ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671314 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◣ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
MTRNR2L2
POLR3E
SNX16
SHF
B4GAT1
PPP6R3
KNL1
POLG
DPP9
SACM1L
TBL1X
PRMT5
DHRS3
FBXO31
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
GSTA4
NDUFS7
C8orf37
CCDC107
RAB11A
H4C8
MTRNR2L8
H4C12
ILF2
MTERF4
ELF1
WBP4
RPS29
TRIM41
NCOA7
TIA1
ANG
METTL26
TTI2
SMARCC2
BCAR3
FLOT1
NME1
SIRT4
STX16
RAD54L2
STAT6
CSRNP1
PSMB3
NUF2
HMGN4
TMEM242
LTBR
SCNN1A
GTF2H2
PPEF1
MTF2
HSPA6
OR1F1
YARS1
S100PBP
NFE2L2
CASC3
POLDIP3
H4C14
DRAP1
C11orf68
EIF2D
ATXN7L2
DDIT4
SERPINE1
HES1
ZNF839
FRA10AC1
TACO1
H4C15
FAM227B
DTWD1
MED23
RPL37
ZNF827
MRPL40
HIRA
CCNL1
TMEM259
TEFM
CCN5
WDR24
SNX18
MED16
SAR1B
TNPO1
LRRC37A3
SMARCD2
ANP32E
USP30
JUNB
TRIB3
RBFOX2
RUVBL1
EEFSEC
TRIP4
SLC44A1
C19orf53
RNF207
UPK2
MRPS35
EIF4A3
RNASE4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SPIDR
ATF3
SOD2
WTAP
TRIB1
BAZ2A
TSFM
MRPS31
DCP1A
PSMF1
SLC9A1
ARID1A
R3HCC1
POLR3B
TOB2
MAT2A
OPA1
IARS1
WDR36
GPT2
ARID5B
LRRC59
INO80C
TOP3B
KANSL3
MRPS15
GADD45A
ANO10
ABHD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
GTF2H2C_2
GTF2H2C
TMEM41A
H4C4
IQSEC3
CDKN2AIPNL
SNRPE
CAMK2D
H1-2
MRPL21
IGHMBP2
DCAF10
GSTCD
INTS12
CALM1
PLEKHG2
MKRN3
GEMIN7
CD8A
COMMD2
JUN
GTF3C3
NR1H3
ACP2
GABARAPL1
LASP1
NDUFC2-KCTD14
NDUFC2
S100A2
C12orf73
RGPD8
RGPD5
RGPD6
DCLRE1B
AP4B1
NUP54
C17orf75
PHACTR4
SNAP47
JMJD4
EPB41L4B
HTR5A
GBA
DMAP1
ATF1
C8orf33
KDM1A
EIF3F
SPRED2
PCBD2
ARL8B
PRKCE
PXK
STX18
TAS1R1
NOL9
ZSCAN22
ITGB3BP
EFCAB7
PEX3
ADAT2
PROSER1
NHLRC3
CALM2
DDX1
CEBPB
SH3BP4
ATP5MC2
SF3A3
EEF2K
GRIK4
KRT8
STAG1
HMGB1
USPL1
KLF7
ANKRD39
TMEM132A
CELSR3
TAMM41
RHOT2
DUS1L
INTS1
MAML3
ZNF212
NLE1
MRPL39
SMG8
DTNA
NABP1
SUGCT
MPLKIP
AURKAIP1
TIMMDC1
COPS7B
MAF1
STK40
ADPRS
FAN1
NSUN4
MFSD11
SRSF2
CCAR2
TARS2
LSMEM1
HINT3
G6PC3
RBBP5
ARHGAP24
TMEM248
UQCRH
LRRC41
TRIM8
POMZP3
SSBP2
PPARD
MTLN
TBC1D19
ATXN2L
SIAH1
PPARG
NFKBIA
H4C11
MAD1L1
TMEM167B
FAM43A
SURF6
MNAT1
SCNN1G
CCDC33
RTN4
H4C3
SEC31A
LAMTOR5
ANKRD46
ZNF609
VPS72
ABCG1
TAF12
NBPF1
AHR
NSFL1C
TGIF1
FUS
C3
ZFP36L1
KDM4A
GFM2
TUBGCP3
BHLHE40
SLC25A45
KDM3B
BCAT1
VIRMA
DUS2
DDX28
ZNFX1
SLC24A1
GFER
UNK
CTDSP1
STMP1
PIK3R1
LSG1
RWDD3
ZNF461
SRRM3
MRPL1
MRO
LMO4
BCOR
TRIAP1
RBM28
C18orf21
RRP15
MRPS23
ZSCAN25
SNX17
EIF2B4
CLK3
SLC7A11
ZBTB45
MOB4
EIF4G2
TRDMT1
ABHD12
NLRX1
MRPL3
TAF3
FAM228B
SF3B6
FTL
GTF2A1
CCND1
AAR2
H2BC9
H3C7
SLC7A5
CDK6
SAMD4A
HSP90AB1
PGRMC2
VPS25
H4C2
LFNG
AHCY
GPN3
FAM216A
GOT2
SRRM1
KMT5B
STEAP1
SELENOH
CDC25C
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
FAM53C
MAZ
ZSCAN12
SLC33A1
CRBN
MTHFD2
RHOF
DIP2B
PSMD3
CLUAP1
PET117
KAT14
PAFAH2
STK17A
PPA2
ETS2
KDM2A
SAAL1
BRD3OS
OXTR
MRPL44
PSMA1
PDE8A
SPRYD4
VPS36
EXOC2
DDX6
MEF2C
ROR1
HNRNPD
CITED2
AARS2
TATDN3
NSL1
TTLL4
MTHFD2L
RXRA
TAB1
SSRP1
CA2
MRPS2
C9orf116
VEGFA
MECOM
ZNF843
CSF1
H2AX
BZW2
AFF1
ANKMY2
MTREX
DHX29
SRSF7
SLC25A21
TMEM184A
B4GALT3
DGAT1
IFIT3
TCF7L2
MTOR
SLC25A3
TPRA1
ATF6
ARL6IP1
AMOTL2
ALOXE3
CXCL2
RAD50
FAM72C
FAM72A
SLC35E2A
NGLY1
SMN2
SMN1
OXSM
NUFIP2
YBEY
MCM3AP
FUT8
PTCD1
CPSF4
ATOX1
FAM98B
DUSP1
HNRNPA1L2
ARHGAP22
NPAS4
HUS1
HBP1
ZDHHC4
ARHGEF12
NDUFAB1
RPL28
TMEM158
CCDC200
SDC4
C11orf49
NKX2-5
ZC3H10
MTERF1
POMK
BTF3
SRGAP1
TOB1
N6AMT1
PIK3R3
WDR11
FRG1
MDP1
THOC5
NDUFS4
KRBA2
IL6ST
ZC3H6
SRP9
MCOLN1
AMACR
DSTYK
SMAD3
MRPL53
XPC
LSM3
TM4SF1
WIZ
CABIN1
RPS20
BRIX1
HERC3
PYURF
PIGY
ZMPSTE24
NDUFA12
ZFP91
PTPN13
DDX19A
AGK
BBS1
OSMR
BRF2
KAT2A
CYCS
PACSIN2
CXXC4
NOL7
BMF
RNF216
WDR31
COX7A2
DACT3
CTNNB1
EIF3B
LATS1
COX19
PEX6
CNOT2
UBL7
TRA2B
SRA1
RPA3
METTL25
CCDC59
PARP2
DYNLL1
GBE1
MTMR2
TRIM52
NUP188
DOLK
PMAIP1
TM2D1
HSP90AA1
TERF1
ZBTB9
SLC38A2
PPP1R18
VRK2
TAF4
STAT3
FOXJ3
TXNIP
ZNF721
PIGG
ALG10B
EIF4A2
SAMD4B
SLC37A4
ACSF3
MSANTD3
PDE12
CIPC
NIPBL
HEMK1
ARRDC2
MRPS10
USP42
PIKFYVE
ASH1L
PCMT1
POLR2C
ERRFI1
ARL14EPL
RRP1B
HSF2BP
SMG7
GLIPR1L1
PSMD9
HPD
UGP2
RGS16
INHBE
BTG1
LARS2
MTMR6
TUBB4B
H2AC19
H2AC18
SOCS2
RPL10A
SLC38A1
ARMC5
BIRC3
FEM1C
MOGS
FNDC3B
SNRNP48
MOK
FAM50B
BMS1
EDC4
DNAJC2
TRAF6
RAG1
H2BC11
H2AC11
MCIDAS
TIGD1
EIF4E2
ANGEL1
MOB3A
IZUMO4
ATG16L1
IPO4
RNF6
ADH5
TTC26
ZNF391
CALD1
TIMM44
GGA1
EIF1AD
BANF1
MAP1LC3B2
RBM45
MORF4L1
GPN1
CCDC121
ZNF598
PTPRM
MAML2
COMMD1
ZNF3
LARP1
SEC11A
CXCL8
TGOLN2
RPL7A
MED22
JRK
KIF21A
NRP1
DAGLB
MAPKBP1
PPP4R3B
KAT5
HNRNPAB
PRPSAP1
SIK2
ZSCAN9
CPSF1
SNRPB2
FXN
POC1B
SORL1
POC1B-GALNT4
TSR3
GNPTG
B3GALT4
CCDC88A
NOTCH2
DPY19L4
MKRN2
UBA2
IP6K3
DIAPH1
HEXB
SEC13
CCNC
MTIF2
KIFC1
WASHC2A
PPP1R12A
INSR
DISC1
SYT7
BANP
TACC2
PEX14
TES
SYNRG
NOP56
ERCC6L2
EIF3G
YWHAG
NRF1
LPP
VAMP1
ZER1
DYM
KIF5B
PARL
MAN2C1
PRDM1
TAF10
XRN2
NDUFB1
CPSF2
NQO1
SH2B1
DUSP6
WDR70
PSMG3
MAGOH
VWA8
VPS4A
TANK
YIF1A
ELMO1
DUSP10
HDAC2
ZBED3
SSBP1
SUPT3H
MRPS25
CHMP1B
GALK2
COPS2
CACNB3
SETD9
NSRP1
NRL
TAGLN2
SUMF2
PCK2
KMT2D
RMDN2
SLC27A4
ZDHHC6
VTI1A
SPATC1L
CDK5RAP1
MARCHF6
GPAT3
ADGRL2
PRICKLE4
FRS3
TM4SF4
ZNF579
FSTL3
MAPRE2
DPH7
KLF10
COX16
H2BU1
H2AW
DGCR8
CSTA
TMEM101
HES3
PKM
MRPL12
EIF3C
DNAJC25-GNG10
DNAJC25
ZFP36L2
SCAMP1
EPHB3
RET
IL20RB
FSCN1
CBWD5
RBSN
RANBP2
SLTM
H3-3A
NOL10
QSOX1
DLC1
NDUFAF5
ESF1
TOMM22
MGST1
RABIF
RTEL1
VAMP4
B4GALT1
PMPCB
POLR2J
GNAI2
DBNL
E4F1
PLD1
BTN3A2
ASNS
NUP107
APP
SLC39A1
FBXO28
U2SURP
CREB3L4
TENT4A
TRAF7
MYH9
ID2
TMEM222
FOS
SLC25A51
TBC1D13
IER3
GOLPH3
PSAT1
VWA7
MAP4K5
ATL1
XPOT
TMEM134
TMEM168
YWHAH
PRDX2
TRAM1
HMGA1
GTF3C5
ZNF460
TMEM170A
RPL22L1
ZFAND2B
ZNF205
GUCY1A2
PCDH1
DEF8
CCN1
FAM207A
SMIM12
RANGAP1
ACBD6
NOB1
ZC3H7B
NAA80
HYAL3
CIZ1
GTF3C4
DDX31
ANKLE2
MLEC
BCL6
FBXO4
PLK3
IL1RAP
CUL7
NOCT
RPL5
NARS1
THOC1
STAM2
ZFHX3
FNTA
C10orf88
RAB18
ZNF165
TBC1D31
NOXA1
RIN2
FAM118A
LNPEP
STMN3
TRMT61B
ADPGK
DR1
CBWD1
C12orf57
CDC16
CALU
MCCC2
ITPR1
USP53
EMSY
PDZD9
POLR2J3
OGFOD2
POLE4
REV3L
WASHC2C
EIF2B3
RAD23A
LPCAT4
NFAM1
TMEM179B
ATG4C
GFOD1
CLIC4
SKIDA1
TXNDC15
HAGH
FAHD1
DENND1B
TMEM267
CCDC80
ZNF577
SORBS2
ZFAND3
PBLD
HNRNPH3
PYGO2
LOC101928120
TNPO3
ALG10
PTPRE
UCHL5
RO60
SRP68
TIGD6
HMGXB3
PYCR2
LSM11
DPH5
MTBP
MRPL13
INMT
MEMO1
GPRC5A
TRIM26
PINX1
GPAM
ZBTB4
POLR2A
DNAJC24
DCDC1
GPHN
DOCK7
BBS7
LRCH4
FBXO24
METTL9
MRPL58
HEATR5A
RSU1
CLPB
POFUT1
PLAGL2
PCNX4
STOML2
RABGGTA
VASP
IVNS1ABP
C12orf66
NFIL3
USP38
SMAP2
EGLN3
FAM107B
CTSC
SCAND1
TGFBR2
UBE2D3
SRSF1
RRP8
ILK
PRDX1
WDFY1
PLK2
DPY30
ATP13A3
RBM17
TCTEX1D4
BTBD19
ELOVL6
RCOR3
PTK6
SARAF
TVP23B
RIPK1
TMEM14C
GINS4
SPRYD7
RTTN
TFIP11
BNIP1
PDPK1
NR1H2
IRX2
C5orf38
COL12A1
ADAMTS9
TIPARP
SRSF5
METAP2
PSME3
SCFD1
MMAA
H1-10
AP2A2
PDS5B
PRRG2
NOSIP
C5orf34
SREBF1
MEPCE
ZCWPW1
BOD1L1
DDX46
PTDSS1
MTERF3
DHX8
DHDDS
DOHH
ATP5MPL
CYP20A1
METTL21A
ZNF131
UQCC3
LBHD1
TINF2
SVIL
SMAD4
STEAP2
LTBP1