ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FLOT1
PLCB2
NADK
LAPTM5
NCOA2
HMGCS1
PPCDC
SKIL
ARHGAP4
UNC13D
MTRNR2L2
CD38
LCOR
C5AR2
GFOD1
NIBAN3
DHRS3
SPATA1
GNG5
CALR
MTRNR2L8
PCNA
CDS2
ARHGAP45
RASGRP2
DZIP3
CIP2A
MBD6
MAP2K3
FGR
INSIG1
COX20
MYO1G
MYO1F
IDH1
UPF3A
ARIH2
RPS6KA1
P2RY2
CENPH
WDR74
ZCCHC24
NFKBIA
KRI1
NRL
DCAF11
FDFT1
FDPS
MKLN1
NFIC
KAT6B
SSH3
NLRP3
LYL1
ICAM1
BAZ1B
DENND4B
RASSF2
C16orf54
SLC25A19
RBM15
EXOSC4
DRAP1
C11orf68
C11orf91
KAZALD1
DNAJB1
MSMO1
KRAS
PSMD3
PKN1
POC1B
POC1B-GALNT4
EMP3
KEAP1
ZNF740
CSAD
SEC14L1
SNX15
FADS3
RARG
RAB3D
CTBP2
GHDC
CEBPE
LYST
INAFM2
CYBA
BHLHE40
MRPS31
RAB11FIP1
BIN2
SMARCD2
HUS1
ARHGEF18
SREBF1
MCRIP2
ADGRG5
NDUFA4
EPM2A
PIK3AP1
PACC1
TBL1XR1
AGTRAP
PDE12
LRMDA
SMIM20
HMGCR
CDCA7L
NPEPL1
EVL
DUSP10
TCTEX1D4
BTBD19
SLC35D1
E2F3
GRK2
PTPRCAP
H4C11
LST1
SLC22A18
NOL4L
P2RX5
FERMT3
CFD
YARS1
S100PBP
UBE2E1
MTRF1L
AP2S1
NR2C1
IMPDH1
CSK
TM4SF19
ARRB1
KRT8
CYP51A1
RAP1GAP2
EVA1B
ALOX5AP
AHNAK
ANKRD13D
ASB1
SH2B1
CCDC174
MYBPH
HSP90AB1
PLIN2
JUP
TRIB3
HIVEP1
RAB37
TANK
SQLE
GPCPD1
ADGRG3
RBBP5
ANP32E
NCF1
DUS1L
SMCHD1
NINJ2
ZNF746
GBE1
HECTD3
IFNGR1
ARL4A
CD1D
PKN2
ATF3
WDR43
H4C14
H4C15
MAP3K8
TPRA1
MCRIP1
PWWP2B
PIKFYVE
SMG6
TAGLN2
ETFBKMT
SLC12A6
RCAN1
C12orf75
RMND5A
PEAK3
PLEK
UMODL1
CTTN
TBC1D10C
SLC16A3
ZNF414
SLC1A5
DENND2D
PPP2R5B
TLR9
SIPA1
CTDSP1
GPR160
MPG
ICAM3
CPSF4L
C3orf86
SH3BP2
SELPLG
RARB
MINDY2
CDK13
SH2B2
ADRM1
PDE8A
GMIP
SEPTIN9
S1PR4
LDLR
DENND6A
CAPS2
H4C9
OPA1
S100A2
SH2B3
TRAPPC5
NKIRAS1
NR1D2
ATXN7L2
BAZ2A
LRPPRC
GFI1
PDCD4
AXDND1
MTRNR2L9
PCYT1A
SCD
ZNF217
CTCF
LOC388282
ATP2A3
TMEM101
FBXO41
H6PD
ACACA
TSPAN32
C11orf21
GPR132
PPARG
PCNX3
P2RX1
GPATCH8
WNT10B
SLC17A9
TREM1
TRPM2
MVK
POM121C
CCDC154
NAMPT
STEAP3
RBKS
BABAM2
KLHL24
MYADM
CLTC
NCOA4
PHF19
PRTN3
KBTBD2
RGPD2
RGPD1
NDRG2
ZDHHC17
LY6K
KCNAB2
CHPT1
MICAL1
IRF2BP1
MTHFR
CLCN6
LZTS2
CCDC9
ZNF276
PRNP
VPS72
TMEM143
FKBP14
UBE2J1
TRIM11
ZGPAT
ARFRP1
PMPCB
TAF1A
ICAM4
PTCD1
CPSF4
PLEKHA8
BPI
MPO
TMC8
PRKCD
C16orf74
LONRF3
OGFOD2
COPS7A
ATR
TBC1D14
QPRT
HBP1
H4C13
LINGO1
MTF2
TEX2
MFAP4
C19orf53
ZSWIM9
LIG1
NOG
LPCAT3
NUDT15
DOT1L
ADM
STK35
STK3
HSPH1
VIPR2
TFAP2A
GOLIM4
ZNF584
KMT2D
LIMD2
CAMP
CPQ
PPRC1
QRICH1
FRA10AC1
PIP4P2
ITPRIP
PLEKHA2
MRPS15
H4C4
TNFRSF10A
IZUMO1
KANSL3
ZNF846
SRF
BORCS7
IQGAP2
KLLN
LZTFL1
MYO18A
DOCK2
MAPK12
SPN
NTSR1
NEURL2
CTSA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF149
FKBP5
LRRK2
METTL25
CCDC59
SKIDA1
BANP
SP1
RIOK3
FRAT1
NIT2
EP400
DYRK1A
LMNA
EPS15
SNUPN
MAFG
C3
UCN2
ZNF76
ZDHHC4
LSG1
NFIA
ATXN2
AFF1
SC5D
CUL2
KCNE1
DUSP6
IFRD2
DMAP1
MIEF1
UCP2
NLRC3
C5AR1
NDUFS7
ING1
UBR4
MAP1LC3B2
FAM214B
DHX33
VDR
FCRLB
H4C12
LTA4H
APBB1IP
UHRF2
YWHAQ
PIM3
FBXO6
SPRING1
RNFT2
ATP11A
HDDC3
PEX5
C15orf62
GDPGP1
CIB1
PLEKHM1
RWDD1
CNOT2
TM7SF3
EVPLL
SREK1IP1
CWC27
GFM2
CHD9
TBP
PSMB1
STING1
UBC
HSD17B7
POLG
CCNL1
TMBIM6
CLIC4
ENO1
AHCYL2
ZYX
CDC42EP4
MFN2
DNAJB2
NOTCH1
RBPJ
KMT5A
MLEC
BCAT1
ZNF317
PRSS57
SCAP
TPD52L2
SMAD3
TBL2
KDM3B
TRIM14
MAPK8
SAT1
NKG7
SLC25A15
DYNC1I2
HMGN4
B2M
DNAJB12
MRPL24
OGA
GCDH
FCN1
ERLIN2
EIF3G
COMMD4
MRPS23
PGLS
RAD54L2
THEM4
FOXP1
PSMF1
VAV1
ZNF121
ALDH3B1
SETDB1
PTPN7
MTRNR2L10
OTUD7B
MAD1L1
RFFL
SCAMP4
ADAT3
PGPEP1
MDM2
DAGLB
CYB5R4
NCOA7
PEX14
PARP2
LFNG
SLC35E2B
ZFAND3
ANKRD33B
ARPC1B
PRDM10
PTP4A2
PHETA1
DUSP11
ZNF350
CCL3
RNF139
RPL22
WDR18
CXCR3
CRACR2B
OSM
PHLDB1
PSMD1
NUTF2
CENPT
TMEM41B
EIF1AD
BANF1
GIT2
GGPS1
ARID4B
APOM
BAG6
STX18
SH3BGRL3
SLC25A18
MTMR4
MFSD8
ABHD18
PA2G4
IPO4
SYT7
PLD6
CDC42EP3
NOTCH2
RBM7
C11orf71
CD63
SH3RF3
PNO1
TRIP4
UGP2
ANPEP
RAB20
C7orf26
EMC8
COX4I1
SUSD1
RIPK1
ST3GAL2
SH2D3A
TRIB1
LNPEP
NMNAT1
LZIC
GLUL
STRIP1
TRIM38
THRA
EXOC2
RASSF4
CFLAR
ATP5MF-PTCD1
ATP5MF
CLDN12
GBA
PHF12
DBP
GHRL
ZNF503
ANAPC5
TES
U2SURP
ZNF775
NDRG1
BCL3
SIDT2
DENND5B
NBAS
PKM
PRELID3B
USP36
BSDC1
WT1
AZIN1
PGD
EEA1
PDPR
TMEM167B
SYK
CAST
DOK7
RCOR3
INHBE
ABT1
SIRPB2
LGALS9B
SEPTIN2
HDLBP
CCDC130
LPXN
RBP4
ZNF609
ETV6
PROSER1
NHLRC3
RASSF5
REPIN1
RAP2A
ZNF862
PRXL2B
DYSF
HEXA
USP8
CDKN2D
CASP9
SLC25A16
CCDC146
TMTC3
CEP290
KDELR1
LPAR2
CSRNP1
SF3A3
NEK2
MIDEAS
RRAS
ZNF652
SKA1
GTF2B
ZNF577
FAAP24
CEP89
NUF2
LONP2
ABCC11
PPP3CB
MFSD10
PEMT
HMX3
ARSG
SLC16A6
PRCC
QPCT
DDX23
DRG2
WASHC2A
SLC41A3
HELZ
POM121
EBAG9
TFAM
DOK3
SLC22A15
CYP1A1
C11orf24
NDUFAF3
DALRD3
MRPS17
PLAUR
KBTBD6
ABHD2
SIRT1
SLC3A2
MRPL4
CES1
ITGB2
NT5C2
SOD2
ACAT2
ZNF318
CD164
LAMP1
RNF168
PLBD2
FZD5
LYSMD2
PTRHD1
CENPO
AMN1
OCIAD1
ASS1
WTAP
RNASEH1
COQ10A
IGF2BP3
SH2D4B
GGH
PFN1
HMGB1
USPL1
C1RL
RPLP0
SNRPB2
PPARGC1B
NHLRC4
CD79A
ARMC1
MFSD14A
ITPR2
UPP1
ZNF212
DDIT3
EFCAB14
CCDC186
ARID2
PLEC
COX19
NUDCD1
EIF4EBP1
SHLD2
GLUD1
ZNF385A
TPCN2
CCDC90B
PXYLP1
SH3TC1
THUMPD3
MTMR6
N4BP2L1
DUSP14
CDK17
SPOCK2
SPI1
ANXA2
YTHDF2
GGA1
AIF1
RPP14
HTD2
TRIP6
RFESD
SMG8
DPH1
GALK2
COPS2
CDYL
FBXO31
NR2C2
SNAPC3
MAP1LC3B
TRAPPC10
VIRMA
ZNF337
UNKL
ACSS2
SCP2
POLD3
ARID5A
CCDC114
SLC22A4
HEXIM1
PCCA
DHCR7
MXI1
RPS12
SERPINF1
CD55
P4HA1
NOLC1
AQR
CAB39
UBE2Q2
SH2D3C
RETN
DDIT4
TMEM248
PDSS2
C2CD5
ZFP1
FAR2
PCTP
TXNRD1
MAD2L1BP
ADORA2A
INTS6
VPS50
HEPACAM2
NEK6
ARL8A
RAB44
CHI3L1
MACROH2A1
ZCCHC3
CLK2
EDEM1
DHRS12
TTLL9
RALB
RPF2
MAST2
SLC25A36
CYTH1
LRRC25
SAMD10
TTC26
NUDT9
NPAS1
ATP23
NBPF1
CREB1
CLUH
REL
ATP2A2
TUBA4B
TUBA4A
POR
GSTO1
TARS2
SLC35C1
HECTD1
CD244
SLC26A11
UNK
NBPF15
WDR48
SCN11A
CYP20A1
KRR1
ITGAL
NDUFB6
ZNF687
NPRL2
CYB561D2
ESYT2
SCNM1
LYSMD1
TMEM242
NRIP3
ARHGEF2
CLDND1
ELOVL3
FOXD2
SEC61A1
SFMBT2
NIBAN2
TRIM25
STK38L
FNDC3B
TUBGCP3
PLK3
DCK
CDC37L1
NR3C1
QTRT2
CCDC191
PACRGL
SLC24A1
BOD1L1
TMA16
S100A9
SDE2
PIP4K2B
DCAF8
INTS10
MEPCE
HEATR5A
DYNC2I1
PIDD1
USP35
KCTD21
PYROXD1
PLAC8
HIPK1
RBM28
SRXN1
MDK
SLMAP
TIMM23
YES1
FBXW4
ZNF3
THYN1
ACAD8
AKAP9
MC1R
CRLF3
KNSTRN
LMBR1
DCTN1
IPO13
CITED2
LOC100289561
UBALD1
ZNF335
RABL2B
RABL2A
MAPKAPK5
NME6
NUP85
CACTIN
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
VDAC2
DYNC1LI2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
BLCAP
REXO1
TSNAX
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PAK1IP1
C6orf52
PES1
UPF2
SKP1
IRGQ
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
DPH6
IQCG
SART3
GOLGA5
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
SMC2
MRPS5
ANAPC7
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
MED29
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PIN4
NDUFA10
OAZ3
SUCLG1
PTGES2
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17