ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
CCAR2
SCNM1
LYSMD1
GRPEL2
ITGB2
ZFP69B
SH3BP2
RPS19
LAMP1
ALOX5AP
NLRP12
SPATC1
NFYC
CAB39
NCF1
PGK1
LGALS8
RXRA
FCER1G
PGA4
PGA3
PNP
WDFY3
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
SETDB1
YES1
PPT1
HBS1L
MTPN
LUZP6
CD244
FAF1
RNF149
URM1
VPS33B
PGA5
STEAP4
ATP5MPL
SNRNP200
SMAP2
PPP1R12C
TLE4
XRCC5
ARHGAP30
MFSD2A
TIGD4
ARFIP1
STK36
RNF25
ARHGEF12
MEFV
MMACHC
CCDC163
POMP
VCPIP1
C8orf44-SGK3
RUBCNL
MDM4
FOXJ3
MRPS18C
HELQ
EXOSC3
TRIT1
APPL2
CEACAM21
NUF2
ITGAM
TMEM30A
IPCEF1
FEM1A
VTA1
NMBR
SREK1IP1
CWC27
CLIC5
PISD
SASS6
TTC14
PPIH
ABT1
RASA1
MRPL24
SP110
C4orf3
CARD8
MIA3
GOLGA7
MED23
ADPRS
HAUS6
NIBAN3
KIFAP3
SELENOH
MED18
MED10
IL16
OAS3
OAS2
MTRNR2L8
TEP1
ZNF780A
RNPEP
CD1A
PDCD2
NIP7
COG8
UBXN8
MTRNR2L2
UGGT1
OTUD7B
DOCK8
ARPC2
TNFAIP8L2
FAM207A
C22orf34
PIKFYVE
UBL7
TSSC4
USF1
TCF12
UTP3
NUTM1
NOP10
KBTBD7
UBR7
GON7
B3GALNT2
EPRS1
ZNF56
GTPBP10
BRIX1
UCHL5
RO60
CD53
UCKL1
SCAF11
NCSTN
COPA
INPP4B
TLR4
RPL37A
SIGLEC11
SDCCAG8
CEP170
ELOF1
CHMP4B
PIGM
IFNGR1
HIBCH
TMEM154
TFB2M
CNST
CCDC149
C6orf89
RMND1
ARMT1
DBI
C2orf76
IFRD2
STK4
NECAP2
IL1RN
PGBD4
EMC7
TCTE3
ERMARD
UBAP1
EIF2D
KBTBD6
METTL18
C1orf112
ZNF622
FAM227B
DTWD1
RPL37
HIGD2B
BBS4
PA2G4
ARPC3
TNFAIP1
IFT20
DCAF10
TBPL1
ZNF484
RMDN1
DENND4B
ATP2B4
CTSG
WDR70
HMBOX1
INTS9
ARHGEF1
TIPRL
ZNF410
TCTEX1D1
ALDOA
TRIAP1
RGL1
ARPC5
NR3C1
DISC1
SNAPC3
CHCHD5
PDLIM2
SIGLEC16
THYN1
ACAD8
MTMR14
TPRKB
XRN2
NDFIP2
EXOSC4
FBXO38
LILRA2
NUDCD1
APOL6
NOTCH2NLC
IPP
TMEM59
CMTR1
HK3
NOL11
TAF11
ANKS1A
SDHAF3
CFAP298-TCP10L
CFAP298
SKP2
LMBRD2
ADAM10
HMGB1
USPL1
GALK2
COPS2
ZNF226
TOMM20
AOPEP
HARS2
HARS1
LILRB4
TMEM208
LRRC29
EIF3D
ITGA4
ZNF658
STAU1
MRPS23
PDF
PRPF3
TLE1
KCTD5
MS4A3
NOTCH2
FKBP1A
FUCA1
VIRMA
SNRPC
NME7
BLZF1
EIF2B3
NSUN5
USP3
TPT1
PTK2B
TRIM35
SRSF11
LRRC40
ATG16L1
TPM3
TOR1AIP1
NCOA3
ERLIN2
RNGTT
ALG10
SDHAF2
CPSF7
E2F4
PKN2
PPP4R3A
CBWD1
ISY1-RAB43
ISY1
KIF2C
FIGNL2
IRAK1BP1
XRRA1
SPCS2
MRPL3
TBRG4
PRRG2
NOSIP
MRPL10
LRRC46
CUL7
TATDN1
NDUFB9
THOC5
DPY19L3
SCAF1
WDR61
CCL22
JOSD2
TMEM33
SNX3
ZNF197
ZC3H3
KLHL20
SNAPC5
ATG5
ZNF614
FAM200B
GGPS1
ARID4B
MAGEF1
PHACTR4
PDPR
TACC1
LST1
SAMHD1
TRIP4
RTF2
GPANK1
CSNK2B
SRP9
SEC22B
BOLA1
GHRL
SNX19
TPK1
ZNF221
LYPLA2
HEATR1
PHB
TBL3
INTS12
GSTCD
MOB4
BOD1L1
NAT10
MYBL1
CCT8
CMPK2
NDUFS3
KBTBD4
TTC13
DR1
PEX12
NDUFA12
ZNF668
ZNF646
RTCA
SCML1
OSCAR
NDUFA3
GADD45B
VPS25
PTTG1IP
TOR1A
SEC31A
ZFYVE1
DDX18
LAMTOR5
MTERF1
RPS20
RAB1A
ERI1
ARID2
ASXL2
CHMP5
BAG1
P3H1
PEX3
ADAT2
TMEM43
CHCHD4
HSPA13
TBC1D8B
CAVIN2
TMEM222
NUS1
GTF2H3
EIF2B1
GTF2H2C
ZNF26
GTF2H2
ZNF224
DHDDS
CHMP7
MYL5
ATP5ME
NUP133
SLC35B4
CCDC86
SNUPN
PPIE
WASHC5
NSMCE2
PPIL4
AKR1A1
ZNF398
ZNF425
TRIP11
NCF4
MRPS35
CCNT2
CSF2RB
ATG7
MTIF2
ALG10B
WDR55
TMX3
CCDC102B
TCHP
MICOS13
HSD11B1L
DUSP6
TNFSF10
CIITA
RAB44
TMTC3
CEP290
RPAP3
MFSD4B
ZNF142
BCS1L
PPP1R8
TAF1B
UBAP2L
C1orf43
RGS18
MMUT
CENPQ
ZNF350
ARHGAP18
ORMDL3
STK25
RWDD1
SRPRA
TRAPPC8
PRKCSH
CCDC151
WNT2B
AOAH
ABCF2
ABRAXAS2
GTF2H2C_2
PSMD7
PIGF
CRIPT
UNK
TMEM127
CIAO1
VPS26C
INO80B
FPR1
SYMPK
PSMD3
FOXA3
SCAND1
GNPAT
C1orf131
TRIM25
CEACAM4
IBA57
RNF139
RPL38
PTPN4
SPG11
PPP6C
UBE4A
TNPO1
AHI1
MINDY3
TERF2
RBM45
PPME1
C2CD3
SF3B1
ZC3H13
RPIA
WIPF2
LARS2
SRFBP1
PDSS2
KIZ
RAD50
RAB27B
RPL5
CLPP
MRPS14
MLKL
GIMAP6
S100A9
MAD2L1BP
GTPBP2
NTAN1
FAM120B
TIMM10
TIMM21
FBXO15
ZNF697
CCDC30
ZMYND12
PPCS
UBLCP1
WDR7
COX7A2
SYK
NOTCH2NLA
CHMP1B
TBC1D23
MAGOH
CBWD5
LATS1
SNX17
EIF2B4
DUS3L
GET4
RPL27
ATP6V1C1
ARL4A
KPNA5
ZNF3
FRG1
OTUD6B
MS4A7
C1orf74
PARP10
TMEM115
RPS6KB2
ZNF225
CBWD3
CBWD6
THEM4
PUM1
IL10RB
PHLPP1
CYB5B
SLC24A1
INTS14
SF3B5
NUP42
TLN1
CREB3
ADAR
COX16
N4BP2L2
COX5B
DCP1A
SNAP47
JMJD4
TPR
ODR4
ETNK1
SLC30A5
CLK2
ANXA2R
PICALM
CBWD2
RANBP3
ZNF318
MDN1
SECISBP2L
SLC33A1
NKIRAS1
RPL15
NCKAP1L
ZNF337
SESN1
CEP57L1
NUP58
TMEM39B
CLASP1
PIGBOS1
PIGB
CTNNB1
PRCC
TRAK2
STRADB
C1orf109
ICAM1
AHCTF1
DCLRE1B
AP4B1
COX6A1
ETFDH
C4orf46
YTHDF2
NFKBIL1
ATP6V1G2
SUCLA2
WDR43
TOMM40
MCPH1
ZC3HAV1
RIC8B
DESI2
AP3S2
ERCC6L2
TAF12
RRS1
TSN
DMAC1
RRM1
NOXA1
TCTEX1D2
PEX19
HAX1
SDSL
ELOC
GPR137
SRSF4
AGGF1
DEFB1
GIMAP8
TADA1
DNAJC16
IL6R
DBN1
FRA10AC1
ZNF444
SLC25A32
DCAF13
RAB10
RPAP1
PAFAH2
ZW10
BOD1
TRMU
ZNF547
TRAPPC2B
THAP12
GVQW3
LOC100289561
CCT5
ATPSCKMT
UBR1
RPL29
NUTF2
CENPT
WASF1
CDC40
ZNF268
MTHFD2L
CLEC11A
BCL2A1
NMNAT1
LZIC
ZNF212
SART1
ADSS2
THAP1
ABCB10
ABHD3
CD274
SKIV2L
NELFE
LUC7L2
MRPL55
TOR1AIP2
SRBD1
NDUFAB1
MED4
MRPS31
PLPBP
ERO1B
CYP4V2
DAPP1
LILRB1
ZNF140
VKORC1
LSM2
UBR2
PHF13
ZNF148
RPS12
WDFY2
GUK1
RNF14
SGO2
RALB
ASNSD1
ASDURF
CCL4L2
OR52K1
BRF2
PPP1R15B
NFE2L2
TTLL4
TMCO1
MIER1
DNAI4
CPT2
RAB43
ADA2
PPCDC
PINX1
SLC7A6OS
PRMT7
ZNF251
DNAJC10
CRYZL2P-SEC16B
IFTAP
SOD2
WTAP
HMGCL
METTL9
CDK5RAP2
APH1A
PACC1
CITED4
SMIM20
KIFC1
CCDC15
PATL1
OR4Q2
UBE2D3
RALBP1
RNF141
GTF2E2
TBCE
LRIF1
TRPM2
IL19
IL10
SPHK2
RPL18
SLC30A6
AP2B1
KDM1A
THAP6
DEF6
CCNL1
HCK
CFAP20
ZNF235
CDC37L1
RFC2
SERPINI1
PDCD10
YARS1
S100PBP
SLC16A3
C3orf86
MEN1
IPO8
MRPL45
MTMR6
RUFY3
TRMT11
P2RY6
CCZ1B
TRAPPC4
RPS25
TBRG1
GMCL1
STXBP3
NBR1
EFHC1
SP140L
IL7R
NOTCH2NLB
ZNF749
INTS1
EEF1AKNMT
DHX8
KIAA1586
GOLGA5
SLC30A7
LAMB3
CDK4
CLN5
GPN2
PLSCR1
PRKN
PACRG
PEX2
TGDS
XPC
LSM3
FAM162A
CCDC58
RPL22
RPS7
WDR36
GAR1
NEDD9
SIGLEC6
BEST1
DSTYK
IPO11
TRA2B
SLC1A5
PGM2
TMCO6
SPRED2
ACP3
TMEM101
ZNF879
TFB1M
ENPP4
OSBPL7
PCM1
PPP4R3B
EED
RBM34
RNF216
RTN3
DHRS4
DHRS4L2
RASAL3
FCAMR
RPS3
AFTPH
SMIM14
CC2D1B
LINS1
ASB7
TRIM69
ZBTB45
NDUFV1
MVB12A
TRAPPC9
RASSF5
EIF3E
RABGGTB
PPP1R12B
SERBP1
TRIM37
OMA1
DAB1
ZNF670
ADGRL2
ANGPTL2
ST3GAL5
PALB2
DCTN5
TMEM186
PMM2
MAP2K1
FMC1-LUC7L2
FMC1
PPP4C
WDFY1
PRRC2C
ZNF706
MMADHC
G0S2
ARHGAP25
SLAMF7
PHIP
PSMF1
DGAT1
LSG1
SLC44A1
NFX1
PCYT1A
PRPF6
ZSCAN30
NAT1
PKD2L2
ATP5MF-PTCD1
ATP5MF
ZNF189
MRPL50
ZSCAN32
ZNF174
ATP6V0D1
VPS29
RAD9B
TAF13
ELMO1
AMIGO2
PGS1
ZNF230
STAM2
POLR1F
CSNK1A1
ZBTB37
UCK1
BECN1
SMIM8
LEO1
TCTN1
ABCA3
SCP2
VPS13C
ARHGEF6
OPA1
MFF
KIF15
KIAA1143
PPIL3
NIF3L1
MRPL37
CYB5RL
FAM222A
MRPL38
KLHL18
KIF9
RC3H2
IFI6
COPS8
GTF3C3
MKNK1
RPL24
DDX60L
SVOP
SP100
DDX41
SDHB
PWP1
DYNC2I1
CCDC114
RPA2
TMEM123
ACVRL1
USP15
TMEM69
CLDND1
GPBP1L1
SMAP1
BANK1
CRBN
TNKS
REXO2
EMC8
COX4I1
FAM104A
C17orf80
SELL
IL18RAP
BRAP
ACAD10
CCDC88A
RANGAP1
DCAF8
SH2B1
TUFM
YWHAB
DNAH14
CDC42
GINS4
HSD17B11
IFIT3
CEP350
SNRPE
CCDC43
RPS6
TMED5
CCDC18
CEP120
GORAB
CX3CR1
ZC3H6
API5
DMAP1
S100A13
CHTOP
GNAI2
LYNX1-SLURP2
LYNX1
NCBP2AS2
NCBP2
UBE2Q1
SYPL1
MYH7B
GSS
PSMD9
HPD
ZNF669
UTP23
CSPP1
MAPK14
PTK6
BIRC5
ZNF451
GABPA
ATP5PF
CBR4
OTUD3
RRM2B
EEF2K
SPRYD4
FBXO46
DGKZ
IFI16