ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HHIP
CALCOCO1
UCKL1
PRCC
TCEA2
BTRC
TSNAXIP1
RANBP10
TMEM115
MMACHC
CCDC163
PKIG
AP2S1
CHMP4B
NUDCD1
IFRD2
PHF12
KBTBD7
FEM1A
CLPB
GTF2H4
SMPD3
PHB
AHCYL2
CALR
ALDH1A2
MRPL24
SCNM1
LYSMD1
GSPT1
ST3GAL2
ATP2C1
CALR3
C19orf44
BANP
WDPCP
MDH1
STAU2
KBTBD6
KANSL1
CXCR4
NPRL2
CYB561D2
HIKESHI
HMBOX1
INTS9
PI16
C1orf159
RBL1
PEMT
MICOS13
HSD11B1L
VCPIP1
C8orf44-SGK3
IQGAP2
CRTC2
BOD1
C3orf86
KMT2B
DEGS1
ZFYVE1
SLC4A2
CDK5
PPRC1
ZNF444
SHQ1
WDR74
ING3
CHCHD2
SCAF1
PNKD
AAMP
INVS
ERP44
LZTFL1
PANK4
H2AZ2
PPP1R16B
TMTC3
CEP290
PAFAH2
DCLK3
MAD2L1BP
GTPBP2
NEIL3
VPS50
HEPACAM2
DDX23
ZNF331
CD1A
TLR9
LST1
PPP1R12C
MND1
LAIR1
FXYD2
UNK
KRTAP16-1
RAB37
ABCF2
GSK3A
BNIP3L
ACTR1A
SUFU
EPHX2
ZNF225
UBR2
DSTYK
CTU1
REPIN1
AP2M1
GATB
DCAKD
NMT1
MSL2
FBXO48
APLF
FBXL19
VIPAS39
AHSA1
C12orf57
CCDC146
CCM2
GFUS
FAM222A
TIMM21
FBXO15
ZNF337
BIRC5
SLC35B4
STAU1
TLR6
ZNF821
ZNF335
LAT
CCDC114
KCTD9
CDCA2
ZNF140
LDLRAD4
WNK1
TSSC4
TNFAIP1
IFT20
HSPA13
ITGA4
MAP1LC3B2
RPGRIP1L
FTO
GZMA
PSMF1
MKRN3
PRPF40B
NTAN1
RIC8B
STK25
DFFA
POLDIP3
ELOC
TFEB
NBEAL2
PPP1R12B
TTI2
RGL4
FAM193A
TMEM101
NUF2
LARS1
TGM6
H6PD
PTK2
STAP1
FASTKD1
BICD2
SLC47A1
TFPT
PRPF31
ARHGEF3
ZFYVE19
DNAJC17
MRPL1
NME1-NME2
NME1
UBQLN4
LAMTOR2
FBXW11
THYN1
ACAD8
CAPN15
CCP110
SYMPK
FOXA3
JOSD2
N4BP2L2
ZBTB45
PLK1
RPL29
ZNF500
DHX33
HECTD1
TNFRSF4
BORCS7
RPIA
DTHD1
ARHGAP24
ZGPAT
ARFRP1
PHF13
DUS3L
PEX26
SSBP1
CCNG2
CCAR2
ZNF133
DESI2
RPS26
RFX8
MX2
UTP3
NET1
TMC8
ZNF354A
NCLN
MED23
FAM185A
WDR87
SIPA1L3
ATAD2
EPHA1
SOX6
C11orf58
FAM168A
RANGAP1
ZNF56
SNX17
EIF2B4
ZNF165
NUCB2
FBXO46
DBNDD1
ICAM2
PRRG2
NOSIP
RNASEH2C
CDK8
OR10T2
MBNL1
MAMSTR
TMEM258
FEN1
ZNF354B
TES
DNAJB4
CCDC90B
DYNC1I2
SIRT4
COPS4
MFAP4
MEN1
IPO4
SLC33A1
LYST
COX7C
FAM228B
SF3B6
ATXN7
RTTN
MED15
TMEM245
ZNF605
BRF2
CHCHD3
RALGAPA2
ORMDL3
ZNF226
DLC1
NSFL1C
ADORA2A
EIF3F
ZFYVE28
CFAP99
RETNLB
FIGNL2
LCK
STX18
WBP2
TTC13
TRAPPC3
RAB1A
NUDT13
CDK5RAP1
TRAF3IP3
CLIC1
CLEC16A
WDR24
SMO
ZNF749
DCP1A
TTC33
TMEM59
BUB1B
SVIP
USP48
CIAO2A
C19orf53
TAF3
ZNF408
ARHGAP1
TSC1
GFI1B
AURKAIP1
TRAT1
ZSCAN22
GALK2
COPS2
UBC
SELENOH
AAR2
TRIP4
SNRPD3
GUCD1
PANK3
RTEL1
ASNS
NDUFB3
FAM126B
RABAC1
TLE4
GSTA4
SNRPB
TCF3
CFAP20
AQP3
TBC1D31
CCNI
TUT1
IDNK
MYO1G
PIGU
SMARCAL1
SF3A3
MRPS18C
HELQ
ASXL1
TMEM102
TOR1AIP1
GPANK1
CSNK2B
CALM2
MCM7
AP4M1
MAF1
NUTF2
CENPT
YIPF2
TIMM29
USP30
TNPO3
TRAF7
RPL18A
KAT7
KCTD5
ATP2A3
PSMD11
HDAC9
MTF2
PEX3
ADAT2
SCRIB
MTMR9
ZNF101
RACGAP1
ZNF354C
ZMAT5
UQCR10
HEXIM1
ZW10
CLDND1
ARHGDIB
PPIP5K2
GIN1
COX16
TMEM127
CIAO1
CHRNA3
GPKOW
SLC26A11
SGSH
UBAC1
ZNF169
ETFDH
C4orf46
KRR1
C16orf91
GTPBP3
SUGP1
MAU2
GRHL3
GRAP2
HEXIM2
NDUFS3
KBTBD4
RBM6
SIRT2
NFKBIB
TMEM229B
TMEM160
ADARB1
THRAP3
AQR
NOP14
GRK4
RBBP5
LAX1
ZSWIM8
PTCRA
ZNF224
PEAK1
HMG20A
PHF23
ANTKMT
ARHGAP4
RPS7
SSH2
SMARCA2
SLA
RPS20
ZNF527
ABCB8
DOCK10
NSA2
GFM2
VKORC1
FDPS
REXO4
ZNF235
CCDC150
ALG10
MED18
OR10P1
TACO1
YJU2
HEMGN
MRPL44
ARMH3
BUB3
CTHRC1
ATP5F1D
ESCO2
PRDM1
MYLK4
SLC32A1
GTSE1
CD28
RBM28
ANKRD40
SMG8
WBP1L
ZNF343
METTL11B
ZNF26
CD3E
DIABLO
WDR46
PFDN6
MTBP
MRPL13
VPREB1
PA2G4
OSCAR
NDUFA3
UBE3B
H4C3
AOAH
TRAK2
STRADB
PPP2R5B
ARHGAP9
MARS1
NUCB1
FAM8A1
UMODL1
SNAPC3
MRPS31
CASS4
MTRF1
CFAP410
SERPINI1
PDCD10
ZSWIM9
LIG1
NOP16
HIGD2A
DEF6
RPL23A
RPP40
VRK1
MAP3K7CL
PPP5D1
CALM3
SOD2
WTAP
SDCCAG8
CEP170
AHCY
PLAAT5
MRPS16
RPS13
TOMM40
KIF20A
BRD8
RUFY3
CUEDC1
PTPN22
TMEM222
SLC25A19
CIC
TOE1
MUTYH
DHX8
CCDC88A
TUBGCP3
UTRN
INTS12
GSTCD
FAM163B
RUVBL1
SDE2
KRI1
BPI
TCF7
TMEM123
UHRF2
NIBAN3
TARBP2
C12orf73
TBX6
GOLGA3
NEDD8-MDP1
NEDD8
GMPR2
ALKBH3
AGK
NFKBIZ
DGAT1
KDM3A
PPFIBP2
WRNIP1
SIRT6
ANKRD24
GPR137
ZSCAN5A
ASAP1
SERBP1
LIN37
STARD10
GTF2H2C_2
GTF2H2C
GINS3
KLHL20
CFL1
ASIP
NDUFS7
PUS10
PEX13
APOBR
SLC7A8
PIK3CG
FNDC11
PCM1
MEF2C
CASP8
NKD1
SCN3A
CHMP7
CNPY2
SEL1L
CTDP1
C17orf75
RAB30
UBE2V1
ARHGAP45
PABPC1
C12orf43
METTL26
HBP1
PRKCI
NRDE2
ATP5MF-PTCD1
ATP5MF
MAX
EMSY
CD3D
SYNGR4
DNAJC2
ADGRE2
CNOT4
LSG1
FTL
OSBPL8
MTA3
EPSTI1
NEIL2
STING1
CLTC
NUP153
NR1H3
ACP2
CTF1
FCSK
CYP2U1
TRAF3IP2
RPL22
INO80B
FKBP5
VPS52
RPS18
TSC22D4
TMEM199
POLDIP2
SIGLECL1
BOLA1
SLC24A1
INTS14
ALG10B
EIF1AD
BANF1
OR1F1
TMEM41A
TMEM208
LRRC29
ZNF227
ARMC1
ZNF850
S100A5
SLC39A3
ZC3HC1
RNF220
VPS41
ZCCHC8
DUSP2
SLC39A8
DDX49
COPE
GABPB2
MRPL3
BRWD1
EIF4A2
GTF2H2
SPC25
SDHAF3
ADO
RPS3
ING4
H4C8
TSC2
NTHL1
RAB5C
ZMPSTE24
SREK1IP1
CWC27
NELFB
ATP5PO
UGT1A5
HSPH1
IL10RA
PALD1
SNX16
ARHGEF18
CHML
CALM1
STOML2
EIF5B
TXNDC9
HMGB2
NUMA1
LRTOMT
RAB29
SOAT2
CTNNB1
COPS7B
PDE6D
MRPL48
SPAG8
DPY19L4
ITGAL
MB
PTPRCAP
CSTF2T
ITK
ZFPL1
CDCA5
GTF3C5
OR4K15
AKIRIN2
ZNF548
ZWILCH
RPL4
TTC4
RASAL3
RPL27
ZNF652
STYK1
UBB
LETM1
AP1G1
KIF15
KIAA1143
C16orf54
ZNF189
MRPL50
PEX12
FAM207A
TRUB2
COQ4
HDAC7
GCSAML
IPPK
ZNF570
ZNF569
FBXO25
ARHGAP30
BMS1
RPS3A
DMAP1
IFT74
SF3B5
PLAA
PES1
KCNN3
PSD4
JRK
BUB1
GPR171
NMNAT1
LZIC
FRA10AC1
CLP1
MTR
TAB2
FIS1
ZNF350
ZNF184
MDC1
ZNF277
DOCK4
EXO1
PSMB6
ESPL1
ZKSCAN2
UBL7
ZNF628
LRRC1
PRSS23
TOP3B
THEMIS
CNIH4
HHEX
TOR2A
INTS4
MLEC
AMD1
DERL1
CDK19
ZSCAN20
H2AX
NUP54
BRMS1L
ZNF584
RALBP1
CDK5RAP2
RPL37
ZNF230
TNFAIP8L2
MED24
TOX
HEMK1
SMUG1
SLFN12L
TNFSF4
NOLC1
SGSM3
ABLIM2
CLDN12
ZNF420
PRAF2
MAD2L2
LRP6
ERAL1
MRPL58
LMNB2
CCDC174
PROSER1
NHLRC3
MC1R
ZNF805
RPLP2
PLCXD2
OGG1
ZCCHC4
ARL17B
ARL17A
ANAPC5
APBB1IP
GAS7
SEC11C
MRPS23
CDC14B
ZNF554
PSMC3
WASF1
CDC40
NR1H2
ARHGAP15
THOC6
HCFC1R1
SCAND1
PRPF4
CDC26
CKAP2L
H4C12
TMEM129
TACC3
VGLL4
VAV1
TATDN3
NSL1
PIGL
PBXIP1
PSMD3
MDM4
ZNF45
ZC3H6
SEC13
GNB2
SLC35E2B
KCNA2
IPO7
CWC22
HNRNPA1L2
DIPK1A
SLC3A2
SNRPC
MGRN1
HSCB
CHEK2
ZSCAN23
TBL3
RFXANK
BORCS8
ZNF773
SRRT
ZBED4
RCOR1
PHB2
TTC26
TMEM43
CHCHD4
C6orf89
GBA
MRPL54
APBA3
SH2D6
CPSF1
GEMIN6
VPS25
RAB27B
NOTCH2NLC
METTL9
NDUFAF1
INTS5
TOGARAM1
KLHL28
ACSL6
C2
ABLIM1
EHMT2
ZNF688
SESN1
CEP57L1
MITD1
ZNF473
VRK3
UTP11
LTA4H
H4C4
DNAAF2
METTL7A
GTF3C3
QTRT2
CCDC191
SNIP1
LUC7L
CSRNP2
CAPN10
TMEM186
PMM2
SEPTIN9
ACBD6
SEC22B
ZAP70
AHCTF1
DFFB
CEP104
SSR3
RNF125
S100Z
KMT5B
KMT2D
IGF1
EIF2D
COMMD9
PARP2
PPP1CC
NOTCH2NLA
SMG5
PNPLA6
SLC25A51
FRG1
SUPT7L
SLC4A1AP
ZNF407
HSD11B1
NPY
ZNF384
SNAP47
JMJD4
TERF2
ANKRD17
TMBIM4
PPIL3
NIF3L1
CD2AP
COMMD2
ARHGAP19
JMJD1C
MYL6B
ZNF37A
TPX2
MRTO4
EMC1
SART1
ZBTB4
POLR2A
NDUFA2
IK
ELP6
TRMT1L
SWT1
VPS13B
CST7
H4C15
H4C14
GALE
DPEP2
C15orf62
MIS18A
LTN1
MOB3A
IZUMO4
SMN2
SMN1
ENOX2
SLC35A3
RFX7
WDR11
SLC44A1
SLX4IP
WDR83
WDR83OS
MFSD3
PANX3
CDH17
PUM3
DDX1
ZNF862
PTRHD1
CENPO
EVI5L
SLC35A1
CSDE1
PIH1D2
NKAPD1
ZNF785
SPHK2
HIRIP3
RPL18
RAD52
CD48
PPIL2
TM9SF4
FOXP1
ZNF32
ITPR1
MRPL21
IGHMBP2
TMED9
MRPL16
KBTBD8
POGZ