ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144542 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◣ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

GSDMD
VAV1
CYB561
TBKBP1
OPRL1
RGS19
CPXM1
DCAF10
TMC8
MEF2C
INTS12
GSTCD
SMG8
ARHGAP25
FRA10AC1
NFE2L2
RPS6KA1
NBEAL2
C3orf86
RAB37
HHEX
DUS1L
DPY19L4
ARSG
SLC16A6
EXOSC4
RXRA
LGR6
NKX6-3
CD33
TPM3
RASAL3
MTRNR2L2
CACNG4
CCDC149
DMAP1
WDR74
B4GALT7
ARHGAP4
SIPA1
ABT1
SDE2
IL17RE
DSTYK
LAPTM5
FKBP1A
CSF3R
ZER1
ERLIN2
NIBAN3
LST1
SHANK3
STXBP5
NME1-NME2
NME1
TNFAIP8L2
TACO1
NR1H2
TCTEX1D1
SIRPB2
ANKRD13D
C17orf75
NSA2
GFM2
WDFY3
CRACR2A
TCTEX1D4
BTBD19
ZNF384
TBC1D19
TACC1
PLEK
NTNG2
TOR1AIP1
GMFG
CCL4L2
BMS1
SPN
NFKB2
TOP3B
USP15
RNF220
CDYL
NDUFS3
KBTBD4
POMP
ZNF595
STX16
RPS19
MAN2C1
GRPEL2
CNPY1
EIF1AD
BANF1
SEC14L1
TMEM154
IL16
CALML4
CNPY3
CCDC170
TMEM242
CCAR2
SAR1B
ARHGAP30
MYO1G
ACBD5
CPSF1
UNC13D
LUZP1
STAT1
NFKBID
ACY3
HCST
ARAP1
GTF2H2C
GTF2H2
MITD1
SCML4
DDX1
IL6R
S100A9
SNUPN
ADAM10
STAT6
GABPB1
GALK2
ANKRD17
COPS2
LIMD2
RASGRP2
P2RY8
LILRA2
SIAH3
CCZ1B
DUSP3
TBC1D10C
CFAP97D1
AP3S2
ELMO1
SIGLECL1
FFAR3
USP30
PSMF1
PPFIBP2
NLRP3
TTC4
E2F4
DENND4B
COX16
TLR1
ZNF408
ARHGAP1
APPL2
MCTP1
CCL19
SEPTIN9
HIGD2B
BBS4
SULT1B1
HIF1AN
XRN2
LTB4R
CALR
DUSP6
PIK3CG
RGL4
GTF2H2C_2
RAD54L2
ARPC3
RSU1
THUMPD3
ARHGEF12
MYL12A
NCF4
CBFA2T3
NDUFS7
SIRT4
KBTBD2
LAIR1
IRAK3
GHRL
PEX3
ADAT2
SDHAF2
CPSF7
TMA16
FOXI1
TSPOAP1
SNAP47
JMJD4
IPO4
NELFB
TRIB1
PPP1R16B
ATP2A3
DLX4
P2RX1
SLC39A3
CHRM3
PSTPIP1
FAM227B
DTWD1
LMO2
SNRPD3
GUCD1
MTIF2
HNRNPA1L2
NEDD9
GPR68
PARVB
GIMAP1-GIMAP5
GIMAP1
LRRC59
GTF3C3
AAR2
YWHAB
SEC22B
CEBPE
CASC3
TM7SF3
NCF2
AIF1
TSSC4
TNFRSF1A
TMEM41A
SCNM1
LYSMD1
CDK5RAP1
TAF12
NOXA1
RNF149
SNX10
AGAP2
JRK
TRAF3IP3
DNAJC25-GNG10
DNAJC25
TUT1
CHCHD5
ALKBH3
MTMR9
MRPL1
TMEM123
MRPL58
IPPK
DNAJC2
GAPT
AURKAIP1
ADPRS
UBXN8
ZNF622
NOS3
INPP5D
NEK6
HPCAL1
C1QTNF1
ADRA1A
NEFL
MAF1
RTEL1
TTI2
URM1
RASSF5
STAP1
LYG2
GSTO1
CAMP
CLTC
H4C12
CENPC
PIGV
PRKAA1
BPI
MS4A3
SLC39A13
SH3BP2
TGIF2
H4C15
H4C14
WDR36
FERMT3
DCP1A
C12orf57
ZNF391
OSM
MPO
GALNT3
ULK4
MAP1LC3B2
MLEC
ZNF696
PDE4D
IPCEF1
IFITM2
FAM207A
SEC14L5
TRPM6
NADSYN1
TRIP4
MRTFA
NOP16
HIGD2A
GNAI3
MILR1
TPRKB
PMVK
SUPT7L
SLC4A1AP
LDB1
GSN
ADA2
CACNA2D4
NOL12
ANXA2R
VPS26A
CSNK1G2
SSBP1
WDR11
MRPL40
HIRA
SNRPB
CARD8
NR3C1
KLHL6
BRF2
CLEC11A
ALG10B
PTPRG
STX18
FAM228B
SF3B6
INTS4
ZNF787
BTBD1
BHLHE40
UNC5B
PEAK3
BEST1
AVIL
SMG7
LARP1
TANK
CABP1
ZMPSTE24
TRABD
ETV6
RAC2
RGS14
APBB1IP
NUF2
RPS7
MDM4
ARHGEF18
STING1
CTSG
MS4A7
RAB44
MTRNR2L8
DR1
ANKRD40
MALT1
SCRIB
KLHL20
TBC1D13
HEXB
MZF1
CASP8
RASGRP4
POLDIP3
SLC44A1
SDHAF3
TSC22D4
ZBTB45
DSCC1
PPIL3
NIF3L1
SLC22A4
MMRN1
TDP2
ACOT13
WT1
EIF3F
VPS13B
ITGB3BP
EFCAB7
PTPN7
ANPEP
SH3TC1
UTP3
ARHGAP28
RNF166
FCGRT
GP6
CSRNP1
ZNF385A
RGS18
POTEH
C12orf71
RAB11FIP1
MICAL1
PROSER1
NHLRC3
GPSM3
TRPM2
CCL4
WNT16
MAP7D2
SF3A3
PARP2
PRKAG1
TBPL1
RNGTT
MTF2
GTF2H3
EIF2B1
SLC1A5
FLOT1
CCM2
ZNF655
CCDC77
KDM5A
INTS1
CD300A
C1RL
IRAG2
TIMM23
GNGT2
ABI3
GNG2
SNU13
RGL2
MYO15B
MLKL
ZNF33A
NMNAT1
LZIC
SNRNP200
SAMD10
LGALS12
SIGLEC6
CD244
GIMAP6
REXO4
PRRG2
NOSIP
RMDN1
DEF6
PHF19
TOR4A
LAMP1
ZNF565
FSCN3
CPA3
MRPS18C
HELQ
BAG6
ARRB1
NLRP12
SIGIRR
ARHGAP27
LAX1
TGIF1
POLI
ST3GAL5
S1PR4
CMTM3
RASGRF2
ITPKB
ARL6IP4
MED14
AGTPBP1
ITGAM
PHB2
PPP1R11
FBN2
IL10RB
SH3TC2
IGFBP7
FBXW4
ZNF581
P2RY14
PLSCR1
MED23
SAMD3
SMIM6
WAS
DDX23
IFRD2
HEXIM2
CCNL1
KMT5B
CTNNB1
ZC3H6
FEM1A
COPS7B
EIF2D
CALR3
C19orf44
NOTCH2NLC
TBL3
TIMM21
FBXO15
BRWD1
ABCF2
UBC
MRPL21
IGHMBP2
NCBP2AS2
NCBP2
CALCOCO1
UCKL1
ATAD2
TSNAXIP1
RANBP10
PAFAH2
PPRC1
PPP5D1
CALM3
UNK
GSPT1
TMEM199
POLDIP2
POLR2J3
SOD2
NOTCH2NLA
TMEM222
WTAP
WDR53
FBXO45
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
TSN
CCDC88A
SEC13
TOMM22
SPNS1
CALM2
LRP6
MRM3
GLOD4
ZSCAN22
CYCS
ORMDL3
NOTCH2
MRTO4
EMC1
TCF3
RPL8
COPS8
TIMM22
KBTBD7
UBB
BTRC
NUP214
SMN2
SMN1
CNOT1
TMEM115
PEMT
C16orf91
DOHH
CFAP410
ST3GAL2
KMT2D
POMZP3
CHMP4B
SYMPK
SCAF1
KPNB1
CTDP1
ZNF337
BOD1
RPS3
GSTA4
AP2S1
PSMD3
IST1
AMD1
PRCC
AHCYL2
RPS20
WASHC2C
FOXA3
PNKD
AAMP
SNX17
EIF2B4
ING3
TCEA2
HTRA2
TSC1
GFI1B
PA2G4
CDKL3
HMGB1
ADPGK
CKS2
ZNF212
PHIP
CLEC16A
SMPD3
THRAP3
WASHC2A
HEXA
PEX26
NAGPA
KCTD9
CDCA2
KBTBD6
MRPL24
RPL22
ZFAND2A
TTC13
DDIT4
NUDCD1
ZCCHC4
PPP1R12B
MED15
HIKESHI
UBE2B
NOTCH2NLB
ZKSCAN2
TRIAP1
RPL18A
H2BC21
H2AC20
ZNF721
PIGG
NXF1
UBE2D3
ATP5MF-PTCD1
ATP5MF
RPS6KB2
PKM
MCM7
AP4M1
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
INVS
ERP44
CRTC2
TOB2
H2AC21
USPL1
MAD2L1BP
MICOS13
HSD11B1L
TMEM127
CIAO1
OAZ3
MRPL9
PNRC2
IPO11
KCTD5
RPIA
CDC25C
PANK4
C8orf33
GTPBP2
NPRL2
CYB561D2
ZNF444
NOP14
GRK4
WDPCP
MDH1
TMTC3
CEP290
RPS26
PPP1R12C
FAM53C
DNAJC11
TRAPPC3
GPAM
DIP2A
TNFAIP1
IFT20
RANGAP1
DUS2
DDX28
EIF4A2
PHB
ZW10
CYP51A1
BRIX1
SLC35B4
MAPKAPK5
SMG5
UBR2
MXD4
ATXN2L
C1orf159
SRSF11
MRPS15
RBM42
TMEM208
LRRC29
ZNF56
FUS
NUP153
UBQLN1
PGBD4
EMC7
CUL4A
TBRG4
KAT7
RLF
BOD1L1
HMBOX1
PSMD11
COMMD1
PINX1
MRPS35
KDM4B
MFN2
DNAJA3
UBE2Q1
SLC25A19
UBQLN4
LAMTOR2
CCT4
C19orf53
NSFL1C
ADNP
HMGCL
DPP8
DCAKD
GHITM
BANP
CCDC146
ZFYVE1
TAF5
FBXW11
GID4
ATPAF2
PBLD
HNRNPH3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TRIP12
FBXO36
DPP9
PCID2
MMACHC
CCDC163
AP2M1
RIC8B
STK25
LRRC40
SPRYD4
INTS9
SLC33A1
LUC7L
VPS37A
CNOT7
NMT1
NOC4L
DDX51
TTC33
MRPL20
UCHL5
RO60
ENDOV
DOLPP1
AHCTF1
ZNF420
CIC
ZFYVE19
DNAJC17
PIGU
HNRNPAB
ZGPAT
ARFRP1
TEPSIN
NDUFAF8
NTAN1
SP2
RPL29
RBM6
CSRNP2
SPTLC1
TCF12
COMMD9
LETM1
ZC3H10
STAU1
ACOX3
H1-4
IDH3B
DNAJB12
RCL1
SMARCAL1
ABRAXAS2
TFPT
PRPF31
MTMR2
RALBP1
BIRC5
LONP1
CATSPERD
SECISBP2
TRMT44
GFUS
UBL7
PHF13
SNAPC3
HSP90AB1
SUPV3L1
ARF4
GTF2H4
GTF2I
TSC2
NTHL1
GTF3C5
ZFPL1
CDCA5
FDPS
COQ9
CIAPIN1
DDX49
COPE
ARHGAP9
JOSD2
H2AX
COG2
HSP90B1
CTU1
ZNF749
ELOC
SNRNP70
SART1
PIK3R3
RCOR1
MRPS16
DCAF8
RPL12
LRSAM1
TRAF7
MARS1
RAB5C
TMEM59
MRPL39
BOLA1
DCAF1
WASHC5
NSMCE2
DESI2
RWDD1
PARL
NDUFV1
WAPL
CAND1
PHF12
CHCHD3
TRAK2
STRADB
B3GALNT2
IP6K2
SOX6
C11orf58
CRBN
VCPIP1
C8orf44-SGK3
COX7C
SLC24A1
INTS14
SLC7A6OS
PRMT7
CCDC59
WDR87
SIPA1L3
MCU
PNRC1
SLC3A2
PSMD2
TRMT61B
CANT1
POLG
USP48
SKIV2L
NELFE
PRKACA
PABPC1
ATF4
H4C11
METTL9
THYN1
ACAD8
PLEKHM3
BICD2
SIRT2
NFKBIB
KLLN
SMIM13
PSMD4
SSR3
H2BC18
THOC6
HCFC1R1
H3C13
MANF
FAM149B1
ECD
PTEN
UBE3B
ZNF148
TIMM13
GFM1
NDUFB5
MRPL47
CCDC90B
ZNF500
RCOR3
RPS16
VIRMA
TFRC
TARBP2
RPLP1
TMEM217
TBC1D22B
NKIRAS1
COQ7
ASXL1
TRUB1
RUVBL1
COA6
COPS7A
NOLC1
LARS1
UBA52
RFXANK
BORCS8
CMTR1
SESN1
EIF4A1
DNM1L
SERBP1
CDKN2AIPNL
HAGH
FAHD1
POLR2E
PCBP2
CFAP20
SPRED1
ZC3H3
CAPN10
RPLP0
CACTIN
HPS4
CLP1
ACTR1A
XRRA1
SPCS2
BUB3
KAT8
NDUFAB1
NLK
ATRIP
WBP2
TMEM230
BUB1B
REXO1
SF3B2
ZNF518A
PARK7
NEURL2
CTSA
SRP68
KMT2B
ZNF225
RNASEH2C
FAF1
CWC25
SLC4A2
CFL1
XPOT
RPL15
SLX1B
SLX1A
BOLA2B
BOLA2
WRNIP1
VCP
TIGD6
HMGXB3
PALB2
DCTN5
MRPS11
MRPL46