ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023330 | T-47D
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◣ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

SPATC1L
FBH1
ANKRD16
HIBADH
SP2
PKNOX1
ACAP2
SESN1
RFX1
RAB5B
KDM4B
DNM2
NLK
MAF1
ZSWIM3
ACOT8
FLAD1
G3BP1
GTPBP6
CYTH2
KAT6B
SP1
TMEM60
PHTF2
ZNF687
ZNF595
FRMD5
MRTFA
ANKHD1-EIF4EBP3
ANKHD1
ZNF718
LYNX1-SLURP2
LYNX1
STT3A
CBX5
HNRNPA1
PLAG1
CHCHD7
UBE2J2
DCAF7
ATP5F1B
JUP
ACTR1A
RBM27
TRAF2
HIP1
ZNF141
CGGBP1
ZNF654
AK2
RHPN1
CIC
OSBP
GATAD2A
EVI5L
SLC25A25
NAIF1
PANK2
OSBPL2
LRCH4
FBXO24
H2AZ2
ZMYM5
OGDH
DCTN4
RAB40C
PPIA
AKTIP
ATG9A
ANKZF1
HTT
NFE2L1
ABHD2
TUBB4B
TMEM45A
PWWP2A
NFATC2IP
ETV5
EIF4A1
HSPA2
FKBP5
RPLP0
PABPN1
KHSRP
RAB11B
CTTNBP2NL
ENSA
MSANTD4
BCL2L1
STK17A
PXMP4
SAP30L
NCOA2
CHD6
MAP3K3
HBP1
ELMO2
ZNF564
C7orf50
GDI2
TMEM160
MED30
PRRC2B
STIP1
TOM1L2
DRC3
SLC26A2
CEP131
FAM126A
PRC1
MPZL1
TCERG1
WFS1
XPO1
NUMB
MEAK7
GATAD2B
EPHA7
TDRKH
SFXN5
CENPA
TMEM218
MYH10
RNF34
FRYL
TNIP1
IER5L
HNRNPC
FANCF
SCAI
ZMYM2
PODNL1
DCAF15
HLTF
MTMR12
MLLT1
RRBP1
TOP2A
TRAFD1
SPRYD3
TXNDC16
GPR137C
DNAJC14
KIF1B
FMNL3
RPL36AL
MGAT2
EIF2AK3
TEPSIN
NDUFAF8
CYB5A
RAB3A
ZSWIM1
ZNF492
MACROD2
GTPBP1
ERCC2
HNRNPL
PHF20
YPEL2
RAB5C
TP53BP1
UGP2
IGSF8
SIPA1L2
ZSWIM4
DCUN1D4
PLCL1
IP6K1
TCF3
PNN
PRDM11
MEF2D
KMT5C
SFXN3
PDZD7
CANX
EPHB3
BCAS3
TRIM9
CCDC61
JPT1
ORC2
TRIM32
ASTN2
IRS2
PCF11
DNAJB5
PTK2B
TRIM35
CCDC137
ERI3
FOXK2
EHBP1
KCTD7
CNNM2
ENPP5
PGAP2
RPN2
MROH8
CBLB
TBC1D10B
MYLPF
TAF7
CRLF3
DAZAP2
ATF7-NPFF
ATF7
EFNB2
MYH9
MXD4
SEPTIN9
CEBPG
SYPL1
ZSCAN32
ZNF174
SEPHS2
ACTR2
UBP1
SLC25A42
KIAA0232
KLF5
ZNF281
RAB40B
CDR2
ARAF
ZNF691
TLE1
ARL4A
RPUSD3
MAML1
OTULINL
PMS1
ORMDL1
MTRNR2L8
NR3C2
TSACC
CCT3
GLRX5
POLR3A
EEA1
OSBPL3
HDGFL2
ZRANB3
R3HDM1
KIAA0513
PBX1
SP4
HESX1
APPL1
HNRNPR
GLCCI1
ALKBH5
PODXL2
GNAZ
SPSB3
HGH1
GOLIM4
MRPL37
CYB5RL
PDXP
IVD
MPHOSPH8
PPP2R5A
MEGF9
KMT5A
SLC41A1
C12orf65
DIAPH3
PLIN3
MAST4
FAM222B
CAMTA1
SLC46A3
SMAD2
ENO1
KCTD9
CDCA2
ASPH
CDH15
PPFIBP1
AGPAT1
RNF5
ENTPD7
ZCCHC14
AKAP8
TSPAN15
UVRAG
MPRIP
NR2C2
MYH14
BAIAP2
MACO1
BPGM
ZNF555
MIEF2
KANSL1
FZD4
TOP2B
GET4
PPM1K
NXT1
FAM72C
JAKMIP1
ZC3H6
NCK1
TRAPPC11
RWDD4
GBF1
LLGL1
RMI1
HNRNPK
TPCN1
IQCD
DCAF4
RPUSD1
CHTF18
SP3
RAPGEF2
TTBK2
NIPAL3
STPG1
VIPR1
RUVBL1
RAB39A
IFT27
RPS11
RSBN1L
GATM
SPATA5L1
MAFA
AMD1
ERAP1
TRAF7
TMCC2
HOOK1
ITFG2
EIF5
RAB8A
HRAS
NUFIP2
PRMT1
ROGDI
OTX1
FOXO1
PEF1
ZFYVE21
XRCC3
NUBP1
PCNX3
HNRNPAB
PAX9
SHKBP1
WBP1L
PC
MLH1
EPM2AIP1
IVNS1ABP
SSBP2
INTS3
HACL1
BTD
JPT2
RTRAF
DDX19B
AARS1
SRGAP2
FAM72A
NXPE3
GOLPH3L
ZBTB7A
NAXD
GPR108
WBP1
FOXN3
ANKRD54
HEY1
BBX
SRGAP2B
FAM72D
ME2
N6AMT1
MDC1
GRK6
PLEKHH2
SARNP
ORMDL2
CCNG1
PIM1
GRSF1
ORAI3
HDAC4
MARCHF3
CIT
HSPA5
ARRDC3
SLC25A19
ANP32E
PPM1B
SPAG7
LIX1L
ADRM1
YWHAZ
PDPK1
ZNF774
STARD3NL
KDM6A
KBTBD3
AASDHPPT
PPP3CA
COPS7B
PDE6D
ANP32A
ZNF626
FYN
RGS9BP
ANKRD27
KSR2
SMARCD2
CFAP410
TIAM1
LOC150051
C16orf72
USP20
C9orf78
KAT7
OTUD5
SRP19
ACTN1
CREB3L2
ALKBH7
OPA3
TDP1
PSKH1
EFCAB11
ZNF443
ZNF724
AP2A1
CCDC153
TANGO2
TSEN54
CASKIN2
ARVCF
IL6ST
GNA12
STX5
DNAJC27
ZNF200
CHCHD2
SDC2
IGSF9B
CREBRF
MIA3
INIP
PADI2
COQ7
DAPK3
SLC39A1
PTPN13
ACYP1
PRKD2
GPR158
SUFU
LMAN2
LMTK2
ATP7B
ALG11
ESR2
MTOR
C22orf39
TOMM40L
ZNF563
IRX2
C5orf38
RGMB
AKAP5
FMN1
SLC25A28
BAZ1B
MROH1
CCNL2
GAS2L3
CNOT3
PDP2
PROSER3
HSPB6
GLCE
TOM1
SELENOO
SBDS
TYW1
TMEM53
ARMH1
AKAP13
GALNT18
F11R
ZDHHC24
ACTN3
FAM111B
GRPEL1
LINC02210-CRHR1
TNRC18
ACTR1B
OXSR1
VPS35
MAPK9
ATP5F1E
ING1
UBTD1
MMS19
DPP3
NF2
FHIT
PLCG1
CREB3L4
RNF20
DYNLRB1
PNKD
AAMP
EIF4A2
AZIN1
RALGPS1
TMTC4
SRGAP1
NBR1
ZNF211
RSPH4A
TNRC6B
XAB2
KCNAB2
ATP6AP1
ZNF367
LIN37
ZNF493
UBFD1
EARS2
PDIA6
MBIP
ITSN1
CRYZL1
ABCA7
CAND1
STAT3
CCDC102A
PER2
PGK1
SORT1
SLC39A3
HMGN1
MAPK8IP3
SPC24
GFPT1
RFX2
DRAP1
C11orf68
PRKACA
RTTN
SLF2
DHCR7
COPG2
FAM228B
PFN4
SLC4A7
DUSP10
YJU2
RBM4
LTN1
LCORL
FICD
ARL17B
ARL17A
PCYOX1L
FGFR3
FKBP3
PCP4L1
INPP5B
CYC1
DPY19L3
SUN2
OTUB2
ZNRF2
PACSIN2
CREB3L3
CHD8
POLD2
MRPL34
ABHD8
SCAMP2
ZBTB18
NFIL3
BBS12
RBM15
BBS10
ZBTB25
ZBTB1
DMBX1
CDC25C
FAM53C
DDX11
ZNF77
GNA11
KMT5B
ZBTB20
ANAPC15
FKBP8
SUZ12
MED7
DNAL4
USP16
SMARCA2
ZNF823
BAHCC1
LETM2
AP5Z1
KLHL25
MAF
CHPF2
PGD
PPP6R3
NGDN
NEMP1
HNRNPLL
TBC1D10A
GLIS1
SLC15A4
FAM174C
TRIM45
RRAGC
BUB3
STARD5
HDAC11
NOVA1
COPZ1
ZNF341
MAFB
ID2
AMER1
YIF1A
PRKCI
KMT2A
LAMTOR4
PRDM15
TEN1
ACOX1
ZNF441
CNTN1
RPL18A
MCM3
STX7
H2AJ
MEX3C
RAB22A
HERC3
PTDSS1
MTERF3
SWSAP1
MAGI1
ZNF91
BAMBI
IL10RA
ZNF418
HS3ST3B1
MCM7
AP4M1
MCU
DGCR8
HEXIM2
ZNF143
ZNF775
JARID2
WDR81
TMEM161A
RNF187
ZNF44
PER3
TMEM41A
MEA1
KLHDC3
ZBED5
SSBP3
STK11
DLGAP5
GALNT2
SAMD4B
ATP6AP2
INAFM2
FOXK1
SIX2
UBE2C
INPP5A
SNX18
ZNF440
SLFN5
MTHFD1
MARCHF2
KDM4A
EIF1
ZNF436
FAM76B
CEP57
SMDT1
MON1B
CCT7
PRADC1
TPRG1L
KIAA0895L
ZNF727
DDX49
COPE
SFPQ
HNRNPA0
CCDC91
MAD1L1
ZNF726
C19orf48
ELAVL1
ZNF98
USP15
PCYT1A
IBA57
FUT8
STARD7
CTPS1
ZNF776
ZNF14
NOTCH2NLA
ARHGEF9
HAUS7
NRXN2
PRPF40A
ARL6IP6
RHOB
KANK3
GBA
DGLUCY
RPS6KA5
MAN1A1
LMO4
TYW1B
LRP10
EIF2B3
KANSL2
ZNF92
GALNT10
SNX25
BNIP3L
TSPAN31
CBX8
NUF2
CNTRL
ISOC2
PAFAH1B2
HEATR5A
ITGB1BP1
CPSF3
PRDM9
OPA1
INTS10
GNAL
KCTD2
ATP5PD
ZNF66
ECHDC3
GLRA3
ETFBKMT
USF3
FAM117A
LANCL2
INTS4
MAP2K3
LSM4
NSMCE1
VEZT
FGD6
TTLL5
ERG28
RFWD3
RCOR1
HINFP
DDX59
BICRA
ZNF875
GTF2A2
PSMD3
NBPF1
EPB41
ZIC3
SHPK
CTNS
ERV3-1-ZNF117
ERV3-1
GNL3L
YARS1
S100PBP
YBX1
PJA2
FAM161A
CDC73
CERS6
MZF1
CHD2
ZNF17
LUC7L2
E4F1
PMF1-BGLAP
PMF1
SUOX
CAPSL
KDSR
PEX2
USP3
ZNF101
NOTCH2
ZER1
TCP1
MRPL18
ZNF491
RNF139
CDCA7L
SNX15
LAPTM4A
MTRES1
BCDIN3D
ANKRD18B
RFX3
KAT6A
TMEM9
MTFR1
CDON
TCTEX1D2
ZNF799
SPRYD7
NKX3-2
NOTCH2NLB
TM2D2
ADAM9
CEP152
DNAJB1
SLC35E2A
TECR
NDUFA12
LRCH3
NUDT4B
SPDYE14
SPDYE10P
TMEM170A
WBP11
C12orf60
UPRT
RNF13
UAP1
SRGAP2C
FAM72B
MED13L
PAF1
ZBTB3
GFM1
COPS3
DROSHA
C5orf22
BRPF3
ZNF709
HSP90AB1
PSMD9
HPD
IQCH
AAGAB
DERL1
PLAAT1
RUVBL2
GYS1
ARHGAP39
SELENOI
ADGRF3
MRPS23
ASF1B
CASTOR2
RIPK2
GLS
PPM1L
UGCG
RBMX
NCBP2AS2
NCBP2
TOR1AIP1
FAM227B
DTWD1
EPHA4
ANO10
CSTF2T
NEBL
RBX1
ERCC1
GUK1
SAV1
ARHGEF10
ZNF732
BMS1
ARL14EP
GMNC
HYAL2
PKNOX2
FAM222A
ZNF700
ONECUT2
SLC39A13
SETD1A
RNF6
ZDHHC5
CHD1L
PRKAB2
EIF2D
NOTCH2NLC
NDST2
FAM76A
ZDHHC13
FRA10AC1
AP3S2
RPL37
BRMS1L
HECTD1
PIGX
CEP19
DLL4
SIN3A
PAK2
CIZ1
PEX5L
VAT1L
RTN4
INCENP
CHAF1A
TST
MPST
DVL3
DSTYK
AFF1
LIG4
ABHD13
SS18L1
PSMA7
LMBR1L
DTX4
UCHL5
RO60
HMGCS1
KRR1
FUT10
NBN
ZNF669
SURF4
PAG1
IQCG
LMLN
L2HGDH
DMAC2L
NMT2
CDK16
CTNNB1
TSPAN4
POLR2L
GNB4
COL5A1
TMEM30B
SLC33A1
OS9
USP30
DPY19L4
USP14
WWOX
ATP2B1
SKA2
PRR11
MBOAT2
S100A16
RBBP5
GPR137
IDI1
MIGA2
ZFP91
LPXN
DNAH14
BAD
CBWD5
POR
CBWD3
CBWD6
ZNF639
TEX2
TACO1
GRAMD2B
AP3M2
GCDH
YEATS2
PXMP2
POLE
DCUN1D1
SPPL3
SSH1
CKMT1A