ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671312 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
KNL1
B4GAT1
PPP6R3
SACM1L
SHF
BCAR3
DPP9
PRMT5
LUC7L2
FMC1-LUC7L2
FMC1
H4C8
GSTA4
TTI2
FBXO31
C8orf37
CCDC107
NDUFS7
RPS29
POLG
SNX16
POLR3E
HMGN4
ANG
ELF1
WBP4
TIA1
ILF2
TRIM41
METTL26
LTA4H
NCOA7
PSMB3
CASC3
RAB11A
OR1F1
ZSCAN22
TMEM259
POLDIP3
SMARCC2
DDIT4
FLOT1
MTRNR2L2
TBL1X
HSPA6
PPEF1
MAT2A
STAT6
MED16
ZNF839
ANP32E
SAR1B
TRIP4
LASP1
MTERF4
YARS1
S100PBP
ZNF827
SIRT4
STX16
RPL37
CSRNP1
OPA1
WDR36
BZW2
ANKMY2
MTF2
ZC3H10
DHRS3
H4C12
NFE2L2
GOT2
SLC44A1
SELENOH
FRA10AC1
SLC25A45
PARP2
TRDMT1
MYC
H4C14
RAD54L2
ZMPSTE24
EIF4G2
MNAT1
DCP1A
H4C15
SREK1IP1
CWC27
HSPE1-MOB4
HSPE1
HSPD1
NME1
FAM227B
DTWD1
FBXO4
NDUFC2-KCTD14
NDUFC2
GBA
DNAH14
MKRN3
NUF2
JUNB
H4C4
GTF2H2
SF3A3
TMEM242
C12orf57
TRIAP1
RNASE4
MRPL40
HIRA
PLEKHG2
NDUFA12
SERPINE1
ZNFX1
C11orf49
LRRC59
ATF3
SLC38A2
MRPL21
IGHMBP2
FUS
LY6K
R3HDM2
C19orf53
NDUFS3
KBTBD4
TMEM248
MTHFD2L
ZSCAN9
MTRNR2L8
TPK1
H2BC18
KDM1A
ARID5B
MRPS17
NSUN4
SNX17
EIF2B4
PTPRM
GTF2H2C_2
GTF2H2C
NUP54
H4C2
CALM2
H4C3
RBFOX2
ZFP36L1
GSTCD
INTS12
H1-3
HSP90AB1
CYP20A1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
WDR24
MED23
UTP3
TOP3B
BBS1
PLK2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIB1
TACO1
GTF2A1
NACA
MLEC
MFSD11
SRSF2
HMGB1
USPL1
PSMD9
HPD
RPL28
SLC9A1
NXF1
CEBPB
SLC33A1
GADD45A
NDUFS4
C17orf75
WDR31
UBE2D3
RAB30
HES4
PSMF1
NABP1
DRAP1
C11orf68
GTF3C3
KLF7
CXCL8
LPIN3
DR1
MRPL35
PSMD3
SLC27A4
H1-4
RPL10A
NET1
SCNN1G
HTR5A
DUSP10
JUN
MCTP1
SEC11A
TBC1D19
CHD1
RPS7
H4C5
ZSCAN30
H4C11
TATDN3
NSL1
RBBP5
CLCN3
BIRC3
SPRED2
PPA2
MTERF1
SRSF7
TARS2
TRIB3
STK17A
EIF3M
EIF4A3
ZBTB40
CCNC
TUBGCP3
FAM107B
LIG3
MRPS31
PCMT1
ZNF460
SAV1
HCAR2
PSMD12
STK40
CDKN2AIPNL
PCMTD1
POLE4
ALKBH2
DNAJC2
TBRG4
FOXJ3
CCAR2
H2AC19
H2AC18
SNAP47
JMJD4
RTN4
SCNN1A
LIMS1
MRPS18C
HELQ
PHKA1
DCAF10
POLR1H
SEC31A
MGST1
TMEM158
CCNL1
TOB2
CDC42
RXRA
SUMF2
LARS2
SOD2
WTAP
ZNF770
TAMM41
CCN5
SNAPC5
EIF3B
NDUFAF5
ESF1
POLR2J3
NSFL1C
GABARAPL1
PHACTR4
BLOC1S6
ALOXE3
KANSL3
S100A2
MRPL39
POLR3B
DCAF8
DEF6
KRBA2
FAM72A
TRAP1
PCID2
CUL4A
BTG1
SNX14
HNRNPAB
NFAM1
EEF1A1
H1-2
H3C10
DMAP1
THOC3
AGK
H3-3B
NUP107
SLC30A5
RPS6
AQR
POMK
PIKFYVE
DPY19L4
COPS7B
GTF3C5
C8orf33
MEIS1
MYNN
ZKSCAN4
ASH1L
UCHL3
COMMD6
EPRS1
SUGCT
MPLKIP
ISL2
MICALCL
COMMD2
DNAJC11
RANBP2
CCT2
GNAI2
ZBTB45
ZBTB20
TEFM
SPRYD4
SSNA1
ANAPC2
ATXN2L
MBTPS2
MDH1B
FASTKD2
ASNS
PCNP
SLC16A1
TGOLN2
C12orf66
NMRAL1
HMOX2
MAF1
WDR70
FAM43A
RTEL1
ERRFI1
GEMIN5
RGPD8
RGPD5
GOSR1
RGPD6
STEAP2
NKIRAS1
SLC24A1
RPL15
GNL2
MRPL1
AARSD1
COQ2
CLUAP1
ATP5MC2
SLC35A3
CXCL3
PFKM
SENP1
ADGRG6
IMPACT
NMNAT1
LZIC
PWP1
MET
PYROXD2
EXD2
KPNB1
MRPS15
POLR2C
TTC4
HAGH
FAHD1
ZNF843
MEPCE
ZCWPW1
FBXO22
RAET1E
DSTYK
STMP1
NOCT
LSG1
SLC16A7
B3GALT4
TMEM68
TGS1
CAMK2D
MRPL44
PSMB2
AXL
MAML3
SSBP1
THOC1
NOL8
CENPP
LRP12
NOL7
WDR11
NUFIP2
MAP4K5
ATL1
H2BC10
MPHOSPH10
MCEE
WASHC2A
CPEB2
ARID2
METTL9
CDK6
ZBTB38
DOHH
ERCC6L2
BORCS7
SH2B1
EIF2D
NDUFV1
COX16
CALM1
PCCB
SFPQ
TMEM179B
RUNX1
ZNF622
METTL25
CCDC59
MRPL20
INTS5
ARL8B
RINT1
H2BC21
H2AC20
H2AC21
TOMM7
BCL7C
LAMTOR5
CES2
CIAO2B
RPL5
RCAN1
PMPCB
MRPS35
CAAP1
NR1H3
ACP2
IARS1
ENKUR
CELSR3
FAM162A
CCDC58
SLC39A13
RFFL
COQ8B
C18orf32
TBL3
TOMM5
CDC25C
SNUPN
FAM53C
CEMP1
PARL
HINT3
RRN3
RNF14
SNRPD1
RTTN
AHCTF1
METAP1
GDF15
DNAJC9
GRPEL1
TM4SF19
ELP3
CTNNB1
HERC3
TBC1D22A
PYURF
PIGY
PRDX1
CBX3
HNRNPA2B1
C5orf51
CTSC
USP8
ZNF205
PTP4A2
PHB2
HNRNPD
KCTD5
LRRC37A3
RNF138
YWHAZ
CCDC125
PARK7
SPOP
MRRF
H2BC9
TAF12
ERI1
NRF1
KIAA1958
C9orf147
TMA16
PCBP2
NANS
CCDC80
ROR1
DVL2
NDUFA4
BHLHE40
RPS27L
FUT8
BNIP1
PCDH1
FITM2
R3HCC1
POMP
RBM14-RBM4
RBM14
RHOT2
RARS1
CCDC174
CLCF1
SNF8
DNAJC10
ERCC1
KIZ
NUP214
SCAF11
ATXN2
SLC7A11
PKN2
IL1RAP
USP53
SLC38A1
SEPTIN7
MFN1
LMTK2
CARNMT1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
NUP85
CACTIN
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
VDAC2
DYNC1LI2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
BLCAP
DCTN1
REXO1
TSNAX
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
LYRM4
FARS2
SRD5A1
NSUN2
PNO1
PAK1IP1
C6orf52
PES1
UPF2
SKP1
IRGQ
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
RBKS
BABAM2
TTC8
SUPV3L1
DPH6
IQCG
SART3
GOLGA5
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
MED29
TM9SF1
NEUROG2
DDX39B
ZGPAT
ARFRP1
LRR1
NEUROG3
PIN4
NDUFA10
OAZ3
SUCLG1
PTGES2
UBE2I
HES1
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
RARB
SPATC1L
VEZT
FGD6
RPL7
RDH10
SEC11C
EIF2S3
GADD45GIP1
BICRA
CDC73
PMAIP1
C16orf91
HOXA4
RPN1
GORAB
GTF3C4
DDX31
NEUROG1
ATOH1
CNPY2
CCDC200
SP2
RARA
BNIP3
ZNF383
BBS9
KAT6B
IGFBP2
GPR108
MRPL38
NEURL2
CTSA
GLT8D1
PDHX
APIP
ZNF746
PCBD2
HOXA2
ANKLE2
DNM2
TPRA1
NBAS
ID2
TEPSIN
NDUFAF8
P4HB
MINDY2
ALKBH5
RPS10-NUDT3
RPS10
AXDND1
TBX2
CLGN
ZFHX3
DOLPP1
STX18
RAB5B
CAMTA1
DONSON
UPF3A
HSPA1B
NPAS4
ANK2
TLE4
ATF6
SP5
PDHB
CBFA2T2
OTUD7B
KATNB1
PANK2
RBPJ
PGK1
PRUNE2
SMARCD2
GATA4
MTMR4
DUSP6
HUS1
FOXP1
ZNF687
XKR7
TBX3
ARRDC4
ARSG
NRL
KIF21B
SRSF11
QPRT
ALKBH7
ST18
CNOT2
RFX1
LRRC40
HOXA3
NFKBIA
STIP1
NR2F1
OSBP
TLE2
SPCS1
RMND5A
DCAF11
INSM1
ZNF608
PDE4D
PPCDC
RARG
PCNA
IQSEC3
ZFHX4
ATP5F1B
GPCPD1
RNF207
MRPL34
SLC45A4
MDM2
KMT5A
LPCAT3
RUNX1T1
SMIM20
SP1
CS
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
EIF2AK3
HEXIM2
KAZALD1
MACROH2A1
GRSF1
NELFA
CRLS1
GADD45G
TLE6
KCNAB2
TMEM70
TNFRSF19
MYRIP
METTL11B
CCDC43
SMG6
KDM3A
DAGLB
EIF3D
RBBP7
NLK
ANKRD28
SLC30A4
COX5A
ZNF503
RAB37
HNMT
SREBF1
EIF4H
NKD1
ARHGEF10L
GATD3B
GATD3A
CEP41
RHBDD1
CDS2
PRKACA
TDRKH
DIABLO
CBX5
TMEM101
KIAA0319
EVI5L
NCOA2
ARID4A
TXNDC11
TOP2A
ID1
PNKD
SEC14L1
G3BP1
MBD2
ZNF76
BFSP1
KMT2A
PRDM10
ARHGAP4
AIFM2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
USP42
DUSP9
NRSN2
IQGAP2
RNF149
NR2C1
GOT1
RASSF2
NEDD9
SH3BP2
TMEM60
PHTF2
INAFM2
ING1
HES3
HMGCS1
IRF9
CCDC88A
ACYP1
ROGDI
CHD8
EIF1B
CPSF4L
NHLRC1
CMSS1
SCAP
ADM
EXOSC4
EPM2A
YTHDF2
ANKS4B
LCK
TSPAN4
GFOD1
TCHP
NANP
HPCAL1
NEO1
PRDM12
HSP90B1
CYB5R4
PCGF1
PCTP
ICAM1
FAAP24
CEP89
MPND
LTBR
ZC2HC1C
SEPTIN9
DLC1
TUBB4B
UBE2C
SRCAP
LOC730183
MVD
SLC25A19
BRWD1
GPATCH8
HNRNPC
TRAF4
ATP23
MPV17L2
ADAP1
TANK
LBX2
ARHGAP24
CDC42EP3
PRR14
CLK1
GLRX5
TMEM94
HNRNPUL1
IRS1
DUSP12
ARNTL
SNX3
HOXB4
ZNF148
LPIN1
TCF4
ZCCHC3
STAT3
DDX1
SHB
NCBP2AS2
NCBP2
ABHD2
TMPPE
GLB1
HECTD4
TCERG1
DNAJB1
ZBTB18
CYCS
MTRF1L
JUP
STARD4
FILIP1L
BAZ1B
KIAA0319L
NRSN1
LIN28A
HOXC5
HIBADH
ARIH2
CMTR1
ZNF740
CSAD
TOMM40
SERPINB9
MSMO1
ACVR1
GGT1