ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
LAMP1
NFKB2
MEF2C
PLSCR1
XRCC5
ABT1
GNG2
GSTA4
CMPK2
CALCOCO1
TLR4
FEM1A
CALR3
C19orf44
PGK1
RPS19
SMPD3
STEAP4
PTK2
NUDCD1
PDLIM2
UBXN8
BOD1
NUTM1
NOP10
NIBAN3
H4C11
RNF149
APOL6
ZNF221
IFRD2
NEDD9
H4C12
CD1A
DOCK8
PEX12
DCAF12
GBA
NR3C1
H4C3
TMEM91
B9D2
DDX58
TMTC3
CEP290
NBN
ASGR2
SCNM1
LYSMD1
GHRL
KBTBD6
H2BU1
H2AW
CTU1
PPP1R12C
HMBOX1
INTS9
MTMR9
RPS20
CLPB
ZNF780A
MS4A3
ZFYVE1
TMEM115
ZNF444
HIKESHI
SH3BP2
MINDY3
MRPL24
FBXW4
EXD1
CHP1
DYNC2H1
TASL
TSNAXIP1
RANBP10
VCPIP1
C8orf44-SGK3
ZSCAN30
NDUFS7
NUF2
SIGLEC6
MICOS13
HSD11B1L
PANK4
CD33
EXOSC4
RAB4B
SPRED2
LTB4R
PEX3
ADAT2
RUBCNL
ST3GAL2
NBEAL2
KBTBD7
H4C15
H4C14
PAFAH2
RFX1
PROS1
ZNF225
PNKD
AAMP
MMACHC
CCDC163
H4C9
MITD1
BRF2
SLC1A5
TPRKB
BTRC
IPCEF1
MEFV
PLEKHM3
MTF2
CHMP4B
PPRC1
H2BC18
H3C13
MRPS18C
HELQ
TMEM243
DENND3
GSPT1
DDX18
BAZ1A
TYROBP
RMND1
ARMT1
CCDC152
FOLR2
TRIP4
RAB39A
INVS
ERP44
ALOX5AP
TOR1AIP1
AP2S1
CCAR2
FIGNL2
ARHGAP25
PHB
KRR1
TM6SF1
MED23
ZNF226
P2RY14
DISC1
UCKL1
NDFIP2
PEMT
CARD8
EHD1
FRG1
RMDN2
KANSL3
RAC2
NCF2
IL1RN
COPS7A
BANK1
CTTN
YES1
CCDC146
GRPEL2
ENOSF1
ARID5A
NME7
BLZF1
TAF1B
INPP5D
CCER2
ZSCAN22
POMP
ZCCHC4
STAP1
CLEC10A
ICAM1
ITGA4
PRCC
INSC
FLOT1
SIGLEC1
DCP1A
LRRC37A3
FAM227B
DTWD1
TAL1
JOSD2
WASHC4
UTP3
SMC6
GEN1
PARP10
PGBD4
EMC7
AURKAIP1
GATB
INTS12
GSTCD
NOTCH1
PRRG2
NOSIP
MTIF2
PRKCE
VAV1
GALK2
COPS2
AHCYL2
RPS7
ANKRD18B
IPPK
RIPK1
VPS26A
TBC1D19
CA13
FRA10AC1
TMEM154
TTC33
TEFM
ARPC3
GABPB2
UBR1
ASPHD2
FBXO46
USP3
CTSG
LILRA2
OBI1
RFFL
SHISA5
RAB27B
ERLIN2
SSBP2
PPP6R1
PPP1R12B
SYMPK
FOXA3
TBPL1
DPY19L4
SSBP1
SF3A3
RPL6
TMEM68
TGS1
CCDC149
VPS13B
DR1
RPL5
DDX1
ZAR1L
BRCA2
PIK3CG
LMO2
TNNI2
TSSC4
PHF12
FASTKD1
LCE3A
RBBP5
WDR74
CRTC2
PEAK3
SLC35B4
BORCS7
ZNF268
ZC3HAV1
DHX8
SLC35F5
H3C3
H1-3
RPS6KA1
SCRIB
NDUFB7
BCL2L13
MRPL42
RNPEP
SPATA24
CEACAM21
IRF9
GTF2H2C_2
FAM228B
GTF2H2C
SF3B6
BNC2
CARD19
CSF2RB
PPP1R11
RPIA
ANXA2R
FAM133B
LCMT2
ADAL
ZNF554
SECISBP2L
PTK2B
TRIM35
NSMAF
RPGRIP1L
FTO
ARHGEF18
TACC1
ALG10
GTF2H3
EIF2B1
TTC14
FAM167A
SLC24A1
INTS14
PCBP2
ZNF350
DPY19L3
RALB
SEC14L1
ZBTB45
ZNF56
PPIP5K2
GIN1
TCTEX1D1
MRPL48
ZNF224
NINJ2
CCR1
DSTYK
MRPL1
PLCXD2
ZC3HC1
CCDC88A
PARP2
USF1
TMEM242
CDK5RAP2
CCDC90B
JRK
CHCHD5
INO80D
HCK
FUT10
PSMA8
PLEKHA4
LSG1
PPM1M
SDSL
TMEM229B
TACO1
PCM1
TTI2
NUCB1
ZNF235
COMMD2
H4C4
SNX17
EIF2B4
HUS1
ADAR
PSMF1
SIRT2
NFKBIB
MRPS23
AP3S2
CCDC9
PEX2
PIGV
TSC1
GFI1B
APPL2
SMG6
CAVIN2
GFUS
ZNF518A
ANKRD40
ZNF286A
STX7
SLC1A4
H1-4
TFPT
PRPF31
SLC39A13
H2BC5
RIC8B
ZNF140
CD93
PPP5D1
CALM3
CHMP7
GNB4
STING1
LARS1
KDM1A
TMEM222
POLR2J3
TCEA2
HMGB1
USPL1
UBR2
ZNF846
RBCK1
BCL2A1
IDH3B
RPL37
MARCHF5
CPEB3
KLHL20
GAS6
AQR
SLC37A2
NME1-NME2
NME1
SIRT4
MORF4L2
SPOP
UBE4A
HERC6
NFX1
BRWD1
ZNF148
GTF2H2
SUPT7L
SLC4A1AP
EIF2D
INTS10
ZBED4
MPG
SCAF1
TNFAIP1
IFT20
SAR1B
MCUB
ORC2
NAIP
GOSR1
INKA2
DDX20
INO80C
PRIM2
ZC3H6
SIRT6
ANKRD24
ACTR3
MKRN3
TRIP12
FBXO36
PSMD9
HPD
POLE4
CTNNB1
MRPS31
FOXP1
ARHGDIB
TMEM41A
SCAMP4
ADAT3
TRDMT1
N4BP2L2
KDM3A
HIBCH
POLDIP3
USP15
SEC22B
PPP3CC
MED4
MARCHF6
H4C8
ESCO2
RRS1
PLEK
ANKRD22
DDX23
TATDN1
NDUFB9
MALT1
SLC22A18
CCNL1
PSMC1
C1orf159
SLC45A4
VPS50
HEPACAM2
H1-2
ING4
ALG10B
GFOD2
H3C7
H2BC9
SLC44A1
SLC22A16
TIGD6
HMGXB3
EMC4
TRIM69
DCAF10
NUFIP2
CWC25
RXFP1
THAP1
MRPL27
EME1
FBXW11
ZNF420
ZMPSTE24
TMBIM4
BNIP1
COX7A2
COX7C
C12orf57
ZNF212
ASH2L
FNTA
PSMA1
DRAP1
C11orf68
MYBPH
BOLA1
TVP23B
ARL8B
POLR2M
TFEC
RPL27
H4C1
H3C1
BAZ2B
BMS1
DRG2
RPS15
ARMH3
SLC35E2A
SETDB1
TPR
ODR4
MCTP1
COPS4
TBRG1
H4C5
GTF2H4
CCNC
TXNDC15
PRPF18
AOAH
CAMP
CCDC59
TATDN3
NSL1
CCDC114
E2F4
OPA1
CCDC124
MYL12B
TSSK6
NDUFA13
WASHC5
NSMCE2
NUDT13
NOTCH2NLC
TFEB
TSG101
METTL3
ZNF76
CNPY3
ZNF331
TRIB1
SPIDR
PPIL2
DSCC1
CYP4V2
DENND4B
CDK5RAP1
MOB4
USE1
CBLL1
VTA1
NMBR
ALDOA
SIGLEC16
RNASE10
C1QA
PCNP
RBM45
LSM8
UTP23
RASA1
ETV6
PTGS2
TESPA1
ORMDL3
BRIX1
C18orf21
S100B
H3C2
MICU2
RPL29
PRKCI
HDDC2
MRPL34
MRPS15
LYNX1-SLURP2
LYNX1
H4C6
BANP
DOHH
LUC7L2
ZNF180
MBNL1
FMC1-LUC7L2
FMC1
UBLCP1
ZKSCAN4
PEX26
VIRMA
RAB11FIP1
ZNF557
WNT2B
NFKBIA
NUDT7
TTC13
SASS6
N6AMT1
ZCWPW2
AZI2
PSMC6
RAB3GAP1
RPL23
MRPS10
METTL6
EAF1
UNC45A
TLR1
NOTCH2
TCF3
ARHGAP9
MARS1
KMT2B
MRPL44
MRPL16
SUGT1
ZNF749
PDCD6IP
ARHGEF1
ZNF574
HARS2
HARS1
SIGLECL1
MAGOHB
C19orf53
TOP3B
COMMD4
MAPK1IP1L
H3C8
FBP1
TIMM21
FBXO15
COX18
CDIPT
RUFY3
NDUFS3
KBTBD4
NUP54
LTN1
SDHAF2
CPSF7
MX1
SH3TC1
SLC7A11
ADPRS
MRPL3
VRK2
UBE2F
RABGGTA
PTPN12
POLR3B
EIF2B3
NEK4
AVIL
LIN37
CNTRL
P2RY6
DNAJB12
POLE3
C9orf43
THEM4
RPL31
HEATR5A
F2RL3
BECN1
TMCO1
APOBR
NCF4
SULT1B1
FAM160A1
KRT36
ELOC
PDSS1
NSFL1C
DGAT1
POLI
C8orf37
SLC25A23
TNFRSF10A
NKAPL
WDR70
KMT2E
UNK
YIPF2
TIMM29
VPS25
HENMT1
TMEM65
PSMB8
WDR24
SLC25A32
DCAF13
TBC1D13
ZNF410
ANKRD13D
IKZF1
MED18
RAD23A
CCDC107
TTC26
R3HCC1
H2BC21
H2AC20
H2AC21
SFSWAP
CCNI
GSK3A
NDUFAF1
POGLUT3
SGF29
CCM2
SMARCA2
H4C2
TBC1D5
RFESD
RFX8
ZSCAN31
SLC33A1
ITPRID2
STX3
NPRL2
CYB561D2
UFSP2
EEF2
PRKCSH
CCDC151
RASSF5
SMC1B
RIBC2
LY9
SLFN12L
IFI6
RAD54L2
CD72
SERP1
EIF2A
MSL2
NACA
EIF3G
PPP2CB
LST1
H3C11
MTPN
LUZP6
ASB6
ZNF3
ERCC1
USP30
WDR87
SIPA1L3
GTF2IRD2B
CHD1L
RPL17-C18orf32
RPL17
BSDC1
PRKAB2
LIN54
MTERF1
DNAJB2
EIF3H
FLT3
EIF3F
H3C15
H3C14
TSFM
NUDT2
KIF24
CFAP298-TCP10L
CFAP298
ZNF573
TNFAIP8L2
RASSF2
C10orf88
HINT3
PIGL
ARL11
DESI2
THOC1
EIF1B
ACBD6
RFX2
ZC3H4
RCOR3
ARL14EP
MARCHF7
RPL7A
MED22
SNUPN
KAZALD1
MTMR6
RIPK2
ARHGAP24
RGS14
VKORC1
TM2D1
METTL18
C1orf112
RPL36
GPAT3
RPRD2
CPQ
DBN1
TFB2M
CNST
GDAP1
STAMBPL1
H2BC12
H2AC12
TARBP2
TMEM101
UBE2V2
RPL11
ZNF408
ARHGAP1
CAB39
HIGD2B
BBS4
RFX3
IQGAP2
ZC3H11A
C1orf53
CGAS
PPCDC
GPR141
SUGP1
MAU2
EFCAB2
RRP15
TRAM1
TRIM44
KASH5
CMTR1
FBXW7
NFE2L2
SNRPE
VAMP8
OR8G2P
ATAD2B
WDFY1
ZNF333
TOMM22
NUP153
ZNF527
TERF2
SNF8
MRPS33
SNX14
C1RL
RNASE2
AP1G1
LOC112694756
PIGBOS1
PIGB
NTAN1
AP2B1
MCOLN1
PSMB7
VPS29
RAD9B
HEXIM2
THOC5
TRIM25
FBXO34
MTBP
MRPL13
MAPKAPK3
CISH
DOCK2
NOTCH2NLA
FBXL19
DTNA
ATAD2
MED15
GABPB1
GOLGA3
ATP13A1
NAGA
RBM28
EXOSC3
RPP14
HTD2
RPL37A
C2CD5
MFSD3
KMT2C
TIMM10
PLAGL1
CAPN15
IL4I1
DMAP1
TSEN15
CDC73
NCBP3
E2F6
ZNF155
UHRF2
RSU1
ING3
NOTCH2NLB
UBQLN4
LAMTOR2
SMARCAL1
TMEM259
HEATR1
LILRB1
RUVBL1
SNRNP200
JMJD1C
AFG1L
KCTD18
MUC1
KATNBL1
LTBR
AFF3
FPR1
LGALS9C
MS4A14
KLLN
PTEN
C12orf43
YARS1
S100PBP
SRSF7
H2BC8
H2AC8
ATP2B4
CCPG1
C15orf65
C1orf74
DDX56
CRADD
RPF1
ARL6IP5
STAT1
RAB3C
RPL38
REXO5
ERI2
WDR55
OAS2
HCLS1
CCL3
ZNF337
LARS2
CCZ1
PDS5A
RPL30
NCF1
SYCP1
REXO4
DMTF1
FAM200B
GALNT3
KCNJ2
IFI35
PRKACA
C17orf75
SNRPB
OCIAD1
LSM14A
FKBP5
STK38L
MPZL3
CSF2RA
TMEM59
TTC4
VIPAS39
AHSA1
ELOB
NDUFB3
FAM126B
TMEM123
H1-5
PRKACB
H2AC16
PGM2L1
RBM12B