ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244180 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◣ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HIKESHI
SMPD3
FASTKD1
PHB
COX7C
IFRD2
BTRC
NUDCD1
CALR3
C19orf44
ZNF749
DDX23
KBTBD6
ZNF225
ST3GAL2
TMEM115
TMTC3
CEP290
C19orf53
INVS
ERP44
BOD1
CTU1
PAFAH2
GSPT1
TCEA2
NUDT13
NTAN1
CALCOCO1
SLC35B4
STK25
CLPB
BOLA1
CCDC146
ZNF189
MRPL50
SCRIB
MED15
LARS1
PNKD
AAMP
GFUS
PANK4
SNX17
EIF2B4
ING4
ATP5PO
C1orf159
UBAC1
TNFAIP1
IFT20
TSNAXIP1
RANBP10
ZFYVE28
CFAP99
ZFYVE1
RPIA
MMACHC
CCDC163
CCP110
C16orf91
SYMPK
FOXA3
TTC13
TMEM208
LRRC29
AHCYL2
TTC33
KBTBD7
ATP5F1D
AP2S1
PPP1R12B
ZNF56
ORMDL3
GTF2H4
SIRT2
NFKBIB
TTC1
PPRC1
ZNF235
SMUG1
CLEC16A
PPP1R12C
CNIH4
WDR87
SIPA1L3
RALBP1
PEMT
CTF1
SNX27
GATB
TSC2
NTHL1
MAD2L1BP
GTPBP2
TRAPPC3
CLDND1
SCNM1
LYSMD1
UCKL1
ZSCAN22
BUB1B
TMEM127
CIAO1
NOP14
GRK4
TMEM102
ZFYVE19
DNAJC17
LETM1
STAU1
RPL8
BUB3
ZNF420
ZNF169
UBR2
ZNF350
ABCF2
ZNF337
TIMM21
FBXO15
RPGRIP1L
FTO
VCPIP1
C8orf44-SGK3
CRTC2
NFXL1
NPRL2
CYB561D2
TFEB
PSMD11
GPKOW
ZNF384
ARHGAP9
MARS1
THRAP3
ING3
SMARCAL1
TMEM59
ZNF354A
ZNF444
RAD51AP2
NDUFS2
CCDC174
ZNF547
TRAPPC2B
DYNC1I2
TBL3
JOSD2
UFSP2
AP2M1
AKIRIN2
SEPTIN9
PHF13
CLP1
RAB5C
DESI2
POLR2E
FAM185A
ZNF32
CWC22
TSSC4
SLMAP
ZNF37A
ENOX2
RAB1A
SSBP1
PRRG2
NOSIP
RBM6
OSCAR
NDUFA3
STK17A
CHCHD3
TRAK2
STRADB
THYN1
ACAD8
DDX49
COPE
MICOS13
HSD11B1L
KAT7
LMNB2
UBQLN4
LAMTOR2
EXOC4
CHMP4B
BANP
SLC4A2
CDK5
DCAKD
NMT1
RAB29
SOX6
C11orf58
CNOT1
SLC25A19
RIC8B
DFFA
CCDC150
ZNF2
UTP11
DSTYK
ZC3H11A
ZNF419
PSMD2
UNK
ZNF554
MXI1
PSMC4
FBXO46
SCAF1
WRNIP1
PEX26
FEM1A
SERPINI1
PDCD10
MED27
HTRA2
B3GALNT2
WNK1
MRPL24
ZNF224
COMMD9
PHF12
ZNF133
RPL18A
FBXW11
PANK3
SEC61A1
VPS50
HEPACAM2
ZNF343
ZNF527
RALGAPA2
FDPS
AURKAIP1
FBXO48
APLF
ELOC
CAPN15
ZW10
IPPK
TMEM101
KBTBD8
ACTR1A
SUFU
SSR3
NCDN
KIAA0319L
RPS20
USP48
VIPAS39
AHSA1
RABAC1
TFPT
PRPF31
PSMD4
ZNF230
RANGAP1
VPS4B
GPT2
CNOT4
UBE2Q1
PA2G4
RPS6KB2
KMT2B
GPANK1
CSNK2B
GINS3
TMEM43
CHCHD4
ZNF484
USP31
WBP2
MED11
PCM1
NDUFB5
MRPL47
ZNF585A
TMEM245
VAPA
GID4
ATPAF2
PHB2
WDPCP
MDH1
WAPL
UCHL5
RO60
PGBD4
EMC7
UBL7
INTS1
ZNF773
RPS13
LEMD2
DDX47
IGSF8
CCDC90B
SCAMP4
ADAT3
DCAF1
PRR14
L3MBTL2
RETSAT
ZNF25
TOR1AIP1
RPS26
COPS7B
PDE6D
TMEM160
PSMB4
SCAMP3
RPS3
ZNF586
PRCC
SSR2
ZNF26
C12orf43
LTA4H
ZNF599
ZNF451
ZNF140
NFKBIL1
ATP6V1G2
RPS7
FAM193A
SKIV2L
NELFE
C1orf109
CTDP1
CNOT6
CIAO2A
METTL3
EIF1B
GFM1
BICD2
ZNF226
SYPL1
ZNF416
MED24
CDK5RAP2
NUP205
ZNF776
CDK8
PIGU
TBX6
WDR53
FBXO45
ZNF747
USP35
KCTD21
EIF5B
TXNDC9
ILF3
TMEM33
TIMM13
PES1
ZNF17
DNAJC28
GEMIN6
EXOSC4
RPL34
COPS7A
THAP1
DDX25
PUS3
XPOT
HSPA13
DEDD
RACGAP1
WASF1
CDC40
ZCCHC8
NOLC1
DNM1L
PHF23
SEC11C
PTBP1
TMEM186
PMM2
METTL26
CARS1
RAB30
PSMB6
THOC6
HCFC1R1
EIF2S2
ZNF805
TOGARAM1
KLHL28
SDCCAG8
CEP170
ZNF227
MORF4L1
INO80B
KATNB1
HMBOX1
INTS9
ITPR1
MED23
BET1
QTRT2
CCDC191
PNPLA6
MAX
UBA1
DCP1A
FAM222A
WASHC3
KHDC4
VEZT
FGD6
CRK
SKP2
LMBRD2
TERF2
ACLY
RBL1
NUF2
RAB3C
TRAF7
TRMT1L
SWT1
NUP153
TMEM69
GPBP1L1
SNRPE
MRPL20
PRAF2
ZNF221
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TMEM94
TXNL4B
DHX38
ZGPAT
ARFRP1
CFAP410
ABCC5
ZNF155
SUGP1
MAU2
ADSS2
SF3A3
NARS1
ZNF862
ZNF548
RPS27
ARMH3
RPP40
ZNF530
CCNT2
BOD1L1
MAF1
SYNGR4
ZMAT5
UQCR10
ZNF584
GPR108
SEL1L
ZNF567
NOP53
BDP1
RPL23A
GALM
SPHK2
RPL18
TSNAX
ZNF45
ZNF277
DOCK4
TMED9
MITF
NKIRAS1
RPL15
OPA1
DPM3
SERP1
EIF2A
SLC38A9
RAB7A
DGAT1
AHCTF1
TRUB1
MGRN1
PPP6C
CAND1
CCDC124
ZBTB7A
AQR
LUC7L
SUCLG1
RBL2
STRN
DPH2
ZNF764
ZCCHC4
SF3B2
MEN1
CCDC117
UBA52
LIN37
TMEM199
POLDIP2
DOHH
CSRNP2
PEX12
SAP30
SMN2
SMN1
RPL27
DARS2
CENPL
TSACC
CCT3
FBXL18
CXXC1
CWC25
IPO7
ABRAXAS2
VRK1
SH2D6
CNPY2
EIF3D
TOR2A
ZDHHC16
EXOSC1
VAMP7
POLRMT
FAM228B
SF3B6
NCBP2AS2
NCBP2
RAB8B
CANT1
ZNF417
SLC25A44
DHX8
CHCHD6
IPO8
PPP1R7
PASK
HEXIM2
EMSY
COPS8
CLPP
PRKCI
CUEDC2
IFRD1
INTS4
TOR1A
ZNF691
BLOC1S5
SHPK
CTNS
ASXL1
OSBPL11
MRPS16
FBXO38
SCYL3
LSG1
MEA1
KLHDC3
FBXL19
PSMA2
MRPL32
ZSWIM9
LIG1
RTEL1
PSMD10
ATG4A
PUM3
ZNF571
ZNF540
DUS3L
CDC25C
FAM53C
VKORC1
CAPN10
NUMA1
LRTOMT
SMG5
ZNF550
BIRC5
ZSCAN5A
SESN1
CEP57L1
ZNF304
CIAO3
HBP1
ZNF684
WDTC1
RPS3A
SETMAR
ALG10B
FBXO9
ZNF513
TCOF1
TMEM109
CDK9
REXO2
SLC37A3
CD2BP2
ESCO2
BABAM1
TOMM22
PPP1R13L
POLR1G
SNIP1
CMPK1
SNAPIN
CTNNBL1
DAZAP1
GALK2
COPS2
SHLD1
ZMAT2
ARPP19
APH1A
ZNF180
SPNS1
PNISR
RBM41
MRPL54
APBA3
DPM2
AP2B1
CBR4
SZRD1
WIZ
ZNF317
ZNF605
ZNF628
NCLN
TSN
RC3H2
DPP9
FAM149B1
ECD
ZNF500
EIF3C
EIF3CL
ITSN1
CRYZL1
DMAC1
ZNF436
TRABD
PSMC3
HIRIP3
ZSCAN32
ZNF174
TMEM147
MVB12A
SASS6
ZNF211
TPGS1
CCAR2
CFL1
MACC1
CCDC77
ELP6
FAM168A
GGPS1
ARID4B
TMEM150A
RAB1B
OAZ3
MRPL9
UBE2V1
USP15
TM9SF4
UBE2N
TOE1
MUTYH
SDF4
B3GALT6
ZNF165
RCAN1
TMEM222
MRPS22
PARK7
NAPB
CAMLG
TIMM22
YWHAG
DYNC2LI1
NAA38
CYB5D1
STX10
IER2
SNAPC3
NR6A1
ABLIM2
GMPPA
MTR
WDR46
PFDN6
ADO
ETFDH
C4orf46
RAD52
HSPH1
ZNF268
TTC31
CCDC142
FCSK
ZNF774
ACP6
RPL29
RPS19
ZNF772
PSMD3
ZBTB45
CACTIN
UFD1
CDC45
ATG4C
EIF3F
TMEM258
FEN1
DNAJC14
TAF8
ZNF286A
DNAJC11
SUCO
SPC25
SFXN5
CEP350
SMIM13
TTLL11
AKAP8
MBD1
RBBP5
NDUFS3
KBTBD4
RPS23
ATP6AP1L
ANGEL2
N4BP2L2
WRAP73
TMEM230
HSP90B1
TRMT2A
RANBP1
ZNF565
ZNF146
VPS41
IPO13
PRKCSH
CCDC151
XAB2
RPL12
LRSAM1
MIA3
UCK1
B4GALT7
COG2
ATP5MF-PTCD1
ATP5MF
ZRANB3
R3HDM1
BIVM
POGLUT2
KIF15
KIAA1143
PRPF4
CDC26
ATE1
LCORL
SLC33A1
GPR137
SUPT5H
EXO1
ZC3H10
PRPSAP1
YY1AP1
DAP3
SPEF1
NME1-NME2
NME1
NICN1
C7orf25
KPTN
CDC34
SNRPB2
RDH14
YIPF2
TIMM29
NUTF2
CENPT
LRPPRC
TUT1
REXO1
ZNF446
FAM207A
RPL37
MPI
CCNL1
ZNF850
MARCHF5
CPEB3
SSNA1
ANAPC2
MYBL1
GAPVD1
NUP107
ZNF460
KNSTRN
PCNX3
MAP3K11
ZUP1
MRPL19
MAMSTR
RWDD1
TTC37
ARSK
NUS1
AMD1
CDK19
CDCA8
RPP30
NSA2
GFM2
RPL22
NEDD8-MDP1
NEDD8
GMPR2
TRMT10A
MTTP
SART1
DHX30
ERI3
JTB
PPME1
C2CD3
SETDB1
DNAJA3
SMIM30
WDR18
METTL18
C1orf112
TSNARE1
ZNF181
TMEM214
CIZ1
DNM1
ADAT1
SERBP1
KIAA0930
MTMR9
XPO6
RNF121
LOC100133315
TAB3
TPR
ODR4
CEP128
DTX2
ZNFX1
TTC30A
NDUFS7
AP5S1
TIMMDC1
KCTD5
PEAK1
HMG20A
CDC6
DHX33
FIS1
SHOC2
BBIP1
KLHL24
TIPRL
YJU2
ZNF324B
NDUFB10
KAT8
COA3
CNTD1
RNASEH2A
MAP3K13
AKT1S1
TBC1D17
LRRC47
ZNF668
ZNF646
UBE2D1
NUP214
NUCB1
EXOC6B
LRPAP1
NFATC3
PURB
DIAPH1
C8orf76
FAM193B
MYL6B
OTUD4
CC2D1A
C19orf57
SND1
UBE2J2
HSCB
CHEK2
EIF2D
SIRT4
CLINT1
RPTOR
GHITM
MYORG
IQCH
AAGAB
GON4L
SLC30A6
PHLPP1
XRRA1
SPCS2
CCDC59
RNASEH2C
RBM28
THAP4
ATG4B
R3HCC1L
SLC35A5
ATG3
PPP2R5B
ARHGEF1
ZNF79
MRPS23
NDUFV1
NDUFA2
IK
CSNK2A1
MINDY1
PRUNE1
AHCY
C18orf25
ATP13A1
GDAP1
BRIX1
TTC30B
ABCF3
LRRC8A
KYAT1
TMCO1
NMNAT1
LZIC
KLHL20
POLR1B
SNX16
SH2B1
TUFM
FAM32A
TIAL1
MCM3
ZNF688
FTSJ1
ZNF134
LRGUK
ZSCAN20
PLEKHA1
SYT5
POLR2J3
NIP7
COG8
METTL17
ZNF721
PIGG
TPRKB
DMAP1
PGM2L1
POLR2H
SAMM50
IMP4
CCDC115
FKBP1A
PPIP5K2
GIN1
PAK1IP1
C6orf52
LMNA
MEX3A
API5
TARDBP
TTI2
CIC
CYCS
PAF1
PTRHD1
CENPO
LCMT1
BCORL1
MRPS15
YKT6