ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20230574 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◣ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CTNNB1
KMT5B
LRP6
MTF2
CLTC
LAMP1
CALM1
BRWD1
PKM
PPP5D1
CALM3
NOTCH2NLC
RCL1
MRM3
GLOD4
CCNL1
DDIT4
RASEF
KPNB1
PHIP
ATAD2
ZC3H6
TOB2
CCDC88A
NOTCH2NLA
PNRC2
SOD2
WTAP
ATP8B1
SSNA1
ANAPC2
MRPL21
IGHMBP2
KLLN
PTEN
TMEM41A
NCBP2AS2
NCBP2
STX18
FOXJ3
ATG14
NOTCH2
TRIAP1
ZFAND2A
TBL3
SLC44A2
MXD4
SPNS1
ZKSCAN2
PNRC1
TCF3
KMT2D
DDX23
CALM2
CDKL3
UBE2B
MRTO4
EMC1
DIP2A
HEXIM2
HMGCL
MOB3A
IZUMO4
HEXA
IST1
WASHC2C
PIK3R3
TMEM222
WDR53
FBXO45
COPS7B
POMZP3
TRIP12
FBXO36
CKS2
GRHL2
SRP68
MCM7
AP4M1
VPS37A
CNOT7
UBE2D3
NUP214
SPRED1
MAPKAPK5
SEC13
NAGPA
WASHC2A
EIF2D
TMEM199
POLDIP2
COPS8
NOTCH2NLB
CCDC77
KDM5A
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ADPGK
TSN
MTMR2
ADNP
NOC4L
DDX51
ZNF212
GPAM
IPO11
SRSF11
LRRC40
DOHH
ATXN2L
TOMM22
CFAP410
POLR2J3
CYP51A1
NSFL1C
DOLPP1
GTF3C5
TIMM22
GTF2H3
EIF2B1
RPS28
NDUFA7
DNAJC11
PEPD
PHAX
ZNF721
PIGG
UBQLN1
STX16
RCOR1
GRHL1
TXN2
DCP1A
CUL4A
PCID2
UBC
SNRNP70
TAF5
ARFGAP2
IP6K2
ARHGEF12
COQ7
HAGH
FAHD1
DUS2
DDX28
ZFPL1
CDCA5
ENDOV
AJUBA
NMNAT1
LZIC
PSMD3
CHCHD1
NDUFA10
PINX1
RFXANK
BORCS8
SPATC1L
MRPL58
SMAGP
C8orf33
RBM42
PRKACA
PEX3
ADAT2
HOXD8
CYCS
CLN8
CLCN7
AURKAIP1
CANT1
ZSWIM7
TTC19
SPRYD3
CRBN
DNAJA3
TAS1R1
NOL9
FUS
SMN2
SMN1
PELP1
TARBP2
MRPS15
SPTLC1
ACOX3
TRMT44
NDUFV1
ADPRS
ARF4
MRPS35
GTF3C2
GHITM
DYRK1B
MRPL39
PBLD
HNRNPH3
DCAF8
ATG7
USP30
COMMD1
CCT4
COQ9
CIAPIN1
NDUFS7
ERCC1
PHF5A
ACO2
NOL10
ECSIT
MCCC1
TRMT61B
EIF4A3
FRA10AC1
NEURL2
CTSA
NDUFS3
KBTBD4
ZC3H3
TSPYL2
FAF1
DPP8
UBN1
GLYR1
ABCF2
SMPD4
MZT2B
KAT8
CASC3
SESN3
NXF1
TSR3
GNPTG
ZNRD2
FAM207A
TUBGCP6
THOC1
ADK
SLC7A6OS
PRMT7
MANF
ATRIP
TAOK2
VPS33A
MRPL4
BRIX1
RANBP2
LTBR
TCF12
KCTD5
TOP3B
TBRG4
DNAJB12
ZER1
CENPBD1
CDK11B
TIMM21
FBXO15
AP5Z1
SUPV3L1
TMEM203
NDOR1
DIABLO
LAD1
PARL
RTF2
ZGPAT
ARFRP1
PALB2
DCTN5
TMEM217
TBC1D22B
SUMF1
PTPN4
OPA1
PMPCA
ENTR1
OAZ1
TSR1
SGSM2
MCU
DPY19L4
TOP2B
ACAD9
NABP2
SPRYD4
RERE
CTDP1
HSP90AB1
HMGB1
USPL1
NBPF1
TET3
DCAF10
NFATC4
COG2
WDR25
WARS1
SULT2B1
SHBG
FXR2
PI4K2A
CNP
MCAT
LONP1
CATSPERD
RAD23A
MIDEAS
PA2G4
MRPL37
CYB5RL
UBE3B
BRAP
ACAD10
ZBTB45
PACC1
GTF2I
WDR18
ACSL3
SKA3
MRPL57
RLF
NDUFAB1
PARPBP
NUP37
OAZ3
MRPL9
JMJD1C
PRTG
DCP1B
HPS4
SRRD
TIMM50
C5orf51
PRKCZ
MRPS11
MRPL46
DSTYK
CCDC43
FAU
SMG5
TSR2
TOP3A
SMCR8
PSMD12
MFN2
PLEKHM3
HPS5
GTF2H1
PLEKHH3
FANCD2
GCN1
PSTK
AMD1
POLR3D
EIF4A2
WASHC5
NSMCE2
WAPL
PDCD4
METTL9
TRIP4
ALG1
SRSF1
AMOTL2
RPL22
WDR43
NLK
GNB2
HNRNPAB
UQCRC1
PSPH
CCT6A
TBCB
POLR2I
TMEM128
DDX1
MARCHF8
CMTR1
DENR
LMTK2
REXO1
PSME3
ERI1
MRPS7
GGA3
VAC14
VDAC2
DDX41
GXYLT1
FAM227B
DTWD1
RAD54L2
AARS2
RPAIN
NUP88
DCAF1
CBWD2
EEF2
LTO1
GMFB
CCNL2
C19orf48
GATAD2A
PSMF1
RUVBL1
RNPS1
EEFSEC
ATP5MF-PTCD1
ATP5MF
NFKBIZ
YIPF6
H2AX
SRPRA
HNRNPL
CDK4
GARS1
YPEL2
EXOSC8
RRP7A
HSP90B1
PEX26
TNKS2
GABPB1
ANKFY1
HBS1L
MON2
MVD
ANKRD36C
TFRC
TULP3
FAM156A
FAM156B
NUP160
TNKS
CACTIN
PPIL4
MED9
MAML3
PGS1
CCT2
FAM149B1
ECD
PKN2
IARS1
ARNTL
SMIM12
USP42
TJAP1
TMEM104
NAT9
QRICH1
TTC4
ATXN2
ANAPC11
ALYREF
MICU2
RPUSD4
FAM118B
FAM133B
HAUS5
CABIN1
CBWD5
CBWD3
TMEM242
SP2
COQ10A
RAB5IF
HTRA2
FAM76B
CEP57
ZNF839
SSU72
STK19
DXO
TAF3
CFAP43
MACROD1
COA6
RPL6
PTPN11
RPAP3
CDKN2AIPNL
ZFAND5
NUP85
EXOSC3
VCPKMT
TRMU
COMMD2
PCBP2
TSEN15
OSCAR
NDUFA3
USP14
HIF1AN
HOXD9
IDI1
RPLP1
TENT5C
CHMP1B
PPT1
UNK
ZNF384
SECISBP2
MST1
EDF1
KAT5
H3-3B
RAD50
SFSWAP
TMEM9
THRAP3
XPO4
MRPL55
THUMPD1
LRRC59
SLC35B1
EIF3F
VIRMA
RBSN
DDX46
EIF1
SENP5
MYLIP
RASGEF1B
MALL
DDX19A
TCP1
MRPL18
KCTD9
CDCA2
CDK5RAP1
NAGK
ELF1
WBP4
POLG
CHUK
SARAF
SRSF5
ZCCHC4
SDHB
TWNK
MRPL43
EFTUD2
CCDC103
DBI
C2orf76
ARF3
HERPUD1
VCP
KDM4B
MKS1
MRPL20
ZNF518A
NCL
GADD45G
CCDC86
B4GALT7
MZT2A
SPOUT1
RPL13
LUC7L
IFRD2
UBB
RNASEH1
WDR6
HUS1
GEMIN7
TBCCD1
DNAJB11
PDCD6IP
C12orf73
PCCB
SH3YL1
ACP1
ZW10
EIF2B5
DNAJC9
TAX1BP3
EMC6
DUSP5
RCOR3
NUP188
DOLK
REXO4
DPP9
ATP6V0D1
TIGAR
CUTC
COX15
VAMP1
PPP1CC
TMED2
SETD1A
CEP192
ASH2L
MRPL48
FAM161B
COQ6
NABP1
SNAPC3
MEF2A
ATAD3B
MCOLN1
PPAN-P2RY11
PPAN
HGS
ARL16
CAPN10
NBN
C16orf91
HEBP2
GNE
MARK3
MTHFD2
RPS16
UBAP2
CBWD1
UBIAD1
GIPC1
ALKBH3
LRRC37A3
ATAD3A
IDH3B
SNAP47
JMJD4
DRG2
TRA2B
SLC35F5
CRYBG2
RNASEH2C
IL4I1
NUP62
ATF5
ASNS
C5orf15
MRPL12
MED4
WFDC3
DNTTIP1
UCP2
SURF6
POLE3
C9orf43
LANCL2
UHMK1
TAF1B
CACUL1
EIF5
DHDDS
EEF1AKMT2
GMPPB
WDHD1
SOCS4
EXT1
PPIA
ATP5MPL
RAB4B
ZDHHC16
EXOSC1
XPNPEP3
ST13
ID1
MYH7B
GSS
SLC25A38
AFTPH
YEATS4
KANSL2
KDM3B
SART1
CRCP
ULK2
XBP1
ZC3H10
SNAPC5
RAD9A
HEMK1
ING5
POR
ASH1L
PSMC5
FTSJ3
ZSCAN22
NRL
DCAF11
PSMD8
BRMS1
ZCCHC3
RANBP3
ZNF740
CSAD
RCE1
ZNF8
SEC11A
ANKRD36
RBM18
MRRF
ATP9B
UMPS
KCTD11
PGBD4
EMC7
ASB6
AMDHD2
CCDC130
ZDHHC5
CAND1
SDE2
RARS2
ORC3
TIMM44
FLVCR1
H2BC21
H2AC20
H2AC21
SKIV2L
NELFE
WSB1
CPSF1
TUSC2
LRRC57
HAUS2
TMSB10
CS
STOML2
ZNF292
SUGP1
MAU2
RFX3
DPH7
GID4
ATPAF2
INO80
TMEM127
CIAO1
MIS12
DERL2
DGLUCY
RPS6KA5
SOX12
U2AF1L5
U2AF1
ANXA7
BLOC1S1
GSTO2
RWDD1
TFB2M
CNST
MIS18A
MSTO1
DCPS
LLGL2
EXO5
CBWD6
FBXW2
ETNK1
ZNF594
KPTN
VCL
NUS1
PFKM
SENP1
UBE2V2
MAF1
GTF2H2C_2
GTF2H2
EXOC2
MAN2C1
MPHOSPH10
MCEE
ZBTB9
RSRC1
SMARCA5
ARAP2
TTC8
TIMM17A
KMT2A
SC5D
SLC35A3
SLC25A37
TIGD6
HMGXB3
TBC1D22A
SEC31A
MAN1A2
SMIM13
TMPO
SLC25A26
CDKN2D
SLC24A1
INTS14
LRRC47
ATG101
LDHA
SLC39A7
RXRB
ZNF574
EMC8
COX4I1
NOP2
KDM4A
RMND5A
RNF103-CHMP3
TAGLN2
RPS6KB2
APTX
DNAJA1
ATP6V1C1
NEK2
TEPSIN
NDUFAF8
FASTK
MIGA2
TMEM116
ERP29
FAM204A
PNPT1
GOSR2
SRP9
ZFAND4
C16orf70
STARD3
TRUB1
DPH1
ALDH3A2
RNF166
CTU2
LZTR1
ID2
SNRNP200
MOB4
ZC3H15
TRDMT1
MDN1
FDFT1
ABAT
CDK11A
C18orf32
BOD1L1
GPN2
PCNA
SCN11A
WDR48
USP20
C9orf78
CZIB
UBE2S
CHSY1
IGSF9
PET117
KAT14
RPS15
SUMO2
MDM2
TSPAN10
NPLOC4
SYCE2
DGCR8
YWHAQ
VPS53
UGGT1
FAM160A2
EPRS1
PDRG1
CIC
EDC4
PPP4R3A
C2orf69
TAF6
CNPY4
RPL3
GGCX
UBE2D2
C6orf132
STYXL1
FBXO22
MCCC2
PSMD2
WDR11
UBOX5
FASTKD5
TEFM
LSM2
TVP23B
ZNF770
GPATCH1
TEDC1
SUMF2
SCAF1
SFR1
PAK4
PTPDC1
CCDC124
TRIP11
PGAP2
NUDT15
VPS11
ASAH1
MTRR
FASTKD3
COA8
BAG5
USP15
CIAO3
RMDN3
SNF8
TFDP2
PRPF19
DNAJC25-GNG10
DNAJC25
DDX42
CCDC47
TUBGCP3
ARMH3
TMEM256
TMEM183A
SNRNP25
POLR3K
GTF2IRD2B
SDHAF2
CPSF7
CLIC4
FEM1A
PARP2
GMCL1
CNOT1
SAR1B
NOM1
NOC3L
ATF4
BRPF1
RMI1
HNRNPK
DIP2B
SLC33A1
DYNLL1
RRBP1
CIAO2B
CES2
C5orf24
ARFGEF2
SRSF6
ZBTB17
CCNT2
HERC3
PYURF
PIGY
EIF3A
TVP23C
MED23
PLK2
KLF10
BRF2
MAP2K1
EHD4
TRMT2A
RANBP1
HDAC6
MDM4
GRAMD2B
PCIF1
FEM1C
PCOTH
MIPEP
ZNF500
SF3B2
FBXL12
LRCH4
FBXO24
POLR2J
POLR2C
BUD13
LENG8
PFN2
ELF2
ARID2
C6orf226
MAK16
KRT80
DOK7
TCTE3
ERMARD
WDR61
AGPS
ETV5
ANKHD1-EIF4EBP3
ANKHD1
RABGAP1
GTF2H2C
RPSA
MLST8
NDUFS6
SQOR
NDUFA11
VMAC
TMEM254
HEATR5A