ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2635936 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◣ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

XKR7
NPAS4
IQSEC3
SLC45A4
NHLRC1
AIFM2
GLRA1
ANKS4B
NEURL2
CTSA
NFE2
DUSP9
RNF207
NAT8
DONSON
HTR5A
PDE12
LCK
ZGPAT
ARFRP1
DAGLB
RARB
ADAP1
LBX2
CPLX2
CELSR3
RHBDD1
IRS1
CRLS1
ROGDI
IL27
TMEM86A
L1CAM
SLC30A4
FGA
ANKRD28
CMSS1
FILIP1L
TRIM44
RAB37
IRF9
GPCPD1
HAL
ETV4
PLEKHA7
EPHA10
FASTKD1
CBS
FAM107B
MACROH2A1
BHLHA15
AGT
PIWIL2
NEDD9
ADGRG3
PDE4D
CST5
ERRFI1
C4BPB
GGT1
TIGD2
CX3CL1
SH2B1
MINDY2
PCK1
ALKBH7
GLT8D1
A2M
BARHL1
MAPK8IP2
LEKR1
NR1I3
HPCAL1
RASSF6
F2
SLC51B
OTUD7B
NDUFS7
APOB
AMBP
NRSN2
AKAP1
TRIM74
SHFL
MTRNR2L2
SEPTIN9
RMND5A
RCL1
SERPINE1
ERBB3
SREBF1
TOP2B
BAIAP2
CHGB
ITPK1
STAT5B
NQO2
FLOT1
TUBGCP3
RBKS
BABAM2
UAP1
NRL
DCAF11
SERPINB9
PHF8
SNAP25
SMARCD2
KRT8
TNFSF4
PLTP
C3
SST
MOGAT3
SLC25A47
EIF1B
FABP1
C3orf86
RTN4
PPCDC
TANK
LDLR
ZNF503
G6PC
TMCO6
BDH1
PFKFB1
SH3PXD2A
HPN
SEMA4G
CYB5R4
TMEM9
EBF4
ABCC6
H4C3
TRNP1
HERC5
WDR74
IL17F
HNMT
ARFGAP2
VTN
SARM1
PIM1
WNK4
APOA1
ACOX2
PACSIN3
DLC1
ZNF101
ALDOC
KAT6B
SCAP
MRPS31
VAMP5
C1RL
TOP1MT
PRUNE1
MINDY1
TARS1
LOC100289561
KPNA7
MAOB
BCL6
LONRF3
OTUD4
SEC23A
IL6ST
MTRNR2L8
AGMAT
UGT2B10
NANP
EEF1B2
TF
C6orf136
A1BG
TSPAN4
TCIRG1
NFKBIA
TTC39C
LRG1
SOAT2
CCL15
ADGRA1
MGST2
LHFPL5
LOC110384692
C4B_2
C4B
C4A
CYBA
TRIB1
PKP4
ECH1
NGEF
DSP
APOM
CLK1
MRPL2
KLC4
MRPL4
SERPINA6
SOWAHD
SYCE3
AKTIP
DHRS3
RPS6KB2
UROC1
NKD1
CDIP1
SUN2
NT5E
NLRC4
MED9
CES1
RNASET2
TINAGL1
CEP70
KANSL3
ARSB
ZBTB7C
MIA2
CSF3
TTI2
CHRNB2
ITIH3
CYP19A1
APP
NR0B2
IQGAP2
PANK2
RBP4
MMP24
APOA2
ANGPTL8
TXNDC11
CCL20
CFB
DDC
HSD3B7
EPS8L2
DEAF1
ANXA9
ZBTB38
NFILZ
VNN3
STMN3
NPPB
CYP1A1
E2F3
NRSN1
MAMSTR
CHRM4
STX18
SCRT1
FYB2
GDAP1L1
SLC12A5
GABARAPL1
RAB17
TMBIM6
MNX1
SRCAP
LOC730183
APOA5
ROBO4
USP42
UNC93A
RNF213
TRIM31
ACYP1
ZC2HC1C
CLCN3
TMBIM1
DNAJB1
BCAS1
SLC25A36
HES3
AJUBA
RARA
EFNA1
TWF2
MBL2
FAM169A
FOXA2
SERPINF1
IL1RN
NTSR2
GRM1
CCN2
RBMS1
PRRT1B
PTPRN
TLN1
CREB3
CYP3A43
RNASEH1
MARCHF4
SERPINA11
PPP1R13B
CCDC174
PDGFB
PCNA
CDS2
SH3D19
INHBE
ACY1
PLEC
MAF
SELENOP
NR1D1
PLOD2
SERPINF2
MDM2
KMT5A
HAAO
HPCA
SRRM3
GRB7
ZNF292
SPINK1
BHLHE40
CNOT2
LRMDA
HECTD4
TMEM181
UBAP2
FUT5
PUS10
PEX13
COX5A
SLC25A10
MTHFD1L
SDCBP2
TLE6
GBE1
AMOTL2
SLC22A9
SLC7A6
SOD2
WTAP
MYDGF
MMP15
UNC80
VGF
OGDHL
PLIN2
GDPGP1
CIB1
SAXO2
EFL1
SLC26A1
TTC31
RFFL
ANKRD1
TCTEX1D4
BTBD19
IBTK
SPIN1
GFOD1
CDK5RAP1
APOL1
SVOP
ZNF44
KATNA1
CPT1A
PPM1H
PGBD5
MAP11
IL15RA
MASP2
NDUFAF5
ESF1
SPRY1
HINT2
ANK1
PIKFYVE
DYNLT1
ADRM1
CHGA
ACSL5
PACSIN2
ETFDH
C4orf46
PDE1C
ADM
PCYT2
SORT1
PTGFRN
FOXP1
DEPP1
VWC2L
UMPS
KIF21B
TBL1X
TMEM19
FAAP24
CEP89
ELOVL6
TRIM50
TFF1
ACADM
NR2F6
STAT3
ARHGEF16
LGR5
CCDC92B
ZNF225
GPT
MAPKAPK3
CISH
SLC7A5
MTRNR2L9
FGL1
AHCY
URB1
CFL2
CFAP69
LRP10
AGXT
ATG2A
LPCAT3
GSTO1
SCRT2
LCAT
TRAF4
TRMT2A
RANBP1
BCAR1
SKIL
OSBPL6
COMT
UPF3A
HUS1
NOM1
HERPUD1
MAP2K7
EXOC3L4
TTC6
FOXA1
HRG
DSC2
APOC3
TMEM51
FCGR2A
CACFD1
SEZ6
SPATA2
IL13RA1
ARHGAP4
PTP4A1
USP31
TK1
AFMID
TLE3
SERPINB6
TACO1
TTC39B
ACTR6
CYB5A
LYZ
KBTBD2
SLC39A3
SSUH2
ANGPTL1
MTHFR
CLCN6
RASSF10
KRTAP3-1
SERPINA1
GATD3B
GATD3A
CRKL
PRODH2
CTDSP2
GIPC2
KCNK12
ASAH1
BOLA3
HOXA3
ZNF219
ARRB1
SRARP
LONP2
ABCC11
STAP2
RARG
SPATA1
EGLN2
FDXACB1
C11orf1
IDH1
PRR5
SLC20A1
MTRF1L
RAD50
CPT2
LRRC59
HSF4
MYADM
ACACA
ZNF670
SLC23A2
IST1
SLC25A45
CDKN2D
STX16
HPR
PNKD
ORAI3
GLTPD2
AMPD2
GNAT2
ZNRF1
KCNH6
SETBP1
PERP
CYP7A1
LRRC25
OSBP2
TRIM40
ZNRF3
USP43
MFSD8
ABHD18
DNPEP
KIFC3
GPATCH8
NCOA4
GCKR
ARGLU1
NBR1
ASGR2
PHF10
CLUAP1
ACAT2
TBP
PSMB1
RANBP3
BAG2
DNAJC6
CDC14B
BATF2
C2
CD14
ACSM2B
GJA10
SCAMP5
RBM28
C8A
ARL14EPL
COLEC11
PMPCB
UBR4
IRF2BPL
DKK1
ANPEP
SBK3
MRPL36
SHANK2
POM121
SCOC
HP
CHD9
CHST15
SLC35D2
MST1
ATXN1L
THUMPD3
TJAP1
TECPR1
SLC16A5
SEC14L4
SMAD7
MPV17L
RHOBTB3
HPX
PRAP1
GCN1
PFKM
SNAPC1
AHSG
PDE4C
CABLES2
ACSM2A
LCN15
LFNG
TIMM13
NMNAT3
GOLGA6L2
BRD2
ZNF512B
SULT1A4
SULT1A3
SLC11A2
HIGD1A
SEC24A
SULT1A1
SULT2A1
TMEM102
IKZF3
SMIM20
ARSF
CLK2
LOC112577592
NOL3
PROZ
DCAKD
NMT1
KDM3A
CHD3
ZNF165
FAM102A
NDE1
MARF1
F7
ST6GALNAC6
PC
CPVL
CASP9
CLDN14
CRH
SHH
CHID1
MVD
NDRG2
NME2
SLC25A19
MTF2
CWC25
MICOS10-NBL1
MICOS10
SHB
TJP2
MBD6
MTERF4
PDHB
CRK
SERPINC1
BSG
LOC388282
TNFRSF12A
SAR1B
NEK2
NKIRAS1
NR1D2
GFER
EPAS1
GRAMD1A
CMTM8
NSUN5
DLG4
ACADVL
CERS4
SRI
NGLY1
OXSM
MXRA7
SCGN
CCL26
PRMT5
SHBG
SAT2
FUT6
ARIH2
SIRT1
ZCCHC3
PTPRS
PLXNB2
KLF11
CSTF1
AURKA
IGSF23
PLEKHM3
GNG4
UBXN6
RPL37
PLEKHG6
PRXL2A
METTL3
ARHGEF40
SLC39A9
ERH
DNASE1
USP32
SLC19A3
ATP5MC3
ATP7B
ALG11
MIEF1
OPA3
GGACT
HGFAC
EAPP
RASSF5
PIP5K1C
SEPTIN2
HDLBP
ASB1
ATXN2
RBM7
C11orf71
TTC3
DGKD
HIBADH
S100A16
FITM1
EML2
ICAM1
SCO2
MAGOH
EPM2A
BRI3
KRTAP2-3
RFC5
SEC62
SP5
MTIF2
DNMT3A
SLC2A4RG
DBI
C2orf76
TTLL9
CBFA2T2
SLC30A6
U2SURP
LYPD2
SLC25A13
C16orf70
KNOP1
ZNF746
TMEM123
ACSL1
SLC25A21
STRA8
KRT18
NEU4
FRA10AC1
PCK2
TCEA2
PCCA
PPARGC1A
NODAL
TYMSOS
STK39
PTP4A2
WASHC2C
ACSL6
DDX1
HNRNPF
H4C12
TPH2
N4BP2L1
CIDEC
TM4SF5
SPSB3
NUBP2
GPR158
AP3B2
GPR6
BLCAP
SIPA1
SRXN1
STK11
B4GALT3
SCARB1
PLEKHN1
SEZ6L2
ASPHD1
THAP4
ATG4B
NME1
PDE8A
AGFG2
UTP14C
KRTAP5-7
SSTR5
TIGD1
EIF4E2
GREB1
TBCEL-TECTA
TBCEL
TRIM8
INTS9
HMBOX1
ATAD3C
CEP41
UBE2Q1
LMAN1
MPP2
F13B
ZNF787
EVI5
HNF1A
PON3
MC1R
PDCL3
GPT2
CALM1
ISCA1
MDP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FZD5
CUL9
IDH3B
IPO4
FOXN2
IKBKG
NOL7
ASNSD1
ASDURF
PCGF2
CLRN2
CCNL1
SLC35D1
S100A8
PLEKHB2
NPAS2
EPO
HGD
KCNH4
ARL6IP1
KLLN
PTEN
FERMT1
CHPT1
SYN3
CKLF-CMTM1
CKLF
COQ10A
PARP3
SMAP1
PDXP
STAR
HADHB
HADHA
SGTA
UBB
ABCC2
OPA1
DRG1
PMVK
NHP2
SGK2
LIM2
PARD3
FAM163B
CCDC88A
NUTF2
CENPT
FTCDNL1
SMPD3
NR2F1
CEND1
SHPK
CTNS
SLC24A1
MIEN1
LARS1
TOB2
CTSZ
CD46
TBC1D13
EPB41L4B
DCHS1
NFE2L2
PPP2R5A
MAPK11
PEX14
CYTH1
TMEM140
XKR4
HES1
CPN2
BAG6
ZNF76
ACTL6B
FBLIM1
HEXA
HERC1
SCG3
PLPPR1
GNG5
FGD4
ERI1
CLPTM1L
UTP11
PRKCZ
FBLL1
PXN
CDK6
SNRPB2
GCFC2
ZBTB43
MRPL34
PICALM
DUS2
DDX28
ABHD8
SPOP
CREB3L3
GGH
KCNB1
TRIM67
AMT
FOXJ3
SKIDA1
RBM39
CAMTA1
TPD52L2
ZNF337
ARID5B
GPR160
PLEKHJ1
ZSCAN9
EMC8
COX4I1
ACOT2
UBA52
GSTCD
INTS12
ZNF446
EDC4
TASOR2
FBXO31
ZNF395
LIN54
MAP1LC3B
PRR7
PAQR4
H6PD
ARPP19
ST20-MTHFS
ATP7A
NFE2L1
METTL9
TGFBR2
ECI1
RPL31
NET1
RRP7A
CRYM
KAT6A
SIRT4
TMEM242
MOB4
TPRN
BCL9L
STN1
ZNF444
CPNE9
STC2
PGLYRP2
RAPGEF5
DUS1L
MNAT1
OSER1
MOB1B
LEAP2
NFKBIZ
RABGGTA
APOC2
DENND4B
NDUFS3
KBTBD4
GOT2
CXXC5
RFC1
SLIRP
ALKBH1
FAM177A1
RRAS
SERPIND1
TRIP4
PDSS2
SNRPB
H4C14
H4C15
CNPPD1
HS3ST2
PGC
BZW2
HDAC2
PIM3
MCRIP1
CLVS1
AKAIN1
CTXN2
CDHR5
ADAM17
RBSN
RPTOR
MFN2
ADAR
ZCCHC7
LGI4
ZFHX3
ATP6V0E2