ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662636 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◣ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PGK1
SPATC1L
SP2
TEPSIN
NDUFAF8
RAB5B
ARRDC4
DOLPP1
DNM2
OSBP
P4HB
KATNB1
STIP1
ZNF687
NLK
UBE2C
TOP2A
SP1
TCERG1
GOT1
G3BP1
TDRKH
EVI5L
ACTL6A
ANKHD1-EIF4EBP3
ANKHD1
GLRX5
RFX1
STT3A
TUBB4B
HSP90B1
ARID4A
EIF2AK3
ATP5F1B
KAT7
PXMP4
HSPA5
SKA2
PRR11
HNRNPUL1
RFWD3
SHC1
CKS1B
TMX2
MED19
PRR14
TMEM60
PHTF2
TOM1L2
DRC3
ZFYVE21
XRCC3
TMEM94
MVD
JUP
RECQL
GOLT1B
SNRPF
DROSHA
C5orf22
RBM27
ELOC
TEDC1
SPSB3
NUBP2
ARNTL
CIC
HNRNPC
LRRC45
CENPX
H2AZ2
MSANTD4
TMEM218
KIAA0319L
NCDN
MPV17L2
ARMC1
YIF1A
ATP5MC1
TRAF2
ILF2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TOMM40
FAAP24
CEP89
MAF1
KAT6B
OS9
PRKACA
MTMR4
PWWP2A
KPNB1
MTMR12
PDK2
CNOT1
TBC1D10B
MYLPF
PGP
XAB2
GPR108
FLAD1
IMMP1L
ELP4
KHSRP
COQ8A
ZNF77
AKR1E2
RPLP0
TBCCD1
DNAJB11
FAM72D
FAM72C
SLC25A25
NAIF1
CAMTA1
SPAG7
HNRNPL
EEF1AKNMT
SARNP
ORMDL2
MPND
FAM72A
CDC23
GOLPH3L
VIRMA
PSMD4
COPZ1
PROSER3
HSPB6
HGS
ARL16
TCF19
CCHCR1
PPWD1
CENPK
MAEA
PPP1R3F
RAD51B
METTL17
ANAPC5
YJU2
TICRR
ALKBH7
DCTN4
WDR25
WARS1
SERP1
EIF2A
PHB
LRCH4
FBXO24
SSR3
FDPS
NFATC2IP
NUMB
MTR
ETF1
C16orf95
GBF1
SEL1L
ARL17B
ARL17A
ZBTB3
CENPF
TMPO
AGPAT1
RNF5
MANF
DNAJC14
KDM4D
CWC15
SRP9
PRPF40A
ARL6IP6
TMEM217
TBC1D22B
HMGCS1
GATAD2B
MTFR2
ZNF695
LENG1
ANP32A
MNS1
ENSA
BCAS3
PANK2
PNPO
VPS26B
NCAPD3
MORN4
FRYL
MSMO1
H2AC19
H2AC18
UTP23
FAM161B
COQ6
MLH1
EPM2AIP1
IARS1
ABHD2
HBP1
AK2
POGLUT2
BIVM
KHDC4
DCUN1D4
CALR
PRRC2B
CCDC77
NCBP2AS2
NCBP2
ZSWIM4
POC5
NDUFS8
CHCHD6
TARS2
UBE2T
TTLL5
ERG28
ZBTB5
ZSWIM3
ACOT8
CNOT3
ZNF680
KDM4B
PSMB3
VCP
SPTLC2
PAN2
ECT2
TSACC
CCT3
RUBCN
ZNF785
WDCP
UMAD1
UBALD2
BABAM1
NDUFA2
IK
TMEM160
BRIP1
HACL1
BTD
RAB11B
ZNF691
HMGCR
ANP32E
GLCCI1
WBP1
CBX5
HNRNPA1
MSTO1
STIL
RBM48
PEX1
GATAD2A
BRAP
ACAD10
FBH1
ANKRD16
ZDHHC16
EXOSC1
TROAP
DDA1
MTOR
GSK3B
NGDN
NUDT2
KIF24
IVD
SIN3A
CKAP5
MCCC1
CYTH2
HNRNPAB
STK40
AP3M2
UNG
MYH10
H2AX
MTRR
FASTKD3
SIVA1
ATP5PD
ZNF688
RWDD1
DDOST
RBM42
FAM126A
WDR89
RPS20
MCM3
PCNX3
CCDC146
MAP3K3
NABP2
INCENP
CYCS
RAB4B
CHCHD2
ISOC2
H2BU1
H2AW
RGMB
FAM111B
GFM1
LTN1
SLC25A42
ALKBH3
C1orf109
ASF1B
THAP1
ACAP2
CDKN3
BPGM
SDHD
RPL27
TXNIP
WDR45
FRMD5
ZSWIM1
ZMAT2
CFAP43
MCM10
ZNF143
USF3
DDX49
COPE
ZNF718
ZNF595
PRDM10
DCAF15
PODNL1
PAIP2B
CHD6
NDUFAF2
ERCC8
H3-3B
CCDC66
DDX39A
FKBP14
ARHGAP19
CANX
ABCB8
FAM72B
DICER1
GOLGB1
ZNF493
ZBTB26
KANSL2
FBXO5
KCNAB2
CCT7
PRADC1
RPS5
SLC33A1
TRAFD1
NRL
DCAF11
FAM156A
ZNF727
CDR2
IBTK
EIF4A1
STARD3NL
ABL1
TRAPPC6A
BLOC1S3
HDGFL2
HINT2
MON1B
RBM15
TXNL4B
DHX38
SETD3
CCNK
ZWINT
CEP131
ATP7B
ALG11
TTC14
CYB5B
ZNF775
BUB3
WBP1L
MRPS28
NUCKS1
NFE2L1
CYLD
SLC25A28
SPRING1
RNFT2
GET3
RAB3A
NEMP1
RPS26
IGSF9B
MFSD11
SRSF2
SAMM50
AGFG2
ZNF519
PPOX
RBM14-RBM4
RBM14
LMAN2
SPC25
MRPS30
FDFT1
MRPL24
CDC25C
CKS2
UVRAG
RTRAF
PPP6R3
SNRPE
PCLAF
DHX8
TNRC6B
MXD1
TOM1
PRMT1
PICK1
PMS2
AIMP2
YIPF4
PPP2R1A
POP5
SLC25A19
CNPY3
PNN
GLO1
UBP1
ZBTB6
NUF2
CCDC130
OPA3
NDUFB3
FAM126B
KLHDC10
LAPTM4A
CCDC61
WDR46
PFDN6
OXNAD1
DPH3
HSD17B12
CGGBP1
ZNF654
TPRKB
F11R
DLGAP5
PDXP
DCP2
BUB1
BRCA1
GID4
ATPAF2
INTS3
GGCT
GRK6
TOGARAM1
KLHL28
EIF1AD
BANF1
PABPN1
ZNF555
KRR1
GINS2
SPRYD3
SF3B5
CDC6
NUP107
ZNF574
VPS35
RNF181
FCF1
AREL1
EIF3F
MTRNR2L8
PPP2R5A
AP2A1
PCNT
C21orf58
LAS1L
NDUFB5
MRPL47
RRBP1
ESR2
DPH2
KDM4A
LCMT1
RTN4IP1
QRSL1
CDK5RAP3
ZSCAN20
ASPM
PCBP2
RAP2A
ERI3
POLR1H
CSTF1
AURKA
LINC02210-CRHR1
HLTF
ZFAND2A
TYK2
ZBTB9
H4C12
DUSP10
ZNF564
RAP2B
TCP1
MRPL18
TESK2
TMBIM6
PEX2
H2BC14
H2AC14
VBP1
SLIRP
ALKBH1
SIRT2
NFKBIB
DNAJB5
JPT1
TPRN
PSMA5
LMCD1
SCNM1
LYSMD1
FAR1
NME7
BLZF1
NOL6
CENPA
TMA7
CCDC51
PPM1B
GINS1
MFAP3
FAM114A2
GPR137
CHCHD3
ACTN1
TOMM40L
RUVBL1
LETMD1
GHITM
POLR3A
ZNF141
RNF34
CDK5RAP1
PDIA4
MVK
FAM156B
ALG10B
C22orf39
EDEM3
PA2G4
INTS1
USP16
ELK1
ENPP5
METTL25
CCDC59
KMT5C
SCAI
PRCC
SOX4
BBX
ANAPC15
RAB5C
FAM204A
LRIF1
KMT5A
SELENOH
CAND1
RAB6A
EHBP1
CREBRF
ZMYM5
INTS4
PHF14
PCYOX1L
TRIM68
PGBD4
EMC7
SDF2L1
PPP2R5E
KIF20A
BRD8
TIMM17A
DDT
NEU1
SLC2A8
PHF12
CDC20
HSPA2
WDR74
PIP4P1
CDKL3
SLC39A9
ERH
TPCN1
IQCD
LSG1
LIN52
ALDH6A1
PPP1R12B
NUDT5
CDC123
BAZ1B
MRPS23
FAM117A
MBD1
FAM83D
H2BC4
H2AC6
ZNF724
DCAKD
NMT1
PGAP3
ERBB2
KCTD9
CDCA2
RBM4
USP42
FRG1
PIN1
BLM
TSPYL2
HIBADH
SRPRA
HAGH
FAHD1
RABL3
GTF2E1
OGFOD1
NUDT21
ZNF736
AURKAIP1
TFB2M
CNST
LCA5
RLN2
PC
PRPF6
ATP6AP2
H2AJ
MORF4L2
CEP164
HMGB2
XRCC4
TMEM167A
RLN1
RBM39
RPL13A
GSTO2
ZNF556
TMEM41A
STAT2
FAM222B
TUT1
CENPM
TXNDC16
EXOC4
DGLUCY
RPS6KA5
SELENOI
ADGRF3
TAF8
MIA3
HMGB1
LARS1
OSCP1
C5orf51
IDI1
FRA10AC1
PARL
LOC101927572
ALKBH6
TIMMDC1
PARPBP
NUP37
FDXR
NUP214
H2BC12
H2AC12
PSMA3
FANCF
ETV5
STARD4
PDCD6
OXLD1
CCDC137
PMF1-BGLAP
PMF1
LAMTOR4
OTUD6B
CLNS1A
RPL37
HYLS1
C2orf42
CYB5A
PSMB7
SCOC
MDM1
GORAB
SON
GART
H2BC13
H2AC13
MED30
ARL6IP1
C12orf29
TULP3
DDX50
SASS6
TNFAIP1
IFT20
CD2BP2
ROMO1
KCTD16
YIPF5
FAM76B
CEP57
NRDC
MRPL16
H4C14
H4C15
KBTBD8
CSTF3
CFAP45
WDR53
FBXO45
SF3B2
SNRPG
MIIP
ATG2A
CSNK1G3
MZT1
BORA
DMXL1
MRPL11
TSR2
MPHOSPH8
TFAP2C
PARP3
RRP9
YWHAQ
TTBK2
NPAT
ATM
PAF1
MED29
EIF3M
OXSR1
PLPBP
STAT3
SLC30A9
TOB1
SNRPA
C19orf54
FNBP4
ZCCHC9
ZNF430
MAMSTR
VCPIP1
C8orf44-SGK3
ING1
PGD
FAM111A
HSPA8
ZDHHC12
PTBP1
TTC33
DDX10
BORCS7
GTF3C5
ZNF774
WDR3
GDAP2
EIF3D
TAF1A
TMEM183A
ELAC2
RPAIN
NUP88
CCDC15
SLC46A3
HINFP
CRNKL1
CFAP61
ALDH3A2
ISY1-RAB43
ISY1
H3C2
ANXA6
C10orf143
IL6ST
HJURP
TTI1
RPRD1B
WDPCP
MDH1
UFD1
CDC45
ATG4C
NUP42
SWSAP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
NUP85
CACTIN
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
VDAC2
DYNC1LI2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
BLCAP
DCTN1
REXO1
TSNAX
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PNO1
PAK1IP1
C6orf52
RBBP5
PES1
UPF2
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
RBKS
BABAM2
TTC8
SUPV3L1
DPH6
IQCG
SART3
GOLGA5
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
TM9SF1
NEUROG2
DDX39B
ZGPAT
ARFRP1
LRR1
NEUROG3
PIN4
NDUFA10
OAZ3
SUCLG1
PTGES2
UBE2I
HES1
PDE12
MTRNR2L2
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
RARB
VEZT
FGD6
RPL7
RDH10
SEC11C
EIF2S3
GADD45GIP1
BICRA
CDC73
FLOT1
PMAIP1
C16orf91
HOXA4
RPN1
NDUFS7
GTF3C4
DDX31
SH2B1
NEUROG1
ATOH1
CNPY2
CCDC200
RARA
DHRS3
BNIP3
ZNF383
BBS9
IGFBP2
MRPL38
NEURL2
CTSA
GLT8D1
PDHX
APIP
TTI2
ZNF746
PCBD2
HOXA2
ANKLE2
TPRA1
NBAS
ID2
MINDY2