ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662634 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◣ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
SP2
TEPSIN
NDUFAF8
DOLPP1
DNM2
ARRDC4
OSBP
KATNB1
RAB5B
SP1
STIP1
P4HB
ZNF687
RFX1
NLK
ANKHD1-EIF4EBP3
ANKHD1
EVI5L
UBE2C
ACTL6A
TOP2A
GOT1
GLRX5
G3BP1
ARID4A
HSP90B1
STT3A
TMEM94
PXMP4
EIF2AK3
SKA2
PRR11
TDRKH
JUP
TCERG1
MPV17L2
ARNTL
SNRPF
ATP5F1B
RBM27
KAT7
PRR14
ARMC1
HNRNPUL1
TMEM60
PHTF2
HSPA5
TMEM218
TBC1D10B
MYLPF
TUBB4B
DROSHA
C5orf22
H2AZ2
PGK1
MTMR4
ILF2
TRAF2
MSANTD4
ATP5MC1
TMX2
MED19
MVD
CIC
FLAD1
ZFYVE21
XRCC3
HNRNPL
PDK2
RECQL
GOLT1B
KIAA0319L
NCDN
TEDC1
SEL1L
HNRNPC
COQ8A
MPND
CHCHD6
MAF1
PSMD4
RFWD3
TOMM40
VIRMA
TOM1L2
DRC3
ANAPC5
SERP1
EIF2A
SHC1
CKS1B
METTL17
FAAP24
CEP89
KPNB1
ALKBH7
FAM72D
FAM72C
C16orf95
OS9
ELOC
EEF1AKNMT
SPSB3
NUBP2
FAM72A
TBCCD1
DNAJB11
KAT6B
GPR108
ZNF77
TARS2
KHSRP
SPAG7
ZSWIM3
ACOT8
SLX1B
SLX1A
BOLA2B
BOLA2
PRKACA
PPWD1
CENPK
AGPAT1
GBF1
RNF5
TMEM160
IMMP1L
ELP4
PGP
PROSER3
HSPB6
SARNP
ORMDL2
CAMTA1
AK2
PWWP2A
UNG
NFATC2IP
MTMR12
INCENP
NUMB
SLC25A25
NAIF1
NCBP2AS2
NCBP2
UBALD2
ZNF143
ABHD2
BOLA2-SMG1P6
AKR1E2
TICRR
AP3M2
DNAJC14
CENPF
SPTLC2
ATP5PD
CNOT1
ABCB8
YIF1A
PRPF40A
ARL6IP6
LRRC45
CENPX
FRYL
PAN2
KHDC4
GOLPH3L
HBP1
CCDC146
CNOT3
DCUN1D4
ZWINT
H2AX
MANF
COPZ1
ZSWIM4
MAEA
BCAS3
NUP107
ZBTB5
SRP9
LRCH4
FBXO24
FDPS
DCTN4
ENSA
MSMO1
NDUFB3
FAM126B
XAB2
RAD51B
ANP32A
RBM42
ZNF688
TMEM217
TBC1D22B
CYB5B
TYK2
SIN3A
NDUFA2
IK
GOLGB1
KDM4B
YJU2
PHB
CDC23
ALKBH3
HGS
ARL16
ETF1
CGGBP1
ZNF654
CBX5
HNRNPA1
PAIP2B
PRRC2B
INTS4
SIRT2
NFKBIB
MTFR2
TMPO
MTR
MSTO1
ISY1-RAB43
ISY1
SPRING1
RNFT2
PNPO
PPP1R3F
IARS1
MAP3K3
WDR25
WARS1
RPLP0
BUB3
FAM126A
UBE2T
WBP1L
WDR89
POGLUT2
BIVM
BRIP1
CALR
SSR3
ZSWIM1
ZMAT2
NFE2L1
SLC25A42
MCM3
RBM48
PEX1
TROAP
FAM161B
COQ6
MORN4
PPP2R5A
ECT2
PSMB3
ZBTB3
IGSF9B
CENPA
THAP1
CYCS
MLH1
EPM2AIP1
LMAN2
NRL
DCAF11
FKBP14
F11R
CHCHD2
CEP131
ZNF718
ZNF595
GPR137
ACAP2
RAP2A
ZNF519
NUF2
IBTK
WBP1
UBP1
H2BC12
H2AC12
GATAD2A
H2BC13
H2AC13
SLC33A1
GLCCI1
DDOST
RPS20
ABL1
LENG1
DDX49
COPE
LARS1
PANK2
WIPI1
TCF19
CCHCR1
CDKN3
USP16
ZDHHC16
EXOSC1
KDM4D
CWC15
HMGCR
UVRAG
KLHDC10
SCNM1
LYSMD1
FRMD5
BABAM1
TNRC6B
NDUFAF2
ERCC8
HMGCS1
DNAJB5
RAB4B
ZNF555
CNPY3
KANSL1
MYH10
TIMM17A
EXOC4
SRPRA
H2AC19
H2AC18
NUDT2
KIF24
WDR74
NABP2
ZNF691
FDFT1
PDXP
TMA7
CCDC51
VPS26B
NCAPD3
POC5
NME7
BLZF1
LINC02210-CRHR1
OPA1
RPL27
VCP
CKS2
ZNF785
LOC101927572
ALKBH6
PCNX3
CHD6
MAP3K11
BOD1L1
EIF5
DICER1
PCYOX1L
PDCL
STARD4
RAB11B
SPC25
FBH1
ANKRD16
TXNIP
ISOC2
INTS3
DCAKD
NMT1
TTLL5
ERG28
KRR1
FRA10AC1
HYLS1
DHX8
LTN1
GSK3B
PARPBP
NUP37
ZBTB9
ZFAND2A
STIL
TSACC
CCT3
WDCP
PRMT1
SPRYD3
HNRNPAB
DDA1
LCMT1
RARS2
ORC3
HAGH
FAHD1
C1orf109
DLGAP5
TOM1
KMT5C
BRAP
ACAD10
STAT2
RTRAF
NGDN
ENPP5
FAM72B
KIF20A
BRD8
H3-3B
ASF1B
SETD3
CCNK
LAPTM4A
CYLD
EDEM3
PICK1
TRAFD1
FAM156B
FAM156A
USF3
TOGARAM1
KLHL28
RBM8A
RAB3A
SAP30L
GATAD2B
TPD52L2
AP2A1
KCNAB2
GFM1
MNS1
RUVBL1
LETMD1
CDK5RAP3
NUCKS1
ZNF57
WDR45
SLC2A8
PSMA5
EIF1AD
BANF1
TMED10
SLC25A28
SNRPA
C19orf54
CCDC77
RUBCN
DGLUCY
RPS6KA5
ARHGAP19
PDIA4
RMI2
TXNL4B
DHX38
XPO1
ETV5
RGMB
STX18
DDX39A
PIP4P1
HIBADH
TPCN1
IQCD
GMNN
UMAD1
NEMP1
ZNF626
KLF6
ANP32E
TTC14
TIMM10
ALG8
PPOX
CKAP5
DPH2
VBP1
STK40
TMEM248
RBM14-RBM4
RBM14
UTP23
RRBP1
H4C12
MCCC1
PPM1B
TTC16
PTRH1
JPT2
PAF1
MED29
ZNF564
CREBRF
FBXO5
SF3B5
MRPL24
LAS1L
TMEM97
RWDD1
PMS2
AIMP2
RPS21
RPL18A
SDF2L1
YBX1
EIF4A1
PHF12
RRN3
TCTN3
TIMMDC1
RPN2
MROH8
FAM204A
TPX2
KLHL20
PSMA3
BAZ1B
TTBK2
ASPM
MDM1
DDT
GGCT
DDTL
THYN1
ACAD8
ZMYM5
H4C5
GET3
RTN4IP1
QRSL1
WDR81
ZNF8
TXNDC16
CKAP2L
HSD17B12
MCM10
ZNF695
TIMM23
NEK2
CALR3
C19orf44
OTUD6B
ZCCHC17
SNRNP40
NOL6
RBM15
ARL17B
ARL17A
PLPBP
ESR2
STX16
SLC25A19
SAMM50
YIPF4
SSBP1
MRPS30
MAP3K13
ZNF141
ZNF727
MVK
TPRKB
TMEM45A
GHITM
WDR53
FBXO45
PABPN1
CFAP43
PEX12
CIART
ATP7B
ALG11
TMCO1
DCP2
NDUFS8
RAD54L
POP5
ZBTB6
PNN
MZT1
BORA
PC
CCDC66
MFAP3
FAM114A2
ZNF574
PPP2R5E
SAP30BP
RECQL5
EFCAB6
ALG10B
BPGM
CCT7
GRK6
PRADC1
DCLRE1C
ERI3
BUB1
PMF1-BGLAP
PMF1
DNAJC25-GNG10
DNAJC25
ZNF680
CWF19L1
FAM117A
KBTBD8
ZNF91
ZBTB26
FAM222B
EIF3F
DAZAP2
RAD54B
RND1
ZNF774
ZNF384
SCAI
TWNK
MRPL43
COX14
FNBP4
SYS1
PTBP1
VPS4B
WBP2
OXSR1
LMCD1
PRCC
PARP3
RRP9
KIF1B
OTUD5
ZC3H10
PGBD4
EMC7
OSBPL9
MON1B
FAM83D
EIF3M
RPL37
EHBP1
KDM4A
WHAMM
H2BC21
H2AC20
BLM
SLC46A3
RBM39
CDC6
PRPF6
ANKZF1
WDR46
PFDN6
DCAF15
PODNL1
GABPA
ATP5PF
H2BU1
H2AW
NUDT16
DDX41
ANXA6
TNFAIP1
IFT20
CTNNBL1
NF2
CD2BP2
SENP2
RLN2
OTUB2
CAND1
CLNS1A
ATF7-NPFF
ATF7
SZT2
MED8
DNAJC19
IVD
TIPRL
EIF2B2
SELENOK
ZNF830
CCT6B
ZNF408
ARHGAP1
SLC25A32
DCAF13
GINS2
GINS1
ANAPC15
FER
GTPBP4
CIT
PA2G4
SIVA1
TYW1
TTC33
AAR2
ORC2
SF3B4
CCDC61
C5orf51
HACL1
BTD
SLIRP
ALKBH1
ELK1
H4C3
UGP2
ZNF775
NHP2
PSMA6
MYH14
FRS2
MBD1
SNRPE
VTA1
NMBR
C22orf39
XRCC4
TMEM167A
RLN1
ZNF302
RNF34
SMG5
KIF18B
RPS26
DNAJC24
DCDC1
ZNF138
CBWD5
CBWD3
TFB2M
CNST
STARD3NL
CEP164
GSTO2
NUDT5
CDC123
CANX
TTC31
COQ7
CCDC142
RNF181
HEXIM2
SCOC
FUT8
KCTD16
YIPF5
TMBIM6
ARL6IP1
FAR1
LOC100421372
HSPA14
CDNF
PUM3
RAB3C
RPS7
SETD5
PARL
ETFDH
C4orf46
MTOR
ZNRD2
PSMC3IP
PPIP5K2
H2BC15
H2AC15
PSPH
CCT6A
SLC25A36
SNRNP200
MED30
ARAF
LIN52
ALDH6A1
SF3A3
SFXN5
UQCC1
MFSD11
SRSF2
C6orf89
TESK2
BMS1
TMEM256
PI4K2A
MAT2B
ADAMTS15
CDC25C
MRPS28
SLC39A9
ERH
MYG1
CSTF1
AURKA
DDX50
HJURP
OSCP1
ZNF85
TTK
COG3
CCNB2
COX16
TMEM183A
CCDC174
SCAND1
NUP214
RPS14
TUT1
ALG10
TRMT10C
H4C11
IDI1
CDK13
TM2D2
ADAM9
DARS2
CENPL
MRPS23
TAMM41
ZSCAN30
GTF3C5
OPA3
CNNM2
GORAB
RABL3
GTF2E1
METTL25
CCDC59
NUMA1
LRTOMT
KNOP1
TRAPPC6A
BLOC1S3
SEC23B
ING1
ZNF107
PPP6R3
CENPM
STAT3
DCBLD2
WBP11
C12orf60
LNP1
TOMM70
SDHAF2
CPSF7
PEX2
EMSY
BBS10
RPL13A
PCF11
CROT
ZNF273
UTP25
PSMD3
SNRPD2
QPCTL
C10orf143
NUP42
VPS35
CCDC90B
DEPDC1
TARS1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
NUP85
CACTIN
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
VDAC2
DYNC1LI2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
BLCAP
DCTN1
REXO1
TSNAX
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PNO1
PAK1IP1
C6orf52
RBBP5
PES1
UPF2
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
RBKS
BABAM2
TTC8
SUPV3L1
DPH6
IQCG
SART3
GOLGA5
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
TM9SF1
NEUROG2
DDX39B
ZGPAT
ARFRP1
LRR1
NEUROG3
PIN4
NDUFA10
OAZ3
SUCLG1
PTGES2
UBE2I
HES1
PDE12
MTRNR2L2
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
MTRNR2L8