ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX535453 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◣ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

EXD1
CHP1
SEMA6A
H4C15
H4C14
DPY19L4
STX16
FAM98B
STX18
DDIT4
MTRNR2L2
IST1
MRPL21
IGHMBP2
H4C12
H4C11
SAR1B
GSTA4
NUF2
GBA
AAR2
FRA10AC1
TUBGCP3
NR1H3
ACP2
C17orf75
SMARCD2
H2BC18
H3C13
SLC44A1
NME1-NME2
NME1
UCHL5
RO60
SF3A3
FEM1B
DMAP1
H2AC19
H2AC18
H4C5
TPRKB
RAD54L2
WDR74
GALK2
COPS2
RCAN1
JRK
GTF3C3
PHLDA1
RRP15
H1-2
H3C3
RBBP5
SNAP47
JMJD4
MTRNR2L8
RARS1
EIF1AD
BANF1
NPAS4
DSTYK
TBC1D19
VWA8
DCAF10
RPL37
ATR
IFRD2
H1-4
AP3S2
FLOT1
IER3
TATDN3
NSL1
EIF2D
H4C4
S100A16
TOP3B
MRPL16
CDKN2AIPNL
NDUFB7
SELENOH
ACOT7
RPS7
RPTOR
USP30
CDK5RAP1
RAB5IF
MAN2C1
KMT2C
TRIB3
NDUFAF1
TSEN15
DHRS3
SCNM1
LYSMD1
NDUFA12
TRIP4
OGT
BFSP1
DCP1A
ZSCAN30
H2BC21
H2AC20
H2AC21
CUL4A
PCID2
C12orf73
CSRNP1
GTF2H2C_2
GTF2H2C
SPOP
KLHL20
DRG2
YWHAE
STAT3
RPS6
SPRY4
SNRPB2
E2F6
SSBP1
CLUAP1
LAMP1
COMMD2
H3C15
H3C14
S100A2
VIRMA
TACO1
TEFM
YARS1
S100PBP
UCKL1
WDR36
HEXA
BNIP1
C11orf49
ZNF212
METTL9
GSTP1
IRS2
SLC24A1
INTS14
TRIAP1
PEX3
ADAT2
MTF2
LRRC47
MANBAL
NDUFS3
KBTBD4
ZNFX1
JUNB
VPS25
AP3B1
WDR24
HMGB1
USPL1
EEF1A1
VANGL2
ST3GAL2
PLEKHM3
LARS2
TMA16
KANSL3
ADPRS
DPY19L3
SPATA24
H3C2
RTN4
WWP2
MRPL44
INTS12
GSTCD
IFI16
PYDC5
NEURL2
CTSA
ALG10B
TMEM101
EIF3G
ADPRHL1
STAT6
FBXW2
IPO4
ALKBH2
GTF2H2
GPRC5A
CCNL1
PSMF1
RPL32
TMEM256
MRPS23
NECAP2
SNX17
EIF2B4
DNAJC25-GNG10
DNAJC25
TOR1AIP1
DDX1
DNAJC24
DCDC1
TVP23B
DPP9
NOC4L
DDX51
MRPL3
SNRPB
ARIH1
E2F4
CCND1
PMPCA
ENTR1
TTPAL
VWA5A
DDX23
NDUFS7
SLC3A2
TMEM242
DMAC1
ACBD6
CTSC
ZNF391
AGMO
TBL3
PAFAH2
NFXL1
GGNBP2
H1-3
WDR11
SIRT4
RTF2
H4C6
HTR5A
ARHGEF12
ALG10
NDUFC2-KCTD14
NDUFC2
SSBP2
SREK1IP1
CWC27
EFNA1
RBM28
RAB18
AURKAIP1
RTEL1
TPR
ODR4
NCBP3
ATF3
ANKRD18B
CASC3
ZC3H6
RCOR3
TRUB2
COQ4
RPS8
POGZ
NOTCH2NLC
RPS2
DPH7
RINT1
INO80C
ZNF827
KBTBD6
RPL26
INTS5
TRIB1
SERPINA3
CCNC
INTS1
DIAPH1
KDM1A
CCDC107
DRAP1
C11orf68
COX16
IQSEC3
CHD1L
PRKAB2
ZNF830
CCT6B
RACK1
KCNMA1
RAB7B
LRRC37A3
SRFBP1
PIP5KL1
ZBTB45
MTAP
DPP8
SLC33A1
EDC4
SH3GL1
ZMPSTE24
ZSCAN25
DUS1L
MTERF1
FZD1
MNAT1
PRKCE
AVEN
CPLX2
RRN3
CDC73
THAP5
DNAJB9
GRAP2
CHI3L2
UCN2
H2AX
SLC25A51
RBM45
RILP
MUS81
COG2
FAM227B
DTWD1
RGPD2
RGPD1
UQCC1
UFSP1
MED23
TTC4
BAGE4
BAGE3
BAGE
SEC16B
GTF2I
RFXANK
BORCS8
C10orf88
DUS2
DDX28
GOSR1
DHX8
ANP32E
KNL1
TAF1C
MRPL58
CCT7
PRADC1
H2BC8
H2AC8
PSMD6
PRRG2
NOSIP
OTUD7B
CSNK1D
ATXN2
RCC1
H2BC14
H2AC14
KMT2D
ATP5MF-PTCD1
ATP5MF
TTC33
TRPC4AP
ITGB3BP
EFCAB7
NOB1
RPL11
COQ5
WWTR1
NOC3L
CFAP298-TCP10L
CFAP298
FAM133B
MRPL38
SUPT5H
H4C3
SRA1
WWOX
BRD2
BCL9
HEXIM2
ORMDL3
CCDC86
POLDIP3
TIGD1
EIF4E2
REX1BD
CPPED1
H1-0
RPL28
NFATC2
SOX10
BOD1L1
BANP
NCOA3
SRSF6
PPP4R3B
PSMB6
TUT1
ZNF106
ZNF253
LGI4
ZER1
RPS27
SLC35A3
ZBTB37
ANKRD40
MTHFS
ILVBL
RUVBL1
VPS72
ZC3HC1
BICD1
NSUN4
ATF6
CALR3
C19orf44
RPL23A
MRPS14
INPP5F
SNTB1
EIF4A2
NBPF1
RFX3
TTI2
HNRNPA1L2
MRM3
GLOD4
ZSCAN22
ZNF554
TP53BP2
NHEJ1
RPL41
SPIN2B
POLR2J
LSM8
LRRC37B
TFAP2B
RPL29
WASHC5
NSMCE2
MRPL39
RPS3A
RPS14
DDX19B
AARS1
SLC36A1
FAM189B
NMNAT1
LZIC
FUS
RPL13
SNRPE
CFAP20DC
CT45A3
LDAH
SLC26A2
EXD2
RNF216
USP2
HOOK2
CCDC88A
TMEM115
RPL13A
MCOLN1
SNX19
UTP3
ANAPC5
C16orf72
AP4E1
RPL7
RDH10
ZNF708
GPR176
EPHA3
ZNF56
ADNP
SDHAF3
VPS45
PYGB
ABHD12
AK3
PCOLCE
SEC13
C16orf91
TAF5
TRA2B
CHCHD2
MFF
CAAP1
LTBR
NAA20
SLC20A1
BBS1
SEC22B
COPS7B
CBWD2
NBN
MBTPS2
PARP4
KCTD3
TENT4A
ZCCHC4
SART1
TPK1
LIG4
YJU2
ABHD13
THOC5
NDRG1
TBL1X
RBM14-RBM4
RBM14
PKIG
TAF13
DCUN1D5
H3C8
PBK
CDH19
CWC25
MRPL48
LRRC59
HNRNPH1
MKRN1
LRP6
NOTCH2NLB
C8orf33
AARS2
LSM5
NFE2L2
INO80B
RAF1
ZNF791
ZNF490
AVL9
COQ8B
FAM228B
ELOB
SF3B6
LDHA
NDUFAF5
ESF1
OSBPL11
CEP120
NACA
TRIM46
KRTCAP2
NREP
CAPS2
LYPLAL1
PLEKHG5
POLG
FANCD2
POLR3B
FRG1
LAMTOR5
RMDN2
PCOTH
MIPEP
UNK
POLR2J3
MTR
TCTE3
ERMARD
RANBP6
MARCHF7
ZNF564
RPL7A
MED22
CSKMT
C11orf98
COIL
STEAP1B
NOTCH2
SEC61A1
VPS33A
EIF1
CDC16
DEF8
RFFL
IDH3B
ARMH3
DDX5
GPATCH4
MEOX2
DNM1L
REXO4
GTF2IRD2B
MRPL40
HIRA
TOMM20
ID1
SMG8
ZNF45
H2BC12
H2AC12
CRB1
INTS2
SLC25A21
APH1B
LTBP1
USP4
MAPRE2
MBNL2
PARP2
NSA2
GFM2
STMP1
ZBTB40
LONP2
ABCC11
TUBA1C
RBM17
ZNF443
SURF6
PSMB4
FBXO38
CBX5
HNRNPA1
H2BC11
H2AC11
TTC26
KDSR
ERMP1
H3-2
ZNF205
LOXL4
BOD1
DNM2
RPL5
LTA4H
PNPO
CALM2
ZNF76
WIZ
GNPAT
C1orf131
SRSF5
LUC7L3
STK4
ALDH9A1
ATP5F1E
CHD1
ATAD2B
SPRY2
SH3TC2
CT45A9
CT45A8
CT45A2
ZNF337
SPRED1
FBXL18
TAF3
PRPF6
TIMMDC1
TMEM170A
IPP
GOLGA4
MAGEA2B
MAGEA2
IL6R
XKR7
DCAF8
UBXN1
RPS21
EFCAB2
TAGLN2
HEMK1
MMAA
H4C8
ZNF561
ZNF609
MYPN
CLTC
COMMD1
CCT4
TRMU
MCL1
SACM1L
RPL37A
GRPEL2
MLEC
DHX9
PEX2
COA1
CTNNB1
TMEM41A
SNRPD1
RNF6
BORCS5
LARP1
H4C2
SPRED2
DUSP4
PRNP
IFT46
HIKESHI
RBSN
RPL35
ARPC5L
KIAA0895
G6PC3
DCLRE1B
AP4B1
CAPRIN2
ARGLU1
H2BC13
H2AC13
APP
WASHC2C
CCDC90B
C12orf57
PPP2CB
PTPN13
GFOD2
TIMM10
GTPBP3
PDE8A
CHML
CTHRC1
OPN3
BACE1
SPRYD4
ACOX3
TRMT44
BUD13
DIDO1
GID8
SLC35A4
APBB3
ABCA3
LIFR
OR2L13
MRPS15
MDM4
THOC3
SLC35E1
DYNLL1
SFPQ
SEPSECS
H2BC17
H2AC17
SRSF9
ZNF282
DISC1
SPIDR
PKD2L2
HMCN1
FLRT3
FXYD3
ARL14EP
EIF2B3
COMMD4
TMEM167B
ESD
RPL30
MC1R
BAIAP2
ABCF2
TMEM199
POLDIP2
SOD2
WTAP
TRAPPC3
MAPKAPK5
ALKBH3
RPL12
LRSAM1
BMS1
SRSF2
MFSD11
SH2B1
ZBTB17
CNP
DNAJB1
THEM4
TECR
GABPB2
ARMC8
TMEM106B
ZSWIM4
SUPT20H
ZNF846
SRRM1
GRHPR
KDM8
SLC6A15
EMP1
FOXJ3
MANF
SLC9B1
PDE4DIP
NECAP1
TAF10
H3C4
KLHL9
ARCN1
INPPL1
UBAP1L
RPS28
NDUFA7
PANK4
C2orf42
C18orf25
SLC25A28
PIKFYVE
MTRF1
ABHD2
ATF1
HM13
INTS6
ANKRD13D
RGL1
ARPC5
GEM
NAA16
SNTB2
USP28
ZNF579
DAB2
NAGPA
PSMD11
TMEM186
PMM2
SRSF7
TRMO
H2BC4
H2AC6
BLOC1S2
GNAI2
GPR89A
ADAM17
UTP25
RBM7
C11orf71
NR3C1
TSN
FAM207A
CDC25C
FAM53C
MTMR2
CCDC59
MTMR9
ZNF513
MCAT
ATP6V0D1
MAT2A
FNIP1
MRPS18C
HELQ
ABCB10
TSSK6
NDUFA13
SLTM
FGFBP3
DGAT1
LRCH4
FBXO24
PCIF1
SMG7
BCAR3
PLGRKT
NDUFAF6
DPH6
B9D1
ZBTB38
H4-16
CASP7
TIMP1
TIGD6
HMGXB3
CCDC174
SNF8
CIAO2B
CES2
MRPL1
KRR1
BTG1
RSL24D1
SREBF2
SLC39A6
ARF4
SLMAP
ZC3H11A
LMAN2
SLC30A6
MTG1
POMP
STX6
YIPF6
ZNF658
DMTF1
RGS2
BOC
CCDC92B
ACTL6B
KCTD5
RMND1
ARMT1
AARSD1
RPL34
EMC4
LPCAT3
ZNF696
YAE1
CLASP2
PIGL
EEF2K
CEMIP
ZNF506
A2M
SPATC1L
TCEA2
GARS1
MTIF2
TERF2
SLC39A13
TMED2
ARHGEF7
MAK16
AMOTL2
ZFP62
DELE1
JAGN1
USP3
NR4A1
PDE4A
MKRN3
SHROOM1
MRPL20
AHCTF1
HIF1AN
SRP9
SLC38A9
UBOX5
FASTKD5
CNEP1R1
ATXN7L2
MKRN2
ZNF3
MRPL53
IMPDH2
AVPI1
PTPN1
DPH5
NQO1
BPTF
MAGEA3
CAMTA2
SSNA1
ANAPC2
KLHL12
AP2B1
SELENOT
FAM3C
NTMT1
AFF4
ACBD3
R3HCC1
SLC17A5
SRI
SP1
PIGV
APOD
PEMT
PSMD3
WDPCP
MDH1
FAM149B1
ECD
RANBP2
RPL6
ACAD9
EIF3C
GOLGA1
DEDD
KIF15
KIAA1143
EEF1AKMT2
MLST8
GPATCH3
AHCYL1
ANKRD46
MRNIP
COX20
STXBP3
PDE7A
SPATA17
GPATCH2
MPV17
RPL22
UBL7
MAGOH
POLR3E
ZFAND5
R3HDM2
FBXO22
MAPK1IP1L
RRP8
ILK
NAA60
SUGCT
MPLKIP
NOP2
NOXA1
OMA1