1
HILPDA
VPS54
TJP1
LAMP1
COMMD1
MTIF2
TRIP11
UBE2V2
SVBP
ERMAP
SHB
GATA6
ZBTB45
INTS12
GSTCD
HSPA5
SEC11A
KAT6A
TJP2
EPB41L4B
LEPROTL1
ELF3
RBM43
KMT5B
TMEM222
ATG5
PSMA1
H2BC5
KDF1
EBAG9
TM2D2
ADAM9
SMC5
CEBPA
REL
SLC39A14
IL20RA
NUF2
CDC73
ZNF76
ANKRD40
ACTB
CDH1
SAV1
C15orf61
FUT4
VARS2
YWHAH
ARHGAP45
RAPH1
PARP9
DTX3L
MYLIP
ZNF770
EIF4G2
PCBP1
ARHGEF38
HMGB1
WDR11
ZSWIM7
TTC19
MRPS31
HOMER1
FANCL
PCBD1
PAK6
CAV1
EIF4A2
PSMF1
ZNF286A
HNRNPF
CREBZF
PAIP1
SH3RF1
CMTM8
SEC13
AURKAIP1
RPS3
REXO4
MFF
ZFP62
PTDSS1
MTERF3
PSMC1
KAZALD1
TGFA
ITPRID2
ZBTB38
RALGAPA1
SEC24D
TMEM41A
KATNBL1
UFL1
MAP2K2
RABGAP1
TMEM216
LNPEP
AAK1
GADD45GIP1
EPN2
WDR74
HERPUD1
SLC38A2
MRPL1
NFAT5
USP34
MTHFD1L
EZR
SMCHD1
AHR
UBE2E3
SPRY2
LRP6
NSFL1C
SLC44A1
IPO9
CCDC7
BTG1
CHMP6
H4C2
DEK
CEBPB
RPS5
SLC35A3
SOCS5
MTHFS
DISP1
PDE2A
WSB2
SLCO1B3
ATP5MF-PTCD1
ATP5MF
USPL1
BRIX1
CCT4
EIF2S2
MRPL3
CIAO3
CSKMT
C11orf98
SELENOT
HEBP2
TMEM45A
ARHGEF5
F3
CLU
KLRC2
SOD2
WTAP
KLLN
PTEN
KIAA0232
FUT11
ARL5A
SNTB2
SOCS1
IGF2R
VWA7
ACOT2
BOD1L1
CGGBP1
SLC25A3
C3orf38
TACC1
C4orf36
SP1
PSMC6
TCF20
TM4SF1
DNAJC11
EIF4A1
EXOSC8
SRSF4
H1-3
XBP1
KCTD11
PXT1
KCTD20
NAPEPLD
PAK1
DBF4B
IRS1
SRSF1
RPL37
RPL13
THEM4
RNF6
AKIRIN1
PCNX4
ANKRD36C
PRDM5
CDC25B
CENPB
TRIP4
FUS
EMC4
TUBA1C
UBA2
SNRPG
BRD2
CD55
SENP6
TMCO3
DCUN1D2
PIK3R1
ZYX
PPP1R16A
CASD1
PGM1
ZNF562
TMCO4
NRP1
SMIM12
YWHAQ
RBM15B
ERCC6L2
PYGO2
LOC101928120
RRP1B
HSF2BP
ARF6
FTH1
CPPED1
PSKH1
ZBED8
SMG6
SRR
H1-5
ALG13
BCAR1
PHLDA2
DR1
EXD2
LTBR
NELFB
CPOX
TEX22
PHLDA1
TMEM17
DLC1
MYO5A
STAT5B
KDM1A
BAZ1B
THBS1
DCLRE1B
AP4B1
ERN1
MTHFD2L
RABGGTA
FUT10
ZFHX3
ISG20
SYNJ2
DSG2
TNKS1BP1
TRIM3
SYT8
HTRA2
MAD2L1BP
PCBP2
MDM4
RPL6
PTPN11
ELF2
ZNF623
SP3
UPF2
UGDH
SRD5A3
FOXJ2
SRXN1
MOV10
SURF6
TVP23B
POR
NUDCD3
SLC39A13
XRCC5
GALE
AGPS
PGGT1B
ITGAV
LSR
RPL19
RANBP9
H2BC13
H2AC13
PRELID2
CCNI2
COPS7B
KMT2D
SNAP47
JMJD4
NDUFAF1
HEXIM1
TSPAN10
NPLOC4
ZNF740
CSAD
ZC3HC1
AKAP10
RCC1
ATL2
OAT
FH
EPG5
SLC25A37
GSK3B
LRP2BP
ANKRD37
DLAT
TNFSF9
SMARCA4
EPM2A
PSME4
PRKCE
CRYBG1
NIPA1
TAF4
PRTFDC1
ZC3H6
CCDC88A
ARFGAP2
AP3S2
SRSF7
SNRPC
STK40
HECTD2
PDS5B
KDM4B
ARL6IP1
VPS45
TUBB4B
PHF3
RFESD
ZAR1L
BRCA2
ZSCAN9
SQSTM1
PBK
SGK1
MYO1B
CLSTN1
SCRN1
TMPRSS13
SRP68
MOB3A
IZUMO4
RRM1
WIZ
AVPI1
KIF22
CEP135
SLC39A10
INTS6
ZNF621
FGGY
VPS9D1
TESMIN
YAP1
RHOG
SMURF2
EP400
DPY19L1
ICMT
H3C10
LAMC2
TCF12
DPY19L4
DMAP1
SCFD1
MARCHF7
STX6
SMAGP
RBM45
BLOC1S6
OCIAD1
CHAMP1
RNF135
COMT
MPP5
TIA1
AIFM2
PFKL
BCL9
XRRA1
SPCS2
POLDIP3
PPP1CC
GMFB
LEMD3
DDX59
PLK2
STK11
ZNF185
SCAP
NDST2
CELF1
POLR3G
MBLAC2
DCK
ZNF236
UEVLD
DPYSL2
DNAAF2
ABCA5
PTPMT1
FAIM
SH3D19
GSAP
CTDSP1
TOMM22
ARHGEF12
DGAT1
EXOSC4
RAD52
ADK
LRRC37A3
NDUFC2-KCTD14
NDUFC2
HSPA9
TMEM168
REPIN1
UBE2F
KIF5B
APOLD1
H2BC7
H2AC7
DMXL2
SGTB
NLN
H2BC14
H2AC14
AGR2
DSTYK
DCAF8
RBL2
RPS14
COPS3
IMPACT
PTPDC1
COMMD10
UGCG
DGKZ
E2F7
SGPL1
GRK7
PAFAH2
PEX3
ADAT2
DIP2A
MRPS15
TACO1
VIRMA
COMMD2
C2orf42
IPO4
TTI2
ZDHHC7
LRBA
TM9SF3
MTMR10
PPP1R18
EEF2
YARS1
S100PBP
RPS8
ATAD3A
ZNF692
DYRK1A
RICTOR
HLCS
MFAP3L
NADK
LYPLAL1
RAN
PARD3B
NOTCH2NLB
NXF1
SCRIB
CCNC
NCOA3
ATR
PELP1
KLHL12
USP21
NFKBIZ
RRP8
ILK
SLTM
ATIC
MED18
CDC16
KCTD18
INTS10
PTBP3
L3HYPDH
JKAMP
ZNHIT6
PNMA1
PALD1
GPR39
INSR
UBE2E2
WWP1
KPNB1
C6orf226
TIGD1
EIF4E2
EXOSC6
HNRNPR
ARFGEF2
UBE2Z
STAMBPL1
PPIG
NDRG1
SF1
FAM20B
PDIA3
STK38L
SHTN1
HINT1
FAM168B
ATPAF1
GPRC5A
ETV4
UPF1
ARHGAP29
RABL6
SPOPL
KBTBD11
CLTC
EIF3F
BRF2
METTL9
IPO7
MRPL48
EIF2B5
NELFA
CRLS1
MAT2A
GNAI2
SDCBP
PABPN1
ZCCHC17
SNRNP40
MT2A
SKA2
PRR11
DYNC1LI2
ANKEF1
MET
MCTP1
SNX9
ZNF579
ALDH7A1
MRPL39
LRCH4
FBXO24
SIRT4
DYNLL1
EFCAB2
CRK
UBE2L3
RPL11
NKIRAS2
RHBDD3
EWSR1
INTS5
SRSF9
REPS1
DNAJC7
NUDT9
ZC3HAV1
SIK2
THEM6
GPAT4
FOXO3
ARHGAP27
SORBS3
ZCCHC8
PCIF1
H3-3B
RFX3
TXNDC15
ARAP2
SLC20A1
DHX9
RMC1
H1-0
EFNB2
PRPF39
SMN2
SMN1
LEMD2
RBBP5
MRPL27
EME1
CSDE1
KRT80
TRNAU1AP
GLRX2
ZDHHC21
PPM1A
ZNF699
SURF4
FAM47E
CHMP4C
SNX25
SCARB2
GCLM
SLC7A6
CFAP97
CDC42EP1
TRIM6-TRIM34
TRIM6
PPP5D1
CALM3
UBQLN1
YTHDF2
COMMD4
KLHL18
KIF9
MFAP3
FAM114A2
DYNC2I1
SLC9B1
MLEC
SMG7
MAPK8IP3
KRCC1
ACACA
N4BP2
KCTD3
GSTP1
DDAH1
PDK1
CAPN2
KATNAL2
STK3
PIAS2
CFAP92
ZYG11B
TXNRD3
BACE2
LPAR2
TMEM54
TSN
TBRG4
LANCL2
NUTF2
CENPT
UBXN4
MAZ
PPP3CB
C2CD5
KXD1
ZNF627
RSPH3
HMGA1
EIF4H
SCP2
PIP4P2
GDF5
CEP250
LMO4
ADGRG6
SMAD1
IRF2BP2
SPATA12
SF3A3
TEFM
RAB1A
RASEF
UBR4
ADSS2
PARP2