ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1013342 | HuCCT1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◣ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MTRNR2L8
MTRNR2L2
RGPD2
RGPD1
MTRNR2L9
MTRNR2L10
F3
CYP4F11
FRA10AC1
STX16
DCAF10
DCBLD2
SLC44A1
MRPL21
IGHMBP2
H4C5
AREG
DDX23
MTF2
IFRD2
HEXIM2
LAMP1
CCNL1
CTNNB1
FEM1A
ZC3H6
CLTC
DSTYK
COPS7B
CALR3
C19orf44
EIF2D
NOTCH2NLC
TBL3
TIMM21
FBXO15
TMEM41A
STX18
ABCF2
NCBP2AS2
NCBP2
CALCOCO1
BRWD1
UCKL1
TSNAXIP1
RANBP10
ATAD2
PPRC1
DCP1A
UBC
PPP5D1
KMT5B
CALM3
PAFAH2
UNK
GSPT1
TMEM199
POLDIP2
POLR2J3
WDR53
FBXO45
SOD2
NOTCH2NLA
WTAP
TMEM222
SPATC1L
GATB
CALM1
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
TSN
SPNS1
CCDC88A
TOMM22
MRM3
GLOD4
SEC13
NDUFS7
ZSCAN22
CYCS
ORMDL3
MRTO4
EMC1
LRP6
TCF3
NOTCH2
AURKAIP1
CALM2
RPL8
COPS8
TIMM22
KBTBD7
UBB
BTRC
NUP214
CNOT1
NMNAT1
LZIC
TMEM115
PEMT
SMN2
SMN1
CCDC77
NDUFS3
KBTBD4
WDR74
C16orf91
DOHH
ST3GAL2
CFAP410
CHMP4B
MED23
SYMPK
SCAF1
CTDP1
ZNF337
POMZP3
KMT2D
BOD1
TRIP4
KPNB1
RPS3
AP2S1
PSMD3
AMD1
PRCC
AHCYL2
TSSC4
WASHC2C
FOXA3
PNKD
RPS20
IST1
AAMP
SNX17
EIF2B4
ING3
TCEA2
PEX3
ADAT2
PA2G4
GSTA4
HTRA2
CDKL3
ADPGK
CKS2
ZNF212
HMGB1
GTF2H3
EIF2B1
CLEC16A
SMPD3
THRAP3
WASHC2A
HEXA
PEX26
NAGPA
KCTD9
CDCA2
KBTBD6
MRPL24
PHIP
RPL22
ZFAND2A
TTC13
TSC1
GFI1B
NUDCD1
PPP1R12B
MED15
DDIT4
HIKESHI
TRIAP1
ZNF721
PIGG
UBE2B
ZCCHC4
RPS6KB2
USP30
MCM7
AP4M1
NUF2
UBE2D3
NOTCH2NLB
NXF1
RPL18A
ATP5MF-PTCD1
ATP5MF
KDM5A
RPS28
NDUFA7
H2BC21
H2AC20
ATG14
ZKSCAN2
OSCAR
NDUFA3
INVS
ERP44
CRTC2
SCNM1
LYSMD1
ZBTB45
PKM
MICOS13
HSD11B1L
TMEM127
CIAO1
USPL1
MAD2L1BP
FAM207A
IPO11
MAF1
OAZ3
MRPL9
KCTD5
PNRC2
H2AC21
TOB2
RPIA
PANK4
SCRIB
C8orf33
GTPBP2
NPRL2
CYB561D2
ZNF444
CDC25C
NOP14
GRK4
TMTC3
CEP290
PPP1R12C
WDPCP
MDH1
RPS26
TRAPPC3
GPAM
DNAJC11
TNFAIP1
IFT20
RANGAP1
DUS2
DDX28
FAM53C
DIP2A
PHB
ZW10
CYP51A1
SLC35B4
SMG5
EIF4A2
UBR2
MXD4
ATXN2L
C1orf159
MAPKAPK5
BRIX1
ZNF384
SRSF11
RBM42
TMEM208
LRRC29
MRPS15
ZNF56
CCAR2
NUP153
PGBD4
EMC7
KAT7
FUS
UBQLN1
CUL4A
TBRG4
RLF
ALKBH3
HMBOX1
PSMD11
PINX1
MRPS35
MFN2
DNAJA3
UBE2Q1
BOD1L1
SLC25A19
UBQLN4
LAMTOR2
C19orf53
COMMD1
KDM4B
ADNP
HMGCL
DPP8
DCAKD
CCT4
GHITM
BANP
PSMF1
CCDC146
NSFL1C
ZFYVE1
FBXW11
GID4
ATPAF2
NME1-NME2
NME1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
DPP9
TAF5
MMACHC
CCDC163
AP2M1
PBLD
HNRNPH3
RIC8B
STK25
LRRC40
SPRYD4
PCID2
TRIP12
FBXO36
INTS9
LUC7L
NMT1
SLC33A1
NOC4L
DDX51
VPS37A
CNOT7
TTC33
MRPL20
TOR1AIP1
UCHL5
RO60
ENDOV
DOLPP1
AHCTF1
ZNF420
CIC
ZFYVE19
DNAJC17
PIGU
ZGPAT
ARFRP1
TEPSIN
NDUFAF8
NTAN1
SP2
RBM6
CSRNP2
SPTLC1
HNRNPAB
COMMD9
STAU1
ACOX3
ARHGEF12
IDH3B
LETM1
DNAJB12
ZC3H10
RCL1
TCF12
SMARCAL1
RPL29
ABRAXAS2
EIF3F
MRPL58
TFPT
PRPF31
RALBP1
BIRC5
LONP1
CATSPERD
SECISBP2
TRMT44
GFUS
UBL7
PHF13
HSP90AB1
H1-4
SUPV3L1
MTMR2
GTF2H4
GTF2I
ARF4
SNAPC3
TSC2
NTHL1
ZFPL1
CDCA5
FDPS
COQ9
CIAPIN1
DDX49
COPE
ARHGAP9
JOSD2
COG2
HSP90B1
CTU1
ZNF749
ELOC
GTF3C5
SART1
PIK3R3
MRPS16
TRAF7
RCOR1
MARS1
SNRNP70
RAB5C
TMEM59
H2AX
BOLA1
RPL12
LRSAM1
DCAF8
DCAF1
WASHC5
NSMCE2
RWDD1
DDX1
PARL
NDUFV1
WAPL
DESI2
CAND1
PHF12
RPS7
MRPL39
CHCHD3
TRAK2
STRADB
B3GALNT2
IP6K2
GABPB1
SOX6
C11orf58
SSBP1
CRBN
VCPIP1
C8orf44-SGK3
TOP3B
COX7C
SLC7A6OS
PRMT7
CCDC59
WDR87
SIPA1L3
MCU
PNRC1
TTC4
PSMD2
SF3A3
TRMT61B
CANT1
ADPRS
SLC3A2
USP48
PRKACA
PABPC1
POLG
THYN1
ACAD8
SLC24A1
INTS14
BICD2
SIRT2
NFKBIB
IPPK
SKIV2L
NELFE
SMIM13
PSMD4
SSR3
METTL9
THOC6
HCFC1R1
BRF2
FAM228B
FAM149B1
ECD
UBE3B
ZNF148
GTF2H2C_2
PLEKHM3
TIMM13
GFM1
NDUFB5
MRPL47
CCDC90B
ZNF500
RPS16
RPS19
ATF4
KLLN
TARBP2
MANF
H2BC18
TMEM217
TBC1D22B
TMEM242
COQ7
TRUB1
VIRMA
H3C13
RUVBL1
COPS7A
NOLC1
LARS1
UBA52
RPLP1
PTEN
NKIRAS1
CMTR1
SESN1
DNM1L
DPY19L4
COA6
SERBP1
HAGH
FAHD1
POLR2E
ASXL1
RFXANK
BORCS8
CFAP20
CDKN2AIPNL
EIF4A1
H4C15
H4C14
TFRC
SPRED1
ZC3H3
CAPN10
PCBP2
RPLP0
CLP1
ACTR1A
CACTIN
BUB3
KAT8
NDUFAB1
NLK
ATRIP
HPS4
WBP2
TMEM230
BUB1B
GTF2H2C
SF3B2
PARK7
NEURL2
CTSA
TACO1
XRRA1
SPCS2
REXO1
RCOR3
KMT2B
ZNF225
RNASEH2C
FAF1
SRP68
ZER1
ZNF518A
SLC4A2
XPOT
RPL15
PHB2
H4C11
SLX1B
SLX1A
BOLA2B
BOLA2
WRNIP1
TIGD6
HMGXB3
PALB2
DCTN5
CWC25
BMS1
MRPS11
MRPL46
RANBP2
CFL1
DFFA
USP15
ZFYVE28
WDR25
WARS1
CCDC150
ZNF189
MRPL50
CCP110
CEP350
C5orf51
SEC11C
RPP30
FBXO46
CFAP99
EIF2S2
UBN1
GLYR1
VCP
RPL23A
HIF1AN
PTBP1
MDM4
NOL10
ZNF140
CHCHD6
SUMF1
SNRPD3
GUCD1
RPL3
SPHK2
CDK8
SUGP1
SELENOH
MAU2
C19orf48
DGAT1
RAD23A
CCNT2
SEC61A1
C12orf43
SRSF2
MFSD11
PHAX
CDK5
TRMU
WDR4
RAB1A
POLR3D
B4GALT7
NCDN
KIAA0319L
CCDC124
ZNF451
SRRD
TEFM
MRPL3
FAM156A
VPS33A
TMEM69
TATDN3
NSL1
ZNF2
SMIM12
ZNF527
PANK3
FAM156B
CLDND1
PEPD
HIRIP3
CNPY2
CAPN15
CNIH4
RPL18
PPIA
RTF2
LRCH4
FBXO24
TOP3A
SMCR8
SFSWAP
KPTN
RTTN
UBAC1
TOP2B
IPO7
COMMD2
ZNF133
RPS3A
CNOT4
AKIRIN2
ZNF805
AP5Z1
FANCD2
RPL6
WNK1
CCDC86
ATP5PO
SRSF1
SRPRA
SPRYD3
RASEF
H3C15
H3C14
MRPL48
TOR1A
L3MBTL2
TSFM
SNAP47
USP35
KCTD21
MRPS23
JMJD4
DDX46
GPBP1L1
TIMM50
ZNF335
DYRK1B
SDE2
ZBTB4
MAGOH
PKN2
SEL1L
RTEL1
SCAMP3
DUS3L
FASTKD1
POLR2A
SERPINI1
PDCD10
USP42
CASC3
TAS1R1
NOL9
RBSN
TMEM258
FEN1
BOLA2-SMG1P6
RAD54L2
CDK5RAP1
EXOSC4
CCNC
KDM4A
GATAD2A
RPLP2
GPANK1
CSNK2B
SLMAP
SURF6
TBC1D22A
HBS1L
EIF2B5
MTR
FAM133B
CCNI
MRPL44
PPP6C
PSME3
CIAO3
ABT1
RPTOR
HNRNPL
AARS2
RERE
MRPL4
IARS1
FBXW2
SUFU
DRG2
H4C12
SERP1
EIF2A
PDCD4
UFSP2
DYNC1I2
EFTUD2
CCDC103
EIF1
TMEM186
PMM2
RAB5IF
C12orf73
TMEM160
REXO4
MXI1
TMEM43
CHCHD4
TFEB
EIF5
CLCN7
TUBGCP3
MON2
ZNF26
PPIL4
ZC3H11A
H2AC19
H2AC18
ECSIT
VIPAS39
AHSA1
APTX
DNM2
PDE6D
LTO1
NUS1
PCM1
ACAD9
GARS1
VPS4B
TBCCD1
EIF3C
NDUFS2
CHCHD1
TBCB
POLR2I
PSMD8
WDR43
VPS50
HEPACAM2
TVP23B
AJUBA
SH2B1
EIF3CL
SRP9
ZNF567
INTS1
CBWD5
FBXO48
APLF
FAM227B
DTWD1
ZNF554
TUBGCP6
BDP1
RPGRIP1L
FTO
ZSWIM9
LIG1
EIF3D
API5
NFYC
MIA3
RAD52
RFX1
MRPL37
CYB5RL
AKAP8
STOML2
ARFGAP2
ZNF419
POR
MRPL55
RBM28
ATP5MPL
SNRPD1
NBPF1
MYLIP
DHX33
ZNRD2
THOC1
UMPS
FAM204A
CBWD2
ATG7
SSU72
LANCL2
FAM185A
POLE3
C9orf43
GPR108
ARNTL
YIPF2
TIMM29
MAN2C1
EXO5
EIF5B
TXN2
POLR3F
DZANK1
FAM222A
ZSWIM7
TTC19
CDK11B
CALR
PNPLA6
TRMT2A
RANBP1
HUS1
PRDX1
PMPCA
ENTR1
FAM193A
GTF2H2
NCOA3
PPP1R8
TSR1
SGSM2
WDR11
SCAMP4
ADAT3
CHMP1B
EXOSC3
WDR18
TFB2M
CNST
SEPTIN9
SESN3
SNX27
VAPA
ZMPSTE24
TUFM
STK17A
ABCC5
DDX19A
ZNF436
UBR4
VDAC2
ERLIN2
GOLGA1
METTL26
DNAJA1
ADK
MTMR9
MRPL12
DIABLO
CBWD3
ZNF235
YWHAG
CDK5RAP2
CCNL2
SNAPIN
ILF3
CCNG2
LRRC59
NDUFA10
ZNF17
KHDC4
UBIAD1
ATR
DDX41
MARCHF5
CPEB3
MIS18A
TXNDC9
IPO13
TMEM245
THOC3
LMAN2
TMEM248
NFXL1
STYXL1
PELP1
EIF4A3
SRSF6
ABCB8
GTF2IRD2B
ATP5F1B
UBAP2
RETSAT
NUP54
RPS23
ATP6AP1L
SAP30BP
RECQL5
RPUSD4
RNMT
FAM210A
FAM118B
RPS15
PPT1
NIP7
COG8
HSPE1-MOB4
HSPE1
HSPD1
ZSCAN32
ZNF174
ARMH3
ZCCHC8
NOM1
ADSS2
TMED9
ASH1L
LZTR1
SLC44A2
GTF3C3
NOL7
SRCAP
SNRNP200
LOC730183
C15orf40
POLR2J
LRRC37A3
RMDN3
TRA2B
VKORC1
SAR1B
SUCO
EEF2
IFRD1
RPL13A
TPR
ODR4
TAF15
H1-2
RALGAPA2
ZNF398
PARP2