ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375362 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◣ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NLRP12
NFKB2
LAMP1
GATA4
CMPK2
WDFY3
SPATC1
ABT1
PLSCR1
STEAP4
PGK1
BOD1
PDLIM2
CALR3
C19orf44
GSTA4
XRCC5
NIBAN3
EXOSC4
IFRD2
FEM1A
SCNM1
LYSMD1
H4C11
SMPD3
ZNF444
CTTN
CALCOCO1
GSPT1
RPS19
H4C12
CHMP4B
DCP1A
RNF149
SCAF1
UBXN8
NUDCD1
DYNC2H1
NUTM1
NOP10
DDX58
PEX3
ADAT2
GBA
TMEM243
NDUFS7
KBTBD6
MTF2
NBEAL2
DCAF12
NBN
MICOS13
HSD11B1L
ZCCHC4
SH3BP2
ZNF221
JRK
PANK4
MEF2C
EXD1
CHP1
FBXW4
NDFIP2
MED23
PNKD
AAMP
PPP1R12C
TOR1AIP1
MTMR9
DPY19L4
TSSC4
GRPEL2
TSNAXIP1
RANBP10
HMBOX1
INTS9
ARHGEF1
APOL6
MTIF2
SIGLEC1
ZBTB45
TMTC3
CEP290
ST3GAL2
PAFAH2
CLPB
POMP
KBTBD7
PGBD4
EMC7
ZC3HAV1
H2BU1
H2AW
CD1A
TBPL1
TYROBP
PEX12
CYP4V2
H4C15
H4C14
GNG2
C1orf159
JOSD2
CCAR2
RPS20
GTF2H2C
GTF2H2
TLR4
ZC3H6
SLC1A5
ZNF554
UCKL1
TPRKB
MAPKAPK3
CISH
USP3
GTF2H2C_2
FAM207A
MRPS31
PPP5D1
CALM3
HIKESHI
PEMT
VAV1
BANK1
LRRC37A3
KMT2B
DRG2
RIPK1
TMEM115
FBXW11
BTRC
CD33
ARID5A
SF3A3
FRG1
TMBIM4
SSBP2
MEFV
KANSL3
SLC39A13
SYMPK
FOXA3
H2BC18
H3C13
NUF2
DOCK8
FRA10AC1
MS4A3
PTK2
NOTCH2NLA
FAM227B
DTWD1
MRPS18C
HELQ
PPP6R1
AURKAIP1
CTU1
ZNF76
TCEA2
ICAM1
TIMM21
FBXO15
VCPIP1
C8orf44-SGK3
ZSCAN22
IPPK
BORCS7
TMEM91
B9D2
E2F4
MINDY3
PLEKHM3
PRKCE
TMEM222
TRDMT1
ANKRD40
SLC24A1
INTS14
AP2S1
BAZ1A
LTBR
ABCF2
MRPL24
CCDC9
RNF220
HIBCH
FLT3
NOTCH2NLC
WNT2B
INO80D
ITGA4
ARPC3
UNC45A
ARHGAP25
TAL1
SPATA24
LRRC59
THAP1
LCMT2
ADAL
RBCK1
H4C3
SSBP1
BECN1
GNB4
NR3C1
PROS1
SCRIB
POLE4
CCDC7
GHRL
DDX23
SPPL2A
POLRMT
H1-4
H2BC5
RMDN2
ZNF333
GTF2H3
EIF2B1
CHMP7
IPCEF1
LARS1
TOMM22
MMACHC
CCDC163
RRM2B
BNC2
GFUS
TMEM68
TGS1
VPS13B
CHCHD5
DENND4B
DRAP1
C11orf68
NDUFS3
KBTBD4
RPL29
ASGR2
PPRC1
FAM228B
SF3B6
RNPEP
TAF1B
NSMAF
MRPL34
NEDD9
RASA1
RPS15
SIRT2
NFKBIB
APPL2
EIF2D
ZC3H3
JMJD1C
ZNF780A
SNX17
EIF2B4
ANXA2R
MAPK1IP1L
RPS3
KEAP1
ZNF148
SLC35F5
COX18
FUT10
NSFL1C
SLTM
INTS12
GSTCD
DNAJC11
RAC2
AARS2
H1-2
MRPS28
ALDOA
POLR2J3
RMND1
ARMT1
CCPG1
C15orf65
ZFYVE1
MITD1
RUBCNL
INVS
ERP44
TTC33
BRF2
DR1
DPY19L3
KASH5
UCHL5
RO60
FBXL19
INO80C
OPA1
H4C4
ZNF410
ELOB
ZNF286A
LTB4R
ZNF350
ATP5MPL
FNTA
PHB
SLC44A1
SEC14L1
PSMF1
HMGB1
USPL1
NTAN1
ZNF749
POR
FLOT1
CYRIB
CTSG
SIRT6
ANKRD24
SNUPN
RHOT2
TIMM10
CLDND1
ZNF180
PEAK3
MOB4
CHD1L
PRKAB2
ANKRD18B
PSMA8
TNFAIP1
IFT20
TMEM229B
ASNSD1
ASDURF
CEACAM21
ENOSF1
ZAR1L
BRCA2
RPS6KA1
LILRA2
RPL5
REXO1
FBXW7
PIP4K2B
SMC6
GEN1
HIF1AN
DSCC1
PA2G4
HNRNPUL1
TSC2
NTHL1
NCBP3
PCM1
RPL27
TRIM25
EFCAB2
TRIM44
SDHAF3
AP3M2
GTF3C6
WDR87
SIPA1L3
RAD23A
RSU1
RASSF5
SLC33A1
TSG101
ARHGEF18
RFESD
REX1BD
FZD1
HCK
AP2B1
RPP38
WDR55
RALB
TSSK6
NDUFA13
KCTD18
ARMH3
OBI1
TSC1
GFI1B
TMEM242
ZNF225
PRRG2
NOSIP
NDUFB7
KMT2A
RAB4B
RPIA
SDSL
C6orf89
SGF29
REEP3
RNF125
DNAJB2
TCTE3
ERMARD
CCDC114
ANKRD46
PARK7
RSAD1
DCLRE1B
AP4B1
SMPD1
SPRED2
TMEM208
LRRC29
SIRT1
INTS10
TRIB1
YES1
MRPL44
CCER2
DSTYK
SNRNP200
DHX8
SLC35E2A
TEFM
PGBD2
TMEM123
INPP5D
CCDC152
RPS7
EXOSC3
ZNF557
PIK3CG
TFPT
PRPF31
DGAT1
POLR3B
DISC1
BLOC1S5
PSMA1
GTF2A2
RBM17
H4C9
UTP3
C1orf53
CFAP298-TCP10L
CFAP298
DMAC2
PNPLA6
RRS1
UNK
MDM4
MRPS23
TRAM1
H3C8
LSM14A
COPS7B
COPS7A
PISD
ZSCAN30
PRICKLE4
FRS3
RMDN1
CCDC97
NCLN
MARCHF7
RFC2
CRH
ECSIT
NUP54
NOTCH1
SVBP
ERMAP
CAPN15
ZNF235
THOC3
FKBP1A
PEX2
ANKRD13D
H4C1
H3C1
LST1
RAD54L2
RBM28
HSPE1-MOB4
HSPE1
HSPD1
ATXN2
SNRPB
ZNF226
MRPL3
H2AC16
CCDC88A
CCDC124
TSPAN10
NPLOC4
MACROH2A1
HIGD2B
BBS4
CCDC150
GARS1
C10orf88
CIPC
NFKBIA
APBB1IP
C16orf91
PPP1R12B
CRTC2
SLC4A2
CDK5
HUS1
WASHC4
CPQ
SEC13
TXNDC15
MYC
H2BC21
H2AC20
H2AC21
RCOR3
MRPL1
LYNX1-SLURP2
LYNX1
UBIAD1
EEF2
FEM1B
CAPNS1
ZNF558
FIGNL2
HEXIM2
YARS1
S100PBP
THEM4
PTK2B
TRIM35
NEUROG3
TRAK2
STRADB
HINT3
ELAC1
USP15
NCF2
CCDC59
PPIL2
BIRC2
TEX22
H3C7
H2BC9
TBL3
C8orf33
SIGLEC6
TNNI2
BRIX1
TLN1
CREB3
UPF1
STING1
CTDP1
ATG16L1
TMEM147
ZNF623
IQGAP2
STOML1
MRPL16
FRAT1
SLC25A6
SERPINB1
TRIP4
LONP1
CATSPERD
CDKN2AIPNL
SELENOH
MCOLN1
GSK3A
WDR41
HENMT1
BRWD1
SOX6
C11orf58
MAN2C1
PDSS1
ACTR3
ZNF512
UBR2
GABPB1
CLK3
B3GAT3
SCAMP1
GAS6
POMZP3
SLC35B4
SYCE2
MYO18A
IL1RN
STAT1
SMIM20
UBLCP1
H3C3
NME7
BLZF1
RUVBL1
SNAP47
JMJD4
EEFSEC
QSER1
NINJ2
MRPL21
IGHMBP2
ZNF56
ZNF567
MED4
S100A13
CHTOP
H2BC11
H2AC11
TBRG1
NDRG1
RPRD2
KLHL20
MRPL38
MAK16
MFSD3
INSC
PRCC
ELOC
B4GALT7
SH2B1
TUFM
TATDN1
NDUFB9
MRPS33
CAB39
ARHGDIB
AHCYL2
WDR70
RCBTB2
MRPS35
STK25
PLD3
C19orf47
AVEN
PIK3AP1
IRF9
P2RY14
FASTKD1
ZNF594
SELENOT
SUGCT
MPLKIP
SMAD5
SMARCD2
ARHGAP4
TACO1
PPP1R8
LDAH
SLC25A32
DCAF13
STYK1
ALOX5AP
SPHK2
RPL18
REXO4
IRF2
CA13
POGLUT3
DST
BEND6
ERLIN2
EIF1B
ATXN7L2
EIF3G
TNFRSF10A
TMEM41A
TCF3
TRMT2A
RANBP1
VKORC1
PSMD9
HPD
DCLRE1C
ORMDL3
RIC8B
CRBN
UBA52
C5orf51
SAR1B
AQR
NSA2
GFM2
SUGT1
NELFB
TRIM28
RALBP1
WASHC5
NSMCE2
DDX1
POLG
ORC2
RAVER1
NACC1
NCF1
NCBP2AS2
NCBP2
TCF12
TIMM50
TVP23B
CNTRL
RNPS1
POLR2M
DDX18
PET117
KAT14
GABPB2
ZNF331
TNIP2
CCDC90B
TRIM13
UBE2F
KAZALD1
CSPP1
NPRL2
CYB561D2
VPS50
HEPACAM2
FAM3C
UBR1
DPP8
SEC11C
CDK5RAP1
RPL37A
RNF6
IDNK
MTBP
MRPL13
IL16
PPM1M
ZFYVE19
DNAJC17
LUC7L2
ZNF302
TTC14
UBE4A
FMC1-LUC7L2
FMC1
CCNT1
TARS3
PPCDC
KMT2D
SURF6
SNRPD1
C17orf75
TRMO
IPO4
SFT2D3
EXOSC9
FADS2
TCF4
ERMP1
FADS1
RBIS
TOB2
DNAJB12
H3C15
H3C14
NOC3L
RPL26L1
NREP
DOHH
POLR3D
PARP2
MTPN
LUZP6
MEMO1
MORF4L2
EMB
STOM
IFI35
LCE3A
VIRMA
RNMT
FAM210A
ZC3H4
RABGGTA
COPS8
KLLN
PTEN
PRKCSH
CCDC151
UHRF2
TM6SF1
BICD2
RPS16
RAD52
LSG1
USE1
KMT2C
H1-5
GTF2H4
VPS16
PCED1A
MX1
RPGRIP1L
FTO
THAP12
GVQW3
REPS1
VWA8
LMO2
CCR1
TMEM59
TERF2
CLPP
RARS1
HAUS5
PGS1
TXNL1
ZC3HC1
UBA2
CELF1
WDR82
HDDC2
ADPRS
RBSN
RAB39A
ASPHD2
STAP1
CGAS
GOLGA3
LIN37
NMI
RPL8
IPO11
COMMD1
CCT4
TARBP2
SUMF1
ZCWPW2
AZI2
MBNL1
NOXA1
EPC1
MYO9B
HAUS8
PRR19
PAFAH1B3
ZNF341
CARD8
CCDC149
ZNF579
VPS37A
CNOT7
SNRNP70
RPL3
GOSR2
ATP13A1
TEX261
PPP3CC
SYK
CCNL1
MRPS15
THUMPD3
FOXP1
FAM160A1
CLTC
MAD2L1BP
GTPBP2
ANKRD17
ZCCHC3
EHD1
MYL12A
GAPVD1
PSMB7
ZNF219
ZNF397
CATSPERG
BCL2A1
ZNF384
IPO13
LMAN2
N6AMT1
ABCB10
BORCS5
PPP1R11
GATB
SPNS1
MRPL4
MMAA
C4orf3
TBC1D5
ZSWIM9
LIG1
ZNF628
ANKRD36
MTO1
TMEM199
POLDIP2
BOLA1
RPL6
FAM193A
RAD50
IBA57
PSMD11
METTL9
YIPF2
TIMM29
MICU2
CCDC146
RPS3A
NOC4L
DDX51
GORASP2
TMCO1
ADCK5
C3orf86
MSRA
CTNNB1
ZW10
ZBTB17
ZNF212
MED15
AP5S1
RPS8
ADAR
C5
SETMAR
NEK4
AP4E1
IMPA1
STK36
RNF25
EEF1AKMT1
TSN
NKIRAS1
RPL15
PSMD8
TPR
ODR4
ANKRD36C
KLHL9
NAPEPLD
ZBED4
RNF169
SIPA1
BANP
MRPL20
RFXANK
BORCS8
ZNF518A
ARID2
STAMBPL1
ATF7IP
HERC6
CWC25
ZNF140
ZMPSTE24
GTF2IRD2B
PRKAG1
ASB6
ATP5MC2
UBE2V2
SLC39A10
ARHGAP24
ZNF268
ZNF507
TTLL12
MED18
H2BC12
H2AC12
TMED1
ETV6
TBRG4
DCAF10
TOP3B
ZNF2
ZNF527
SDE2
TSNARE1
STAU2
TGFBRAP1
MPG
DPP9
SRP9
SRCAP
LOC730183
EIF1AD
BANF1
DUSP12
PRPF18
COX8A
PDCD2
PTPN2
BPTF
TAF5
RPL36
EPN1
EIF3K
MAP4K1
PEX7
THEM6
RTTN
ATIC
PRKCQ